RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 TTLL8A6PVC2 850 aa11.48□□□□□ -0.57
TRAPPC13-209ENST00000508304 PGPEP1Q9NXJ5 209 aa11.47□□□□□ -0.57
TRAPPC13-209ENST00000508304 FKBPLQ9UIM3 349 aa11.47□□□□□ -0.57
TRAPPC13-209ENST00000508304 CBLBQ13191 982 aa11.46□□□□□ -0.57
TRAPPC13-209ENST00000508304 LRRN4Q8WUT4 740 aa11.46□□□□□ -0.57
TRAPPC13-209ENST00000508304 ARHGAP9Q9BRR9 750 aa11.46□□□□□ -0.57
TRAPPC13-209ENST00000508304 SPINT1O43278 529 aa11.45□□□□□ -0.58
TRAPPC13-209ENST00000508304 PTSQ03393 145 aa11.45□□□□□ -0.58
TRAPPC13-209ENST00000508304 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC13-209ENST00000508304 CDV3Q9UKY7 258 aaKnown RBP11.45□□□□□ -0.58
TRAPPC13-209ENST00000508304 KRT76Q01546 638 aa11.44□□□□□ -0.58
TRAPPC13-209ENST00000508304 GPR161Q8N6U8 529 aaKnown RBP11.44□□□□□ -0.58
TRAPPC13-209ENST00000508304 SLC10A4Q96EP9 437 aa11.44□□□□□ -0.58
TRAPPC13-209ENST00000508304 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC13-209ENST00000508304 ZC3H4Q9UPT8 1303 aaKnown RBP11.43□□□□□ -0.58
TRAPPC13-209ENST00000508304 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
TRAPPC13-209ENST00000508304 FIGNL2A6NMB9 653 aa11.41□□□□□ -0.58
TRAPPC13-209ENST00000508304 DHX9Q08211 1270 aaKnown RBP11.41□□□□□ -0.58
TRAPPC13-209ENST00000508304 NR6A1Q15406 480 aa11.41□□□□□ -0.58
TRAPPC13-209ENST00000508304 SKIV2LQ15477 1246 aaKnown RBP11.41□□□□□ -0.58
TRAPPC13-209ENST00000508304 NANOS1Q8WY41 292 aaKnown RBP11.41□□□□□ -0.58
TRAPPC13-209ENST00000508304 GSK3AP49840 483 aa11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 KCNMA1Q12791 1236 aa11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 SH3D19Q5HYK7 790 aa11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 INTS6LQ5JSJ4 861 aaKnown RBP11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 ZBTB33Q86T24 672 aa11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAPPC13-209ENST00000508304 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
TRAPPC13-209ENST00000508304 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC13-209ENST00000508304 CNTNAP3BQ96NU0 1288 aa11.38□□□□□ -0.59
TRAPPC13-209ENST00000508304 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
TRAPPC13-209ENST00000508304 GPSM3Q9Y4H4 160 aa11.38□□□□□ -0.59
TRAPPC13-209ENST00000508304 SLC35F4A4IF30 521 aa11.37□□□□□ -0.59
TRAPPC13-209ENST00000508304 PTK2Q05397 1052 aa11.37□□□□□ -0.59
TRAPPC13-209ENST00000508304 AGBL1Q96MI9 1066 aa11.36□□□□□ -0.59
TRAPPC13-209ENST00000508304 COL25A1Q9BXS0 654 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC13-209ENST00000508304 CTSOP43234 321 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC13-209ENST00000508304 ADAM32Q8TC27 787 aa11.35□□□□□ -0.59
TRAPPC13-209ENST00000508304 RELBQ01201 579 aa11.33□□□□□ -0.6
TRAPPC13-209ENST00000508304 RNFT1Q5M7Z0 435 aa11.33□□□□□ -0.6
TRAPPC13-209ENST00000508304 INSM2Q96T92 566 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC13-209ENST00000508304 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
TRAPPC13-209ENST00000508304 ITGA6P23229 1130 aa11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC13-209ENST00000508304 AP1G2O75843 785 aa11.31□□□□□ -0.6
TRAPPC13-209ENST00000508304 RNF217Q8TC41 542 aa11.31□□□□□ -0.6
TRAPPC13-209ENST00000508304 TMPRSS4Q9NRS4 437 aa11.31□□□□□ -0.6
TRAPPC13-209ENST00000508304 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
TRAPPC13-209ENST00000508304 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC13-209ENST00000508304 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
TRAPPC13-209ENST00000508304 LOC100996750A0A140TA64 210 aa11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 VWA5B2Q8N398 1253 aa11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 KRTAP4-6Q9BYQ5 205 aa11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 ZNF395Q9H8N7 513 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 HMX1Q9NP08 348 aaPredicted RBP11.29□□□□□ -0.6
TRAPPC13-209ENST00000508304 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
TRAPPC13-209ENST00000508304 LILRA1O75019 489 aa11.28□□□□□ -0.6
TRAPPC13-209ENST00000508304 ADH1AP07327 375 aa11.28□□□□□ -0.6
TRAPPC13-209ENST00000508304 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
TRAPPC13-209ENST00000508304 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
TRAPPC13-209ENST00000508304 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
TRAPPC13-209ENST00000508304 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC13-209ENST00000508304 PNMA1Q8ND90 353 aa11.27□□□□□ -0.61
TRAPPC13-209ENST00000508304 CDC14CA4D256 554 aa11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 ESPNB1AK53 854 aa11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 ERVH48-1M5A8F1 160 aa11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 RASSF7Q02833 373 aa11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 FOXD4L5Q5VV16 416 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 ATP1B4Q9UN42 357 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC13-209ENST00000508304 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC13-209ENST00000508304 DZIP3Q86Y13 1208 aaKnown RBP11.25□□□□□ -0.61
TRAPPC13-209ENST00000508304 TMEM151AQ8N4L1 468 aa11.25□□□□□ -0.61
TRAPPC13-209ENST00000508304 SVOPQ8N4V2 548 aa11.25□□□□□ -0.61
TRAPPC13-209ENST00000508304 WHAMMQ8TF30 809 aa11.25□□□□□ -0.61
TRAPPC13-209ENST00000508304 GDF11O95390 407 aa11.24□□□□□ -0.61
TRAPPC13-209ENST00000508304 PTGIRP43119 386 aa11.24□□□□□ -0.61
TRAPPC13-209ENST00000508304 RAB15P59190 212 aa11.24□□□□□ -0.61
TRAPPC13-209ENST00000508304 ARHGEF15O94989 841 aa11.23□□□□□ -0.61
TRAPPC13-209ENST00000508304 RFC5P40937 340 aa11.21□□□□□ -0.61
TRAPPC13-209ENST00000508304 SUZ12Q15022 739 aaKnown RBP11.21□□□□□ -0.61
TRAPPC13-209ENST00000508304 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
TRAPPC13-209ENST00000508304 LYSMD3Q7Z3D4 306 aa11.19□□□□□ -0.62
TRAPPC13-209ENST00000508304 TRIM34Q9BYJ4 488 aa11.19□□□□□ -0.62
TRAPPC13-209ENST00000508304 CYLDQ9NQC7 956 aa11.17□□□□□ -0.62
TRAPPC13-209ENST00000508304 CUEDC1Q9NWM3 386 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC13-209ENST00000508304 ADAMTS2O95450 1211 aa11.16□□□□□ -0.62
TRAPPC13-209ENST00000508304 RNF144AP50876 292 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC13-209ENST00000508304 SRSF11Q05519 484 aaKnown RBP11.15□□□□□ -0.62
TRAPPC13-209ENST00000508304 GAS6Q14393 721 aa11.15□□□□□ -0.62
TRAPPC13-209ENST00000508304 LYPD4Q6UWN0 246 aa11.14□□□□□ -0.63
TRAPPC13-209ENST00000508304 TRIM52Q96A61 297 aa11.14□□□□□ -0.63
TRAPPC13-209ENST00000508304 IRS1P35568 1242 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms