RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
PDLIM5-215ENST00000511586 RGS12O14924 1447 aa9.82□□□□□ -0.84
PDLIM5-215ENST00000511586 SPATA31A1Q5TZJ5 1347 aa9.82□□□□□ -0.84
PDLIM5-215ENST00000511586 LMO7Q8WWI1 1683 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 COL5A2P05997 1499 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 CSB-PGBD3P0DP91 1061 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 AMPHP49418 695 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 FAM98CQ17RN3 349 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 TOM1L2Q6ZVM7 507 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 SEPT12Q8IYM1 358 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 IP6K1Q92551 441 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 USP35Q9P2H5 1018 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 NRAPQ86VF7 1730 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 MAP3K19Q56UN5 1328 aa9.81□□□□□ -0.84
PDLIM5-215ENST00000511586 GLI3P10071 1580 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 A0A0G2JS52 829 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 FBLN1P23142 703 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 MYT1Q01538 1121 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 TCP11L2Q8N4U5 519 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 THRAP3Q9Y2W1 955 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 ABCC6O95255 1503 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 WDR17Q8IZU2 1322 aa9.8□□□□□ -0.84
PDLIM5-215ENST00000511586 COL18A1P39060 1754 aa9.79□□□□□ -0.84
PDLIM5-215ENST00000511586 RRS1Q15050 365 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-215ENST00000511586 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
PDLIM5-215ENST00000511586 ANKRD24Q8TF21 1146 aa9.79□□□□□ -0.84
PDLIM5-215ENST00000511586 CRB1P82279 1406 aa9.79□□□□□ -0.84
PDLIM5-215ENST00000511586 NSD2O96028 1365 aa9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 PER1O15534 1290 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 HOXC9P31274 260 aa9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 CARD10Q9BWT7 1032 aa9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 ERBB3P21860 1342 aa9.78□□□□□ -0.84
PDLIM5-215ENST00000511586 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.84
PDLIM5-215ENST00000511586 TNNT2P45379 298 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-215ENST00000511586 AMER1Q5JTC6 1135 aaPredicted RBP9.77□□□□□ -0.85
PDLIM5-215ENST00000511586 KRT27Q7Z3Y8 459 aa9.77□□□□□ -0.85
PDLIM5-215ENST00000511586 MORC1Q86VD1 984 aa9.77□□□□□ -0.85
PDLIM5-215ENST00000511586 NLRP2Q9NX02 1062 aa9.77□□□□□ -0.85
PDLIM5-215ENST00000511586 RTL1A6NKG5 1358 aa9.76□□□□□ -0.85
PDLIM5-215ENST00000511586 KIF24Q5T7B8 1368 aa9.76□□□□□ -0.85
PDLIM5-215ENST00000511586 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-215ENST00000511586 LTV1Q96GA3 475 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-215ENST00000511586 LTN1O94822 1766 aa9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 CDCA7Q9BWT1 371 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 POLKQ9UBT6 870 aa9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 INSRP06213 1382 aa9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 FLT4P35916 1363 aa9.75□□□□□ -0.85
PDLIM5-215ENST00000511586 RGPD5Q99666 1765 aa9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 PDE3BQ13370 1112 aa9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 HSP90AB2PQ58FF8 381 aa9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 CC2D1BQ5T0F9 858 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 UPF1Q92900 1129 aaKnown RBP eCLIP9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 NPC1L1Q9UHC9 1359 aa9.74□□□□□ -0.85
PDLIM5-215ENST00000511586 SMG6Q86US8 1419 aaKnown RBP9.73□□□□□ -0.85
PDLIM5-215ENST00000511586 THSD7AQ9UPZ6 1657 aa9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 EXOC5O00471 708 aa9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 IL2RBP14784 551 aa9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 DDB1Q16531 1140 aa9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 CCDC125Q86Z20 511 aa9.72□□□□□ -0.85
PDLIM5-215ENST00000511586 ANKRD26Q9UPS8 1709 aa9.71□□□□□ -0.85
PDLIM5-215ENST00000511586 FAM182BQ5T319 152 aa9.71□□□□□ -0.86
PDLIM5-215ENST00000511586 NBPF6Q5VWK0 638 aa9.71□□□□□ -0.86
PDLIM5-215ENST00000511586 FAM196AQ6ZSG2 479 aa9.71□□□□□ -0.86
PDLIM5-215ENST00000511586 NBPF4Q96M43 638 aa9.71□□□□□ -0.86
PDLIM5-215ENST00000511586 DISP2A7MBM2 1401 aa9.71□□□□□ -0.86
PDLIM5-215ENST00000511586 PEAK1Q9H792 1746 aa9.7□□□□□ -0.86
PDLIM5-215ENST00000511586 BRWD3Q6RI45 1802 aa9.7□□□□□ -0.86
PDLIM5-215ENST00000511586 MAP2P11137 1827 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 MTHFSP49914 203 aa9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 DDX10Q13206 875 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 SF3B2Q13435 895 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 EIF4A2Q14240 407 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 RAPGEF4Q8WZA2 1011 aa9.69□□□□□ -0.86
PDLIM5-215ENST00000511586 FAM208AQ9UK61 1670 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-215ENST00000511586 USHBP1Q8N6Y0 703 aa9.68□□□□□ -0.86
PDLIM5-215ENST00000511586 MARCH10Q8NA82 808 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-215ENST00000511586 EYA1Q99502 592 aa9.68□□□□□ -0.86
PDLIM5-215ENST00000511586 PARP4Q9UKK3 1724 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-215ENST00000511586 TATP17735 454 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-215ENST00000511586 OVOS2A0A0G2JMS6 1433 aa9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 TNS2Q63HR2 1409 aa9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 TRIM37O94972 964 aa9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 ZCRB1Q8TBF4 217 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 DDX54Q8TDD1 881 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 LRRC37A3O60309 1634 aa9.66□□□□□ -0.86
PDLIM5-215ENST00000511586 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
PDLIM5-215ENST00000511586 IL13P35225 146 aa9.65□□□□□ -0.86
PDLIM5-215ENST00000511586 BCL9O00512 1426 aa9.65□□□□□ -0.87
PDLIM5-215ENST00000511586 NCAPD2Q15021 1401 aa9.65□□□□□ -0.87
PDLIM5-215ENST00000511586 IGSF1Q8N6C5 1336 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 WNK3Q9BYP7 1800 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 PPP2R1AP30153 589 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 BAG6P46379 1132 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 MEGF6O75095 1541 aa9.64□□□□□ -0.87
PDLIM5-215ENST00000511586 EP400Q96L91 3159 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms