RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
SNF8-207ENST00000509995 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
SNF8-207ENST00000509995 CAPN15O75808 1086 aa16.32■□□□□ 0.2
SNF8-207ENST00000509995 PCNTO95613 3336 aa16.32■□□□□ 0.2
SNF8-207ENST00000509995 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
SNF8-207ENST00000509995 ADCY9O60503 1353 aa16.31■□□□□ 0.2
SNF8-207ENST00000509995 GRIN3BO60391 1043 aa16.31■□□□□ 0.2
SNF8-207ENST00000509995 YBX3P16989 372 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■□□□ 12.9
SNF8-207ENST00000509995 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
SNF8-207ENST00000509995 MARCH10Q8NA82 808 aaPredicted RBP16.31■□□□□ 0.2
SNF8-207ENST00000509995 NLGN2Q8NFZ4 835 aa16.31■□□□□ 0.2
SNF8-207ENST00000509995 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
SNF8-207ENST00000509995 USP19O94966 1318 aa16.3■□□□□ 0.2
SNF8-207ENST00000509995 MINK1Q8N4C8 1332 aaPredicted RBP16.3■□□□□ 0.2
SNF8-207ENST00000509995 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
SNF8-207ENST00000509995 ADGRB1O14514 1584 aa16.27■□□□□ 0.2
SNF8-207ENST00000509995 POLD1P28340 1107 aa16.27■□□□□ 0.2
SNF8-207ENST00000509995 ZNF827Q17R98 1081 aa16.27■□□□□ 0.2
SNF8-207ENST00000509995 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
SNF8-207ENST00000509995 APLP1P51693 650 aa16.26■□□□□ 0.19
SNF8-207ENST00000509995 PRELPP51888 382 aa16.26■□□□□ 0.19
SNF8-207ENST00000509995 ZNF526Q8TF50 670 aaPredicted RBP16.26■□□□□ 0.19
SNF8-207ENST00000509995 TUBGCP6Q96RT7 1819 aa16.25■□□□□ 0.19
SNF8-207ENST00000509995 SLC16A10Q8TF71 515 aa16.25■□□□□ 0.19
SNF8-207ENST00000509995 POLR3AO14802 1390 aaPredicted RBP16.25■□□□□ 0.19
SNF8-207ENST00000509995 BTAF1O14981 1849 aa16.24■□□□□ 0.19
SNF8-207ENST00000509995 SLC34A2O95436 690 aa16.24■□□□□ 0.19
SNF8-207ENST00000509995 DNAJC5GQ8N7S2 189 aa16.24■□□□□ 0.19
SNF8-207ENST00000509995 GCP02774 474 aa16.23■□□□□ 0.19
SNF8-207ENST00000509995 TOM1L2Q6ZVM7 507 aa16.23■□□□□ 0.19
SNF8-207ENST00000509995 ABTB2Q8N961 1025 aa16.23■□□□□ 0.19
SNF8-207ENST00000509995 CDCA7Q9BWT1 371 aaPredicted RBP16.23■□□□□ 0.19
SNF8-207ENST00000509995 NUDT16Q96DE0 195 aaKnown RBP16.22■□□□□ 0.19
SNF8-207ENST00000509995 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
SNF8-207ENST00000509995 COL18A1P39060 1754 aa16.22■□□□□ 0.19
SNF8-207ENST00000509995 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
SNF8-207ENST00000509995 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
SNF8-207ENST00000509995 TNS4Q8IZW8 715 aa16.21■□□□□ 0.19
SNF8-207ENST00000509995 ACEP12821 1306 aa16.2■□□□□ 0.18
SNF8-207ENST00000509995 KIF3CO14782 793 aa16.2■□□□□ 0.18
SNF8-207ENST00000509995 BRD4O60885 1362 aaPredicted RBP16.2■□□□□ 0.18
SNF8-207ENST00000509995 TNS2Q63HR2 1409 aa16.19■□□□□ 0.18
SNF8-207ENST00000509995 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
SNF8-207ENST00000509995 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
SNF8-207ENST00000509995 ZBTB7CA1YPR0 619 aa16.18■□□□□ 0.18
SNF8-207ENST00000509995 NLRP13Q86W25 1043 aa16.18■□□□□ 0.18
SNF8-207ENST00000509995 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
SNF8-207ENST00000509995 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
SNF8-207ENST00000509995 SLIT3O75094 1523 aa16.17■□□□□ 0.18
SNF8-207ENST00000509995 ABCC6O95255 1503 aa16.17■□□□□ 0.18
SNF8-207ENST00000509995 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
SNF8-207ENST00000509995 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
SNF8-207ENST00000509995 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
SNF8-207ENST00000509995 EXOC5O00471 708 aa16.15■□□□□ 0.18
SNF8-207ENST00000509995 USP6P35125 1406 aa16.15■□□□□ 0.18
SNF8-207ENST00000509995 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
SNF8-207ENST00000509995 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
SNF8-207ENST00000509995 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
SNF8-207ENST00000509995 CARD10Q9BWT7 1032 aa16.12■□□□□ 0.17
SNF8-207ENST00000509995 AXIN2Q9Y2T1 843 aa16.12■□□□□ 0.17
SNF8-207ENST00000509995 CCDC61Q9Y6R9 512 aa16.12■□□□□ 0.17
SNF8-207ENST00000509995 CPSF1Q10570 1443 aaKnown RBP16.11■□□□□ 0.17
SNF8-207ENST00000509995 KLRG1Q96E93 195 aa16.11■□□□□ 0.17
SNF8-207ENST00000509995 TFCP2L1Q9NZI6 479 aa16.11■□□□□ 0.17
SNF8-207ENST00000509995 TOMM70O94826 608 aa16.1■□□□□ 0.17
SNF8-207ENST00000509995 SLC27A3Q5K4L6 730 aa16.1■□□□□ 0.17
SNF8-207ENST00000509995 CDK19Q9BWU1 502 aa16.1■□□□□ 0.17
SNF8-207ENST00000509995 PIK3C2AO00443 1686 aa16.09■□□□□ 0.17
SNF8-207ENST00000509995 CCDC7Q96M83 1385 aa16.09■□□□□ 0.17
SNF8-207ENST00000509995 PPIP5K1Q6PFW1 1433 aa16.09■□□□□ 0.17
SNF8-207ENST00000509995 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
SNF8-207ENST00000509995 LY75O60449 1722 aa16.06■□□□□ 0.16
SNF8-207ENST00000509995 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
SNF8-207ENST00000509995 CSB-PGBD3P0DP91 1061 aa16.06■□□□□ 0.16
SNF8-207ENST00000509995 NLRP6P59044 892 aa16.05■□□□□ 0.16
SNF8-207ENST00000509995 HTRA3P83110 453 aa16.05■□□□□ 0.16
SNF8-207ENST00000509995 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
SNF8-207ENST00000509995 PCDH10Q9P2E7 1040 aa16.04■□□□□ 0.16
SNF8-207ENST00000509995 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
SNF8-207ENST00000509995 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.16
SNF8-207ENST00000509995 MSL1Q68DK7 614 aa16.02■□□□□ 0.16
SNF8-207ENST00000509995 ARHGEF25Q86VW2 580 aa16.02■□□□□ 0.16
SNF8-207ENST00000509995 KCNQ4P56696 695 aa16.01■□□□□ 0.15
SNF8-207ENST00000509995 IGSF1Q8N6C5 1336 aa16■□□□□ 0.15
SNF8-207ENST00000509995 MSH5O43196 834 aa16■□□□□ 0.15
SNF8-207ENST00000509995 COL23A1Q86Y22 540 aaPredicted RBP16■□□□□ 0.15
SNF8-207ENST00000509995 RBM46Q8TBY0 533 aaKnown RBP15.99■□□□□ 0.15
SNF8-207ENST00000509995 NFAT5O94916 1531 aa15.99■□□□□ 0.15
SNF8-207ENST00000509995 PPARGC1BQ86YN6 1023 aaKnown RBP15.98■□□□□ 0.15
SNF8-207ENST00000509995 DOT1LQ8TEK3 1739 aa15.98■□□□□ 0.15
SNF8-207ENST00000509995 IL2RBP14784 551 aa15.97■□□□□ 0.15
SNF8-207ENST00000509995 NMRK2Q9NPI5 230 aa15.97■□□□□ 0.15
SNF8-207ENST00000509995 C5P01031 1676 aa15.95■□□□□ 0.14
SNF8-207ENST00000509995 HSPA1AP0DMV8 641 aaKnown RBP15.95■□□□□ 0.14
SNF8-207ENST00000509995 HSPA1BP0DMV9 641 aaKnown RBP15.95■□□□□ 0.14
SNF8-207ENST00000509995 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
SNF8-207ENST00000509995 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
SNF8-207ENST00000509995 FSTL1Q12841 308 aa15.94■□□□□ 0.14
SNF8-207ENST00000509995 ERBB3P21860 1342 aa15.94■□□□□ 0.14
SNF8-207ENST00000509995 NSD2O96028 1365 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms