RNA–Protein interactions for RNA: ENST00000510481.5

CCDC110-208, Transcript of coiled-coil domain containing 110, humanhuman

TSL 2

Gene CCDC110, Length 788 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-208ENST00000510481 PLSCR1O15162 318 aa11.34□□□□□ -0.59
CCDC110-208ENST00000510481 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
CCDC110-208ENST00000510481 WNK3Q9BYP7 1800 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 SENP3-EIF4A1A0A087X0R7 540 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 KDM2AQ9Y2K7 1162 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 THRAP3Q9Y2W1 955 aaKnown RBP11.33□□□□□ -0.6
CCDC110-208ENST00000510481 CRB1P82279 1406 aa11.33□□□□□ -0.6
CCDC110-208ENST00000510481 COL18A1P39060 1754 aa11.32□□□□□ -0.6
CCDC110-208ENST00000510481 ABTB2Q8N961 1025 aa11.32□□□□□ -0.6
CCDC110-208ENST00000510481 MARCH10Q8NA82 808 aaPredicted RBP11.32□□□□□ -0.6
CCDC110-208ENST00000510481 FHDC1Q9C0D6 1143 aaPredicted RBP11.32□□□□□ -0.6
CCDC110-208ENST00000510481 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
CCDC110-208ENST00000510481 GCP02774 474 aa11.31□□□□□ -0.6
CCDC110-208ENST00000510481 C1QTNF8P60827 252 aa11.31□□□□□ -0.6
CCDC110-208ENST00000510481 SYT17Q9BSW7 474 aa11.31□□□□□ -0.6
CCDC110-208ENST00000510481 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
CCDC110-208ENST00000510481 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
CCDC110-208ENST00000510481 DCAF11Q8TEB1 546 aa11.3□□□□□ -0.6
CCDC110-208ENST00000510481 BCL11BQ9C0K0 894 aaPredicted RBP11.3□□□□□ -0.6
CCDC110-208ENST00000510481 SLIT3O75094 1523 aa11.3□□□□□ -0.6
CCDC110-208ENST00000510481 CHD4Q14839 1912 aa11.29□□□□□ -0.6
CCDC110-208ENST00000510481 GOLGB1Q14789 3259 aaKnown RBP11.29□□□□□ -0.6
CCDC110-208ENST00000510481 ZBTB7CA1YPR0 619 aa11.29□□□□□ -0.6
CCDC110-208ENST00000510481 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
CCDC110-208ENST00000510481 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 PAPPAQ13219 1627 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 SLC15A2Q16348 729 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 DDB1Q16531 1140 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 TXNRD1Q16881 649 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 IFFO2Q5TF58 517 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 CCDC61Q9Y6R9 512 aa11.28□□□□□ -0.6
CCDC110-208ENST00000510481 BCL9O00512 1426 aa11.27□□□□□ -0.6
CCDC110-208ENST00000510481 RGPD5Q99666 1765 aa11.27□□□□□ -0.61
CCDC110-208ENST00000510481 AATKQ6ZMQ8 1374 aa11.27□□□□□ -0.61
CCDC110-208ENST00000510481 PIK3C2AO00443 1686 aa11.27□□□□□ -0.61
CCDC110-208ENST00000510481 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
CCDC110-208ENST00000510481 NLRP13Q86W25 1043 aa11.26□□□□□ -0.61
CCDC110-208ENST00000510481 C11orf95C9JLR9 678 aaPredicted RBP11.25□□□□□ -0.61
CCDC110-208ENST00000510481 TOM1L2Q6ZVM7 507 aa11.25□□□□□ -0.61
CCDC110-208ENST00000510481 MTFR1LQ9H019 292 aa11.25□□□□□ -0.61
CCDC110-208ENST00000510481 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
CCDC110-208ENST00000510481 SHANK3Q9BYB0 1731 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 CABP2Q9NPB3 220 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 RAB3GAP2Q9H2M9 1393 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 USP6P35125 1406 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 NHSQ6T4R5 1651 aa11.24□□□□□ -0.61
CCDC110-208ENST00000510481 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
CCDC110-208ENST00000510481 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
CCDC110-208ENST00000510481 CPSF1Q10570 1443 aaKnown RBP11.23□□□□□ -0.61
CCDC110-208ENST00000510481 NLRP6P59044 892 aa11.22□□□□□ -0.61
CCDC110-208ENST00000510481 ARXQ96QS3 562 aa11.22□□□□□ -0.61
CCDC110-208ENST00000510481 MAP3K5Q99683 1374 aa11.22□□□□□ -0.61
CCDC110-208ENST00000510481 TRPM1Q7Z4N2 1603 aa11.21□□□□□ -0.61
CCDC110-208ENST00000510481 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.61
CCDC110-208ENST00000510481 ACSBG1Q96GR2 724 aa11.21□□□□□ -0.61
CCDC110-208ENST00000510481 LRRC4BQ9NT99 713 aa11.21□□□□□ -0.61
CCDC110-208ENST00000510481 U3KPZ7 1027 aaPredicted RBP11.21□□□□□ -0.61
CCDC110-208ENST00000510481 COL24A1Q17RW2 1714 aa11.21□□□□□ -0.62
CCDC110-208ENST00000510481 TNS2Q63HR2 1409 aa11.2□□□□□ -0.62
CCDC110-208ENST00000510481 SRPK2P78362 688 aaKnown RBP11.2□□□□□ -0.62
CCDC110-208ENST00000510481 CARD10Q9BWT7 1032 aa11.2□□□□□ -0.62
CCDC110-208ENST00000510481 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
CCDC110-208ENST00000510481 BTAF1O14981 1849 aa11.2□□□□□ -0.62
CCDC110-208ENST00000510481 KIAA1210Q9ULL0 1709 aa11.2□□□□□ -0.62
CCDC110-208ENST00000510481 NFAT5O94916 1531 aa11.19□□□□□ -0.62
CCDC110-208ENST00000510481 TUBGCP6Q96RT7 1819 aa11.19□□□□□ -0.62
CCDC110-208ENST00000510481 QRICH2Q9H0J4 1663 aa11.19□□□□□ -0.62
CCDC110-208ENST00000510481 BRD4O60885 1362 aaPredicted RBP11.18□□□□□ -0.62
CCDC110-208ENST00000510481 SOX12O15370 315 aa11.18□□□□□ -0.62
CCDC110-208ENST00000510481 GIGYF1O75420 1035 aaPredicted RBP11.18□□□□□ -0.62
CCDC110-208ENST00000510481 GPR162Q16538 588 aa11.18□□□□□ -0.62
CCDC110-208ENST00000510481 NLGN2Q8NFZ4 835 aa11.18□□□□□ -0.62
CCDC110-208ENST00000510481 ABCC6O95255 1503 aa11.18□□□□□ -0.62
CCDC110-208ENST00000510481 EXOC5O00471 708 aa11.17□□□□□ -0.62
CCDC110-208ENST00000510481 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
CCDC110-208ENST00000510481 STAC3Q96MF2 364 aa11.17□□□□□ -0.62
CCDC110-208ENST00000510481 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
CCDC110-208ENST00000510481 CENPJQ9HC77 1338 aaPredicted RBP11.16□□□□□ -0.62
CCDC110-208ENST00000510481 QSER1Q2KHR3 1735 aa11.16□□□□□ -0.62
CCDC110-208ENST00000510481 HAX1O00165 279 aa11.16□□□□□ -0.62
CCDC110-208ENST00000510481 YBX3P16989 372 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCDC110-208ENST00000510481 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
CCDC110-208ENST00000510481 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
CCDC110-208ENST00000510481 CSB-PGBD3P0DP91 1061 aa11.15□□□□□ -0.62
CCDC110-208ENST00000510481 KCNQ4P56696 695 aa11.15□□□□□ -0.62
CCDC110-208ENST00000510481 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
CCDC110-208ENST00000510481 LHX8Q68G74 356 aa11.14□□□□□ -0.63
CCDC110-208ENST00000510481 PELP1Q8IZL8 1130 aaKnown RBP11.14□□□□□ -0.63
CCDC110-208ENST00000510481 CCDC7Q96M83 1385 aa11.14□□□□□ -0.63
CCDC110-208ENST00000510481 ERBB3P21860 1342 aa11.11□□□□□ -0.63
CCDC110-208ENST00000510481 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
CCDC110-208ENST00000510481 KCNH5Q8NCM2 988 aa11.1□□□□□ -0.63
CCDC110-208ENST00000510481 NSD2O96028 1365 aa11.1□□□□□ -0.63
CCDC110-208ENST00000510481 USP54Q70EL1 1684 aa11.1□□□□□ -0.63
CCDC110-208ENST00000510481 LTN1O94822 1766 aa11.1□□□□□ -0.63
CCDC110-208ENST00000510481 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
CCDC110-208ENST00000510481 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms