RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 A0A0G2JS52 829 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 MYT1Q01538 1121 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
HERC4-214ENST00000513996 A0A1W2PP64 1363 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 AATKQ6ZMQ8 1374 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 USP31Q70CQ4 1352 aa12.27□□□□□ -0.45
HERC4-214ENST00000513996 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
HERC4-214ENST00000513996 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
HERC4-214ENST00000513996 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 TMF1P82094 1093 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 CCDC125Q86Z20 511 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 KCNH5Q8NCM2 988 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 EP400Q96L91 3159 aa12.25□□□□□ -0.45
HERC4-214ENST00000513996 COL5A2P05997 1499 aaPredicted RBP12.24□□□□□ -0.45
HERC4-214ENST00000513996 EDC4Q6P2E9 1401 aaKnown RBP12.24□□□□□ -0.45
HERC4-214ENST00000513996 COL18A1P39060 1754 aa12.23□□□□□ -0.45
HERC4-214ENST00000513996 MON2Q7Z3U7 1717 aa12.23□□□□□ -0.45
HERC4-214ENST00000513996 DEFB132Q7Z7B7 95 aa12.23□□□□□ -0.45
HERC4-214ENST00000513996 SPINK5Q9NQ38 1064 aaPredicted RBP12.23□□□□□ -0.45
HERC4-214ENST00000513996 NFAT5O94916 1531 aa12.22□□□□□ -0.45
HERC4-214ENST00000513996 CAPN15O75808 1086 aa12.22□□□□□ -0.45
HERC4-214ENST00000513996 FBLN1P23142 703 aa12.22□□□□□ -0.45
HERC4-214ENST00000513996 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
HERC4-214ENST00000513996 BLMP54132 1417 aaPredicted RBP12.21□□□□□ -0.45
HERC4-214ENST00000513996 NINLQ9Y2I6 1382 aa12.21□□□□□ -0.45
HERC4-214ENST00000513996 TOM1L2Q6ZVM7 507 aa12.21□□□□□ -0.45
HERC4-214ENST00000513996 THRAP3Q9Y2W1 955 aaKnown RBP12.21□□□□□ -0.45
HERC4-214ENST00000513996 CRB1P82279 1406 aa12.2□□□□□ -0.46
HERC4-214ENST00000513996 ANKRD36BQ8N2N9 1353 aa12.2□□□□□ -0.46
HERC4-214ENST00000513996 WDR17Q8IZU2 1322 aa12.2□□□□□ -0.46
HERC4-214ENST00000513996 HSPA5P11021 654 aaKnown RBP12.2□□□□□ -0.46
HERC4-214ENST00000513996 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
HERC4-214ENST00000513996 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
HERC4-214ENST00000513996 FYB1O15117 783 aa12.19□□□□□ -0.46
HERC4-214ENST00000513996 OVOS2A0A0J9YW53 1432 aa12.19□□□□□ -0.46
HERC4-214ENST00000513996 OVOS2Q6IE36 1432 aa12.19□□□□□ -0.46
HERC4-214ENST00000513996 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
HERC4-214ENST00000513996 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
HERC4-214ENST00000513996 CARD10Q9BWT7 1032 aa12.18□□□□□ -0.46
HERC4-214ENST00000513996 RGPD5Q99666 1765 aa12.18□□□□□ -0.46
HERC4-214ENST00000513996 TRIM37O94972 964 aa12.17□□□□□ -0.46
HERC4-214ENST00000513996 CSB-PGBD3P0DP91 1061 aa12.17□□□□□ -0.46
HERC4-214ENST00000513996 EIF4G2P78344 907 aaKnown RBP eCLIP12.17□□□□□ -0.46
HERC4-214ENST00000513996 SF3B2Q13435 895 aaKnown RBP12.17□□□□□ -0.46
HERC4-214ENST00000513996 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
HERC4-214ENST00000513996 COG3Q96JB2 828 aa12.17□□□□□ -0.46
HERC4-214ENST00000513996 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
HERC4-214ENST00000513996 USP54Q70EL1 1684 aa12.16□□□□□ -0.46
HERC4-214ENST00000513996 C11orf95C9JLR9 678 aaPredicted RBP12.16□□□□□ -0.46
HERC4-214ENST00000513996 EN1Q05925 392 aaPredicted RBP12.16□□□□□ -0.46
HERC4-214ENST00000513996 IP6K1Q92551 441 aa12.16□□□□□ -0.46
HERC4-214ENST00000513996 ZNF219Q9P2Y4 722 aaPredicted RBP12.16□□□□□ -0.46
HERC4-214ENST00000513996 ERBB3P21860 1342 aa12.15□□□□□ -0.46
HERC4-214ENST00000513996 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
HERC4-214ENST00000513996 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
HERC4-214ENST00000513996 BAG6P46379 1132 aa12.14□□□□□ -0.47
HERC4-214ENST00000513996 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
HERC4-214ENST00000513996 DDB1Q16531 1140 aa12.14□□□□□ -0.47
HERC4-214ENST00000513996 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
HERC4-214ENST00000513996 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
HERC4-214ENST00000513996 NLRP2Q9NX02 1062 aa12.14□□□□□ -0.47
HERC4-214ENST00000513996 DISP2A7MBM2 1401 aa12.13□□□□□ -0.47
HERC4-214ENST00000513996 HOXC9P31274 260 aa12.13□□□□□ -0.47
HERC4-214ENST00000513996 DSG3P32926 999 aa12.13□□□□□ -0.47
HERC4-214ENST00000513996 PTF1AQ7RTS3 328 aa12.13□□□□□ -0.47
HERC4-214ENST00000513996 LTV1Q96GA3 475 aaPredicted RBP12.13□□□□□ -0.47
HERC4-214ENST00000513996 EZH2Q15910 746 aaKnown RBP12.12□□□□□ -0.47
HERC4-214ENST00000513996 CAMKK2Q96RR4 588 aa12.12□□□□□ -0.47
HERC4-214ENST00000513996 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
HERC4-214ENST00000513996 ABCC6O95255 1503 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 CCDC7Q96M83 1385 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 EXOC5O00471 708 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 APBA3O96018 575 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 AMPHP49418 695 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
HERC4-214ENST00000513996 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
HERC4-214ENST00000513996 LTN1O94822 1766 aa12.1□□□□□ -0.47
HERC4-214ENST00000513996 MYOM1P52179 1685 aa12.1□□□□□ -0.47
HERC4-214ENST00000513996 PANK3Q9H999 370 aa12.1□□□□□ -0.47
HERC4-214ENST00000513996 IL2RBP14784 551 aa12.09□□□□□ -0.47
HERC4-214ENST00000513996 HSP90AB2PQ58FF8 381 aa12.09□□□□□ -0.47
HERC4-214ENST00000513996 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
HERC4-214ENST00000513996 NBPF6Q5VWK0 638 aa12.08□□□□□ -0.48
HERC4-214ENST00000513996 NBPF4Q96M43 638 aa12.08□□□□□ -0.48
HERC4-214ENST00000513996 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
HERC4-214ENST00000513996 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
HERC4-214ENST00000513996 OVOS2A0A0G2JMS6 1433 aa12.07□□□□□ -0.48
HERC4-214ENST00000513996 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
HERC4-214ENST00000513996 RGPD1P0DJD0 1748 aa12.07□□□□□ -0.48
HERC4-214ENST00000513996 TNS1Q9HBL0 1735 aaKnown RBP12.07□□□□□ -0.48
HERC4-214ENST00000513996 CGNL1Q0VF96 1302 aa12.07□□□□□ -0.48
HERC4-214ENST00000513996 KCNQ2O43526 872 aa12.06□□□□□ -0.48
HERC4-214ENST00000513996 BCL11BQ9C0K0 894 aaPredicted RBP12.06□□□□□ -0.48
HERC4-214ENST00000513996 BCL9O00512 1426 aa12.05□□□□□ -0.48
HERC4-214ENST00000513996 WNK3Q9BYP7 1800 aa12.05□□□□□ -0.48
HERC4-214ENST00000513996 PROM2Q8N271 834 aa12.05□□□□□ -0.48
HERC4-214ENST00000513996 USHBP1Q8N6Y0 703 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 476.7 ms