RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 CTDSPL2Q05D32 466 aa10.37□□□□□ -0.75
NEDD4-211ENST00000514893 DHX9Q08211 1270 aaKnown RBP10.37□□□□□ -0.75
NEDD4-211ENST00000514893 Q6ZVU0 165 aa10.37□□□□□ -0.75
NEDD4-211ENST00000514893 ARHGAP9Q9BRR9 750 aa10.37□□□□□ -0.75
NEDD4-211ENST00000514893 PTSQ03393 145 aa10.36□□□□□ -0.75
NEDD4-211ENST00000514893 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
NEDD4-211ENST00000514893 SLC24A3Q9HC58 644 aa10.36□□□□□ -0.75
NEDD4-211ENST00000514893 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
NEDD4-211ENST00000514893 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
NEDD4-211ENST00000514893 FKBPLQ9UIM3 349 aa10.35□□□□□ -0.75
NEDD4-211ENST00000514893 SPINT1O43278 529 aa10.34□□□□□ -0.75
NEDD4-211ENST00000514893 SLC10A4Q96EP9 437 aa10.34□□□□□ -0.75
NEDD4-211ENST00000514893 KCTD15Q96SI1 283 aaPredicted RBP10.34□□□□□ -0.75
NEDD4-211ENST00000514893 NANOS1Q8WY41 292 aaKnown RBP10.33□□□□□ -0.76
NEDD4-211ENST00000514893 ZC3H4Q9UPT8 1303 aaKnown RBP10.33□□□□□ -0.76
NEDD4-211ENST00000514893 PTK2Q05397 1052 aa10.32□□□□□ -0.76
NEDD4-211ENST00000514893 CBLBQ13191 982 aa10.32□□□□□ -0.76
NEDD4-211ENST00000514893 GPR161Q8N6U8 529 aaKnown RBP10.32□□□□□ -0.76
NEDD4-211ENST00000514893 CNTNAP3BQ96NU0 1288 aa10.32□□□□□ -0.76
NEDD4-211ENST00000514893 CNTNAP3Q9BZ76 1288 aa10.32□□□□□ -0.76
NEDD4-211ENST00000514893 SKIV2LQ15477 1246 aaKnown RBP10.31□□□□□ -0.76
NEDD4-211ENST00000514893 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
NEDD4-211ENST00000514893 ATP1B4Q9UN42 357 aaPredicted RBP10.3□□□□□ -0.76
NEDD4-211ENST00000514893 GPSM3Q9Y4H4 160 aa10.3□□□□□ -0.76
NEDD4-211ENST00000514893 PNMA1Q8ND90 353 aa10.29□□□□□ -0.76
NEDD4-211ENST00000514893 LRRN4Q8WUT4 740 aa10.29□□□□□ -0.76
NEDD4-211ENST00000514893 COL25A1Q9BXS0 654 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-211ENST00000514893 RNF225M0QZC1 329 aaPredicted RBP10.28□□□□□ -0.76
NEDD4-211ENST00000514893 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
NEDD4-211ENST00000514893 ADAMTS8Q9UP79 889 aa10.28□□□□□ -0.76
NEDD4-211ENST00000514893 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
NEDD4-211ENST00000514893 KRT76Q01546 638 aa10.27□□□□□ -0.77
NEDD4-211ENST00000514893 NR6A1Q15406 480 aa10.26□□□□□ -0.77
NEDD4-211ENST00000514893 SV2AQ7L0J3 742 aa10.26□□□□□ -0.77
NEDD4-211ENST00000514893 TRIM52Q96A61 297 aa10.26□□□□□ -0.77
NEDD4-211ENST00000514893 GDF11O95390 407 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 ITGA6P23229 1130 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 RELBQ01201 579 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 RASSF7Q02833 373 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
NEDD4-211ENST00000514893 VWA5B2Q8N398 1253 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 AGBL1Q96MI9 1066 aa10.25□□□□□ -0.77
NEDD4-211ENST00000514893 CTSOP43234 321 aaPredicted RBP10.24□□□□□ -0.77
NEDD4-211ENST00000514893 SH3D19Q5HYK7 790 aa10.24□□□□□ -0.77
NEDD4-211ENST00000514893 PPP2R2DQ66LE6 453 aa10.24□□□□□ -0.77
NEDD4-211ENST00000514893 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
NEDD4-211ENST00000514893 POLMQ9NP87 494 aaPredicted RBP10.24□□□□□ -0.77
NEDD4-211ENST00000514893 GSK3AP49840 483 aa10.23□□□□□ -0.77
NEDD4-211ENST00000514893 ADAM32Q8TC27 787 aa10.23□□□□□ -0.77
NEDD4-211ENST00000514893 AP1G2O75843 785 aa10.22□□□□□ -0.77
NEDD4-211ENST00000514893 SVOPQ8N4V2 548 aa10.22□□□□□ -0.77
NEDD4-211ENST00000514893 PROCA1Q8NCQ7 364 aaPredicted RBP10.22□□□□□ -0.77
NEDD4-211ENST00000514893 DDRGK1Q96HY6 314 aa10.22□□□□□ -0.77
NEDD4-211ENST00000514893 CDC14CA4D256 554 aa10.21□□□□□ -0.77
NEDD4-211ENST00000514893 SLURP2P0DP57 97 aa10.21□□□□□ -0.77
NEDD4-211ENST00000514893 ZNF385CQ66K41 422 aaPredicted RBP10.21□□□□□ -0.77
NEDD4-211ENST00000514893 DZIP3Q86Y13 1208 aaKnown RBP10.21□□□□□ -0.77
NEDD4-211ENST00000514893 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.77
NEDD4-211ENST00000514893 SUZ12Q15022 739 aaKnown RBP10.2□□□□□ -0.78
NEDD4-211ENST00000514893 RNFT1Q5M7Z0 435 aa10.2□□□□□ -0.78
NEDD4-211ENST00000514893 ZNF395Q9H8N7 513 aaPredicted RBP10.2□□□□□ -0.78
NEDD4-211ENST00000514893 OCSTAMPQ9BR26 566 aa10.19□□□□□ -0.78
NEDD4-211ENST00000514893 LOC100996750A0A140TA64 210 aa10.18□□□□□ -0.78
NEDD4-211ENST00000514893 MARSP56192 900 aaKnown RBP10.18□□□□□ -0.78
NEDD4-211ENST00000514893 RNF217Q8TC41 542 aa10.18□□□□□ -0.78
NEDD4-211ENST00000514893 KRTAP4-6Q9BYQ5 205 aa10.18□□□□□ -0.78
NEDD4-211ENST00000514893 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
NEDD4-211ENST00000514893 ADH1AP07327 375 aa10.17□□□□□ -0.78
NEDD4-211ENST00000514893 PTGIRP43119 386 aa10.17□□□□□ -0.78
NEDD4-211ENST00000514893 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
NEDD4-211ENST00000514893 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
NEDD4-211ENST00000514893 RAB15P59190 212 aa10.16□□□□□ -0.78
NEDD4-211ENST00000514893 KDM4CQ9H3R0 1056 aa10.16□□□□□ -0.78
NEDD4-211ENST00000514893 ARHGEF15O94989 841 aa10.15□□□□□ -0.78
NEDD4-211ENST00000514893 ADD1P35611 737 aaKnown RBP10.15□□□□□ -0.78
NEDD4-211ENST00000514893 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.78
NEDD4-211ENST00000514893 LYSMD3Q7Z3D4 306 aa10.15□□□□□ -0.78
NEDD4-211ENST00000514893 LILRA1O75019 489 aa10.14□□□□□ -0.79
NEDD4-211ENST00000514893 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
NEDD4-211ENST00000514893 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
NEDD4-211ENST00000514893 SCARF2Q96GP6 870 aaPredicted RBP10.14□□□□□ -0.79
NEDD4-211ENST00000514893 FAM117AQ9C073 453 aa10.14□□□□□ -0.79
NEDD4-211ENST00000514893 SENP3-EIF4A1A0A087X0R7 540 aa10.13□□□□□ -0.79
NEDD4-211ENST00000514893 ESPNB1AK53 854 aa10.13□□□□□ -0.79
NEDD4-211ENST00000514893 KANK3Q6NY19 840 aa10.13□□□□□ -0.79
NEDD4-211ENST00000514893 IRS1P35568 1242 aa10.12□□□□□ -0.79
NEDD4-211ENST00000514893 SRSF11Q05519 484 aaKnown RBP10.12□□□□□ -0.79
NEDD4-211ENST00000514893 EPS8L1Q8TE68 723 aa10.12□□□□□ -0.79
NEDD4-211ENST00000514893 GMCL1Q96IK5 515 aa10.12□□□□□ -0.79
NEDD4-211ENST00000514893 ENAMQ9NRM1 1142 aa10.12□□□□□ -0.79
NEDD4-211ENST00000514893 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 IGHA1P01876 353 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 RNF144AP50876 292 aaPredicted RBP10.11□□□□□ -0.79
NEDD4-211ENST00000514893 MAP3K10Q02779 954 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 CCDC125Q86Z20 511 aa10.11□□□□□ -0.79
NEDD4-211ENST00000514893 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms