RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CDC14CA4D256 554 aa7.05□□□□□ -1.28
XRCC4-204ENST00000509268 PLA2G4EQ3MJ16 856 aa7.05□□□□□ -1.28
XRCC4-204ENST00000509268 NBPF14Q5TI25 921 aa7.05□□□□□ -1.28
XRCC4-204ENST00000509268 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
XRCC4-204ENST00000509268 RSBN1LQ6PCB5 846 aaPredicted RBP7.05□□□□□ -1.28
XRCC4-204ENST00000509268 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-204ENST00000509268 HRCP23327 699 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 DCAF5Q96JK2 942 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-204ENST00000509268 SH3BP5LQ7L8J4 393 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
XRCC4-204ENST00000509268 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
XRCC4-204ENST00000509268 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.29
XRCC4-204ENST00000509268 BEGAINQ9BUH8 593 aa7.02□□□□□ -1.29
XRCC4-204ENST00000509268 CBLBQ13191 982 aa7.01□□□□□ -1.29
XRCC4-204ENST00000509268 TTLL12Q14166 644 aaPredicted RBP7.01□□□□□ -1.29
XRCC4-204ENST00000509268 DHX9Q08211 1270 aaKnown RBP7□□□□□ -1.29
XRCC4-204ENST00000509268 PER1O15534 1290 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-204ENST00000509268 AMHR2Q16671 573 aa6.99□□□□□ -1.29
XRCC4-204ENST00000509268 PODNQ7Z5L7 613 aa6.99□□□□□ -1.29
XRCC4-204ENST00000509268 CDV3Q9UKY7 258 aaKnown RBP6.99□□□□□ -1.29
XRCC4-204ENST00000509268 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
XRCC4-204ENST00000509268 GALNT6Q8NCL4 622 aa6.99□□□□□ -1.29
XRCC4-204ENST00000509268 CNTNAP5Q8WYK1 1306 aa6.98□□□□□ -1.29
XRCC4-204ENST00000509268 MAGEB6P1A0A0J9YX57 407 aa6.98□□□□□ -1.29
XRCC4-204ENST00000509268 K7ELQ4 463 aaPredicted RBP6.98□□□□□ -1.29
XRCC4-204ENST00000509268 PROCP04070 461 aa6.98□□□□□ -1.29
XRCC4-204ENST00000509268 GIGYF2Q6Y7W6 1299 aaKnown RBP6.98□□□□□ -1.29
XRCC4-204ENST00000509268 RIC3Q7Z5B4 369 aa6.98□□□□□ -1.29
XRCC4-204ENST00000509268 GMCL1Q96IK5 515 aa6.98□□□□□ -1.29
XRCC4-204ENST00000509268 SENP3-EIF4A1A0A087X0R7 540 aa6.97□□□□□ -1.29
XRCC4-204ENST00000509268 ITGB2P05107 769 aa6.97□□□□□ -1.29
XRCC4-204ENST00000509268 ERFEQ4G0M1 354 aa6.97□□□□□ -1.29
XRCC4-204ENST00000509268 GAS6Q14393 721 aa6.96□□□□□ -1.29
XRCC4-204ENST00000509268 RNF217Q8TC41 542 aa6.96□□□□□ -1.29
XRCC4-204ENST00000509268 INSM2Q96T92 566 aaPredicted RBP6.96□□□□□ -1.29
XRCC4-204ENST00000509268 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.29
XRCC4-204ENST00000509268 MBIPQ9NS73 344 aa6.96□□□□□ -1.29
XRCC4-204ENST00000509268 BCRP11274 1271 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 TUSC1Q2TAM9 212 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 CABLES1Q8TDN4 633 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 KCTD15Q96SI1 283 aaPredicted RBP6.95□□□□□ -1.3
XRCC4-204ENST00000509268 LRRC4BQ9NT99 713 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 RELBQ01201 579 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 FOXR1Q6PIV2 292 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 NEDD1Q8NHV4 660 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 AGBL1Q96MI9 1066 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 PSMG3-AS1Q96PY0 264 aa6.95□□□□□ -1.3
XRCC4-204ENST00000509268 CARD14Q9BXL6 1004 aa6.94□□□□□ -1.3
XRCC4-204ENST00000509268 PLCB2Q00722 1185 aa6.93□□□□□ -1.3
XRCC4-204ENST00000509268 PDXDC2PQ6P474 469 aa6.93□□□□□ -1.3
XRCC4-204ENST00000509268 Q8N3U1 123 aa6.93□□□□□ -1.3
XRCC4-204ENST00000509268 TSC1Q92574 1164 aa6.93□□□□□ -1.3
XRCC4-204ENST00000509268 KDM2AQ9Y2K7 1162 aa6.93□□□□□ -1.3
XRCC4-204ENST00000509268 NUTM2BA6NNL0 878 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 NUTM2EB1AL46 878 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 NUTM2DQ5VT03 806 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 ALYREFQ86V81 257 aaKnown RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 NUTM2AQ8IVF1 878 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 HELBQ8NG08 1087 aaPredicted RBP6.92□□□□□ -1.3
XRCC4-204ENST00000509268 SLC10A4Q96EP9 437 aa6.92□□□□□ -1.3
XRCC4-204ENST00000509268 IGF1RP08069 1367 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 LILRB3O75022 631 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 BAG6P46379 1132 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 TRIM22Q8IYM9 498 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 ARHGAP9Q9BRR9 750 aa6.91□□□□□ -1.3
XRCC4-204ENST00000509268 ZNF395Q9H8N7 513 aaPredicted RBP6.91□□□□□ -1.3
XRCC4-204ENST00000509268 CUEDC1Q9NWM3 386 aaPredicted RBP6.91□□□□□ -1.3
XRCC4-204ENST00000509268 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.31
XRCC4-204ENST00000509268 PTGIRP43119 386 aa6.89□□□□□ -1.31
XRCC4-204ENST00000509268 INTS6LQ5JSJ4 861 aaKnown RBP6.89□□□□□ -1.31
XRCC4-204ENST00000509268 FOXD4L5Q5VV16 416 aaPredicted RBP6.89□□□□□ -1.31
XRCC4-204ENST00000509268 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
XRCC4-204ENST00000509268 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
XRCC4-204ENST00000509268 ADH1AP07327 375 aa6.88□□□□□ -1.31
XRCC4-204ENST00000509268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.88□□□□□ -1.31
XRCC4-204ENST00000509268 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
XRCC4-204ENST00000509268 TRIM52Q96A61 297 aa6.88□□□□□ -1.31
XRCC4-204ENST00000509268 ACDQ96AP0 544 aa6.88□□□□□ -1.31
XRCC4-204ENST00000509268 ZNF837Q96EG3 531 aaPredicted RBP6.88□□□□□ -1.31
XRCC4-204ENST00000509268 NSFL1CQ9UNZ2 370 aaKnown RBP6.88□□□□□ -1.31
XRCC4-204ENST00000509268 QPCTQ16769 361 aa6.87□□□□□ -1.31
XRCC4-204ENST00000509268 ZC3H4Q9UPT8 1303 aaKnown RBP6.87□□□□□ -1.31
XRCC4-204ENST00000509268 H7C1W4 665 aa6.86□□□□□ -1.31
XRCC4-204ENST00000509268 ZMYND10O75800 440 aa6.86□□□□□ -1.31
XRCC4-204ENST00000509268 RNF144AP50876 292 aaPredicted RBP6.86□□□□□ -1.31
XRCC4-204ENST00000509268 TRERF1Q96PN7 1200 aa6.86□□□□□ -1.31
XRCC4-204ENST00000509268 LIMD1Q9UGP4 676 aa6.86□□□□□ -1.31
XRCC4-204ENST00000509268 FKBPLQ9UIM3 349 aa6.86□□□□□ -1.31
XRCC4-204ENST00000509268 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
XRCC4-204ENST00000509268 KRBA1A5PL33 1030 aa6.85□□□□□ -1.31
XRCC4-204ENST00000509268 OIP5O43482 229 aa6.85□□□□□ -1.31
XRCC4-204ENST00000509268 DBN1Q16643 649 aa6.85□□□□□ -1.31
XRCC4-204ENST00000509268 PARP9Q8IXQ6 854 aa6.85□□□□□ -1.31
XRCC4-204ENST00000509268 GPSM3Q9Y4H4 160 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms