RNA–Protein interactions for RNA: ENST00000512189.1

LETM1-206, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 3

Gene LETM1, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-206ENST00000512189 HSP90AB2PQ58FF8 381 aa20.45■□□□□ 0.86
LETM1-206ENST00000512189 CABLES1Q8TDN4 633 aa20.44■□□□□ 0.86
LETM1-206ENST00000512189 IP6K1Q92551 441 aa20.44■□□□□ 0.86
LETM1-206ENST00000512189 HNRNPUQ00839 825 aaKnown RBP eCLIP20.43■□□□□ 0.86
LETM1-206ENST00000512189 COL18A1P39060 1754 aa20.43■□□□□ 0.86
LETM1-206ENST00000512189 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
LETM1-206ENST00000512189 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
LETM1-206ENST00000512189 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
LETM1-206ENST00000512189 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
LETM1-206ENST00000512189 LMO7Q8WWI1 1683 aa20.41■□□□□ 0.86
LETM1-206ENST00000512189 PLEKHG5O94827 1062 aa20.4■□□□□ 0.86
LETM1-206ENST00000512189 CAMTA1Q9Y6Y1 1673 aa20.4■□□□□ 0.86
LETM1-206ENST00000512189 ZBED9Q6R2W3 1325 aa20.39■□□□□ 0.85
LETM1-206ENST00000512189 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
LETM1-206ENST00000512189 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
LETM1-206ENST00000512189 NCAPD2Q15021 1401 aa20.38■□□□□ 0.85
LETM1-206ENST00000512189 KDRP35968 1356 aa20.37■□□□□ 0.85
LETM1-206ENST00000512189 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
LETM1-206ENST00000512189 RUNDC1Q96C34 613 aa20.37■□□□□ 0.85
LETM1-206ENST00000512189 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
LETM1-206ENST00000512189 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
LETM1-206ENST00000512189 FCHSD2O94868 740 aa20.36■□□□□ 0.85
LETM1-206ENST00000512189 PLEKHF1Q96S99 279 aa20.36■□□□□ 0.85
LETM1-206ENST00000512189 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
LETM1-206ENST00000512189 ERBB3P21860 1342 aa20.34■□□□□ 0.85
LETM1-206ENST00000512189 HAP1P54257 671 aaPredicted RBP20.34■□□□□ 0.85
LETM1-206ENST00000512189 EYA1Q99502 592 aa20.34■□□□□ 0.85
LETM1-206ENST00000512189 AXIN2Q9Y2T1 843 aa20.34■□□□□ 0.85
LETM1-206ENST00000512189 JCADQ9P266 1359 aa20.34■□□□□ 0.85
LETM1-206ENST00000512189 PNNQ9H307 717 aaKnown RBP20.33■□□□□ 0.85
LETM1-206ENST00000512189 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.85
LETM1-206ENST00000512189 COL14A1Q05707 1796 aaKnown RBP20.33■□□□□ 0.84
LETM1-206ENST00000512189 HMOX1P09601 288 aa20.32■□□□□ 0.84
LETM1-206ENST00000512189 CHRNA2Q15822 529 aa20.32■□□□□ 0.84
LETM1-206ENST00000512189 ANKRD24Q8TF21 1146 aa20.32■□□□□ 0.84
LETM1-206ENST00000512189 COL5A2P05997 1499 aaPredicted RBP20.31■□□□□ 0.84
LETM1-206ENST00000512189 APAF1O14727 1248 aa20.31■□□□□ 0.84
LETM1-206ENST00000512189 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
LETM1-206ENST00000512189 AEBP1Q8IUX7 1158 aa20.31■□□□□ 0.84
LETM1-206ENST00000512189 NGEFQ8N5V2 710 aa20.31■□□□□ 0.84
LETM1-206ENST00000512189 RGPD5Q99666 1765 aa20.31■□□□□ 0.84
LETM1-206ENST00000512189 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
LETM1-206ENST00000512189 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
LETM1-206ENST00000512189 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
LETM1-206ENST00000512189 MAPK8IP3Q9UPT6 1336 aa20.29■□□□□ 0.84
LETM1-206ENST00000512189 CENPBP07199 599 aaPredicted RBP20.28■□□□□ 0.84
LETM1-206ENST00000512189 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
LETM1-206ENST00000512189 ZNF521Q96K83 1311 aa20.27■□□□□ 0.84
LETM1-206ENST00000512189 NBPF6Q5VWK0 638 aa20.27■□□□□ 0.84
LETM1-206ENST00000512189 NBPF4Q96M43 638 aa20.27■□□□□ 0.84
LETM1-206ENST00000512189 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
LETM1-206ENST00000512189 SENP3-EIF4A1A0A087X0R7 540 aa20.26■□□□□ 0.83
LETM1-206ENST00000512189 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
LETM1-206ENST00000512189 PLCH1Q4KWH8 1693 aa20.26■□□□□ 0.83
LETM1-206ENST00000512189 FAM83GA6ND36 823 aa20.25■□□□□ 0.83
LETM1-206ENST00000512189 HSPA1LP34931 641 aa20.25■□□□□ 0.83
LETM1-206ENST00000512189 SPATA31A6Q5VVP1 1343 aa20.25■□□□□ 0.83
LETM1-206ENST00000512189 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
LETM1-206ENST00000512189 PLEKHG2Q9H7P9 1386 aa20.24■□□□□ 0.83
LETM1-206ENST00000512189 NEFMP07197 916 aa20.24■□□□□ 0.83
LETM1-206ENST00000512189 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
LETM1-206ENST00000512189 PHACTR3Q96KR7 559 aa20.24■□□□□ 0.83
LETM1-206ENST00000512189 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
LETM1-206ENST00000512189 NRAPQ86VF7 1730 aa20.23■□□□□ 0.83
LETM1-206ENST00000512189 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
LETM1-206ENST00000512189 LRP6O75581 1613 aa20.23■□□□□ 0.83
LETM1-206ENST00000512189 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
LETM1-206ENST00000512189 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
LETM1-206ENST00000512189 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
LETM1-206ENST00000512189 SLIT2O94813 1529 aa20.21■□□□□ 0.83
LETM1-206ENST00000512189 NWD2Q9ULI1 1742 aa20.2■□□□□ 0.82
LETM1-206ENST00000512189 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
LETM1-206ENST00000512189 PDE3BQ13370 1112 aa20.2■□□□□ 0.82
LETM1-206ENST00000512189 NLRP2Q9NX02 1062 aa20.19■□□□□ 0.82
LETM1-206ENST00000512189 CRB1P82279 1406 aa20.19■□□□□ 0.82
LETM1-206ENST00000512189 MEGF6O75095 1541 aa20.18■□□□□ 0.82
LETM1-206ENST00000512189 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
LETM1-206ENST00000512189 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
LETM1-206ENST00000512189 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
LETM1-206ENST00000512189 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
LETM1-206ENST00000512189 BTG4Q9NY30 223 aa20.18■□□□□ 0.82
LETM1-206ENST00000512189 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
LETM1-206ENST00000512189 TRIM35Q9UPQ4 493 aa20.17■□□□□ 0.82
LETM1-206ENST00000512189 RIPK4P57078 832 aa20.16■□□□□ 0.82
LETM1-206ENST00000512189 NEUROD2Q15784 382 aa20.16■□□□□ 0.82
LETM1-206ENST00000512189 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
LETM1-206ENST00000512189 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
LETM1-206ENST00000512189 CARD10Q9BWT7 1032 aa20.15■□□□□ 0.82
LETM1-206ENST00000512189 PKD1L3Q7Z443 1732 aa20.15■□□□□ 0.82
LETM1-206ENST00000512189 PARP4Q9UKK3 1724 aaKnown RBP20.15■□□□□ 0.82
LETM1-206ENST00000512189 LRRC37A3O60309 1634 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 OVOS2A0A0G2JMS6 1433 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 LMOD3Q0VAK6 560 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 LARP1Q6PKG0 1096 aaKnown RBP20.14■□□□□ 0.81
LETM1-206ENST00000512189 TOM1L2Q6ZVM7 507 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 STRN4Q9NRL3 753 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
LETM1-206ENST00000512189 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
LETM1-206ENST00000512189 EVA1CP58658 441 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms