RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 GCP02774 474 aa13.36□□□□□ -0.27
PDGFRA-210ENST00000512522 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
PDGFRA-210ENST00000512522 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-210ENST00000512522 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-210ENST00000512522 IL13P35225 146 aa13.35□□□□□ -0.27
PDGFRA-210ENST00000512522 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-210ENST00000512522 ABCB7O75027 752 aa13.34□□□□□ -0.27
PDGFRA-210ENST00000512522 POLA2Q14181 598 aa13.34□□□□□ -0.27
PDGFRA-210ENST00000512522 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDGFRA-210ENST00000512522 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
PDGFRA-210ENST00000512522 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
PDGFRA-210ENST00000512522 FLT4P35916 1363 aa13.33□□□□□ -0.27
PDGFRA-210ENST00000512522 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
PDGFRA-210ENST00000512522 SOX12O15370 315 aa13.33□□□□□ -0.28
PDGFRA-210ENST00000512522 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
PDGFRA-210ENST00000512522 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
PDGFRA-210ENST00000512522 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 HOXC9P31274 260 aa13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 IP6K1Q92551 441 aa13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 LTN1O94822 1766 aa13.32□□□□□ -0.28
PDGFRA-210ENST00000512522 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
PDGFRA-210ENST00000512522 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
PDGFRA-210ENST00000512522 CPDO75976 1380 aa13.31□□□□□ -0.28
PDGFRA-210ENST00000512522 AMPHP49418 695 aa13.3□□□□□ -0.28
PDGFRA-210ENST00000512522 HNRNPUQ00839 825 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDGFRA-210ENST00000512522 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
PDGFRA-210ENST00000512522 COL22A1Q8NFW1 1626 aaPredicted RBP13.3□□□□□ -0.28
PDGFRA-210ENST00000512522 RGPD1P0DJD0 1748 aa13.3□□□□□ -0.28
PDGFRA-210ENST00000512522 U2AF1L5P0DN76 240 aaPredicted RBP13.29□□□□□ -0.28
PDGFRA-210ENST00000512522 U2AF1Q01081 240 aaKnown RBP eCLIP13.29□□□□□ -0.28
PDGFRA-210ENST00000512522 COL18A1P39060 1754 aa13.29□□□□□ -0.28
PDGFRA-210ENST00000512522 PHLPP1O60346 1717 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 ABCA3Q99758 1704 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 FCHSD2O94868 740 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 DSG3P32926 999 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 PLEKHF1Q96S99 279 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 ABCC6O95255 1503 aa13.28□□□□□ -0.28
PDGFRA-210ENST00000512522 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
PDGFRA-210ENST00000512522 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
PDGFRA-210ENST00000512522 RSPH6AQ9H0K4 717 aa13.27□□□□□ -0.29
PDGFRA-210ENST00000512522 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
PDGFRA-210ENST00000512522 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
PDGFRA-210ENST00000512522 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
PDGFRA-210ENST00000512522 AXIN2Q9Y2T1 843 aa13.26□□□□□ -0.29
PDGFRA-210ENST00000512522 KDRP35968 1356 aa13.25□□□□□ -0.29
PDGFRA-210ENST00000512522 KIAA0232Q92628 1395 aa13.25□□□□□ -0.29
PDGFRA-210ENST00000512522 EYA1Q99502 592 aa13.25□□□□□ -0.29
PDGFRA-210ENST00000512522 APAF1O14727 1248 aa13.24□□□□□ -0.29
PDGFRA-210ENST00000512522 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
PDGFRA-210ENST00000512522 NCAPD2Q15021 1401 aa13.23□□□□□ -0.29
PDGFRA-210ENST00000512522 ZNF521Q96K83 1311 aa13.23□□□□□ -0.29
PDGFRA-210ENST00000512522 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
PDGFRA-210ENST00000512522 PNNQ9H307 717 aaKnown RBP13.23□□□□□ -0.29
PDGFRA-210ENST00000512522 RGPD5Q99666 1765 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 LMO7Q8WWI1 1683 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 HMOX1P09601 288 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 PRKAR2BP31323 418 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 SULT6B1Q6IMI4 303 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
PDGFRA-210ENST00000512522 ERBB3P21860 1342 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 CHRNA2Q15822 529 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 NBPF6Q5VWK0 638 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 NBPF4Q96M43 638 aa13.21□□□□□ -0.29
PDGFRA-210ENST00000512522 CAMTA1Q9Y6Y1 1673 aa13.21□□□□□ -0.3
PDGFRA-210ENST00000512522 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 ZBTB7CA1YPR0 619 aa13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 CENPBP07199 599 aaPredicted RBP13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 LTV1Q96GA3 475 aaPredicted RBP13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
PDGFRA-210ENST00000512522 TMPOP42166 694 aaKnown RBP13.19□□□□□ -0.3
PDGFRA-210ENST00000512522 MKRN4PQ13434 485 aaPredicted RBP13.19□□□□□ -0.3
PDGFRA-210ENST00000512522 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
PDGFRA-210ENST00000512522 JCADQ9P266 1359 aa13.19□□□□□ -0.3
PDGFRA-210ENST00000512522 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
PDGFRA-210ENST00000512522 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
PDGFRA-210ENST00000512522 PDE3BQ13370 1112 aa13.17□□□□□ -0.3
PDGFRA-210ENST00000512522 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
PDGFRA-210ENST00000512522 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 FAM208AQ9UK61 1670 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 HSPA1LP34931 641 aa13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 NFE2L2Q16236 605 aa13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 WWC1Q8IX03 1113 aa13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 COL14A1Q05707 1796 aaKnown RBP13.16□□□□□ -0.3
PDGFRA-210ENST00000512522 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
PDGFRA-210ENST00000512522 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
PDGFRA-210ENST00000512522 RIPK4P57078 832 aa13.14□□□□□ -0.31
PDGFRA-210ENST00000512522 TRMT2AQ8IZ69 625 aaKnown RBP13.14□□□□□ -0.31
PDGFRA-210ENST00000512522 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
PDGFRA-210ENST00000512522 SPATA31A6Q5VVP1 1343 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms