RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 RBL2Q08999 1139 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 FAM69CQ0P6D2 419 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 BMS1Q14692 1282 aaKnown RBP4.42□□□□□ -1.7
PVT1-202ENST00000512617 CRTC2Q53ET0 693 aaPredicted RBP4.42□□□□□ -1.7
PVT1-202ENST00000512617 PPP1R18Q6NYC8 613 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 EVI5LQ96CN4 794 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 GMLQ99445 158 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 ZBTB3Q9H5J0 574 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 PCDH12Q9NPG4 1184 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 ANO2Q9NQ90 1003 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 IFT57Q9NWB7 429 aa4.42□□□□□ -1.7
PVT1-202ENST00000512617 MRPL42Q9Y6G3 142 aaKnown RBP4.42□□□□□ -1.7
PVT1-202ENST00000512617 PPP1R3GB7ZBB8 358 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 EVI5O60447 810 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 ICMTO60725 284 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 DNAJC6O75061 913 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 SKIP12755 728 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 RASA1P20936 1047 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 APLP1P51693 650 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 FANCCQ00597 558 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 ARID5AQ03989 594 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 CTDSPL2Q05D32 466 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 BIRC2Q13490 618 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 LDLRAD1Q5T700 205 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 TSHZ1Q6ZSZ6 1077 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 PLEKHM2Q8IWE5 1019 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 RGL4Q8IZJ4 473 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 FAM9BQ8IZU0 186 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 NFATC2IPQ8NCF5 419 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 HELBQ8NG08 1087 aaPredicted RBP4.41□□□□□ -1.7
PVT1-202ENST00000512617 C1orf216Q8TAB5 229 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 MRFAP1L1Q96HT8 127 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 ACBD3Q9H3P7 528 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 METTL5Q9NRN9 209 aaKnown RBP4.41□□□□□ -1.7
PVT1-202ENST00000512617 ADGRG1Q9Y653 693 aa4.41□□□□□ -1.7
PVT1-202ENST00000512617 USP17L5A8MUK1 530 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 PIK3CDO00329 1044 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 C21orf2O43822 256 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 STK10O94804 968 aaKnown RBP4.4□□□□□ -1.71
PVT1-202ENST00000512617 CD46P15529 392 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 TNNI2P48788 182 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 TBX4P57082 545 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 RHBDL3P58872 404 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 PTK7Q13308 1070 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 NFE2L2Q16236 605 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 SWI5Q1ZZU3 235 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 C4orf46Q504U0 113 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 ANKMY2Q8IV38 441 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 FMNL3Q8IVF7 1028 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 RBM33Q96EV2 1170 aaKnown RBP4.4□□□□□ -1.71
PVT1-202ENST00000512617 KIF12Q96FN5 646 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 SPC25Q9HBM1 224 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 DDX56Q9NY93 547 aaKnown RBP4.4□□□□□ -1.71
PVT1-202ENST00000512617 MKRN1Q9UHC7 482 aaKnown RBP4.4□□□□□ -1.71
PVT1-202ENST00000512617 PNMA2Q9UL42 364 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 PRR12Q9ULL5 1215 aa4.4□□□□□ -1.71
PVT1-202ENST00000512617 C2orf72A6NCS6 295 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 PPP1R12AO14974 1030 aaPredicted RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 PRC1O43663 620 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 PAK3O75914 559 aaPredicted RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 P4HBP07237 508 aaKnown RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 ZNF76P36508 570 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 FOXD4Q12950 439 aaPredicted RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 PADI6Q6TGC4 694 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 PPARGC1BQ86YN6 1023 aaKnown RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 DEPDC4Q8N2C3 294 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 PNISRQ8TF01 805 aaKnown RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 LRRN4Q8WUT4 740 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 TSC1Q92574 1164 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 RPS6KC1Q96S38 1066 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 EPAS1Q99814 870 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 MAF1Q9H063 256 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 INPP5FQ9Y2H2 1132 aa4.39□□□□□ -1.71
PVT1-202ENST00000512617 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 EIF4G1Q04637 1599 aaKnown RBP4.39□□□□□ -1.71
PVT1-202ENST00000512617 ATP5J2-PTCD1G3V325 749 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 PITPNM1O00562 1244 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 WDHD1O75717 1129 aaPredicted RBP4.38□□□□□ -1.71
PVT1-202ENST00000512617 XRCC5P13010 732 aaKnown RBP4.38□□□□□ -1.71
PVT1-202ENST00000512617 MCCP23508 829 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 FXR2P51116 673 aaKnown RBP eCLIP4.38□□□□□ -1.71
PVT1-202ENST00000512617 PDE3BQ13370 1112 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 KRBA2Q6ZNG9 492 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 RNF135Q8IUD6 432 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 SULF1Q8IWU6 871 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 MICALL2Q8IY33 904 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 RPUSD2Q8IZ73 545 aaKnown RBP4.38□□□□□ -1.71
PVT1-202ENST00000512617 CNPY4Q8N129 248 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 PRPF38AQ8NAV1 312 aaKnown RBP4.38□□□□□ -1.71
PVT1-202ENST00000512617 EPS8L1Q8TE68 723 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 JDP2Q8WYK2 163 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 FAM161BQ96MY7 647 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 TMEM106CQ9BVX2 250 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 VTI1BQ9UEU0 232 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 CC2D2AQ9P2K1 1620 aa4.38□□□□□ -1.71
PVT1-202ENST00000512617 ENPP3O14638 875 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 SORBS3O60504 671 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 PRMT3O60678 531 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 PHF14O94880 888 aa4.37□□□□□ -1.71
PVT1-202ENST00000512617 WDR78Q5VTH9 848 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms