RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 PTPRKQ15262 1439 aa8□□□□□ -1.13
SNX25-203ENST00000504959 TCOF1Q13428 1488 aaKnown RBP8□□□□□ -1.13
SNX25-203ENST00000504959 E9PSI1 815 aa8□□□□□ -1.13
SNX25-203ENST00000504959 GCGRP47871 477 aa8□□□□□ -1.13
SNX25-203ENST00000504959 MIA2Q96PC5 1412 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 PPP1R3GB7ZBB8 358 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 CFAP99D6REC4 459 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 SND1Q7KZF4 910 aaKnown RBP eCLIP7.99□□□□□ -1.13
SNX25-203ENST00000504959 YTHDC1Q96MU7 727 aaKnown RBP7.99□□□□□ -1.13
SNX25-203ENST00000504959 VRTNQ9H8Y1 702 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 BCL2L12Q9HB09 334 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 CHIC2Q9UKJ5 165 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 NAIPQ13075 1403 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 UACAQ9BZF9 1416 aa7.99□□□□□ -1.13
SNX25-203ENST00000504959 NUP153P49790 1475 aaKnown RBP7.99□□□□□ -1.13
SNX25-203ENST00000504959 TRIM6-TRIM34B2RNG4 842 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 HRO43593 1189 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 USP46P62068 366 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 MTMR2Q13614 643 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
SNX25-203ENST00000504959 RRP7BPQ9NSQ0 103 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 ITSN2Q9NZM3 1697 aa7.98□□□□□ -1.13
SNX25-203ENST00000504959 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
SNX25-203ENST00000504959 NUP160Q12769 1436 aa7.97□□□□□ -1.13
SNX25-203ENST00000504959 ATG7O95352 703 aa7.97□□□□□ -1.13
SNX25-203ENST00000504959 SLC10A3P09131 477 aa7.97□□□□□ -1.13
SNX25-203ENST00000504959 CHD1O14646 1710 aa7.97□□□□□ -1.13
SNX25-203ENST00000504959 TONSLQ96HA7 1378 aa7.96□□□□□ -1.13
SNX25-203ENST00000504959 PROX2Q3B8N5 592 aa7.96□□□□□ -1.13
SNX25-203ENST00000504959 TBC1D9Q6ZT07 1266 aa7.96□□□□□ -1.13
SNX25-203ENST00000504959 TRIM52Q96A61 297 aa7.96□□□□□ -1.13
SNX25-203ENST00000504959 PACS2Q86VP3 889 aa7.96□□□□□ -1.14
SNX25-203ENST00000504959 KCNK17Q96T54 332 aa7.96□□□□□ -1.14
SNX25-203ENST00000504959 PLB1Q6P1J6 1458 aa7.95□□□□□ -1.14
SNX25-203ENST00000504959 DNMT1P26358 1616 aaKnown RBP7.95□□□□□ -1.14
SNX25-203ENST00000504959 PTPREP23469 700 aa7.95□□□□□ -1.14
SNX25-203ENST00000504959 HCSTQ9UBK5 93 aa7.95□□□□□ -1.14
SNX25-203ENST00000504959 AMOTL2Q9Y2J4 779 aa7.95□□□□□ -1.14
SNX25-203ENST00000504959 AKNAQ7Z591 1439 aa7.95□□□□□ -1.14
SNX25-203ENST00000504959 ADCY10Q96PN6 1610 aa7.94□□□□□ -1.14
SNX25-203ENST00000504959 KCNH8Q96L42 1107 aa7.94□□□□□ -1.14
SNX25-203ENST00000504959 TROQ12816 1431 aaPredicted RBP7.94□□□□□ -1.14
SNX25-203ENST00000504959 NR6A1Q15406 480 aa7.94□□□□□ -1.14
SNX25-203ENST00000504959 DAPK1P53355 1430 aa7.93□□□□□ -1.14
SNX25-203ENST00000504959 C6orf229H3BNL8 230 aa7.93□□□□□ -1.14
SNX25-203ENST00000504959 PRG4Q92954 1404 aaPredicted RBP7.93□□□□□ -1.14
SNX25-203ENST00000504959 ADGBQ8N7X0 1667 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 KDM6BO15054 1643 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 KIF14Q15058 1648 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 PER1O15534 1290 aaPredicted RBP7.92□□□□□ -1.14
SNX25-203ENST00000504959 SOX11P35716 441 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 SYMPKQ92797 1274 aaKnown RBP7.92□□□□□ -1.14
SNX25-203ENST00000504959 CFDP1Q9UEE9 299 aaPredicted RBP7.92□□□□□ -1.14
SNX25-203ENST00000504959 PLEKHD1A6NEE1 506 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 SLC4A5Q9BY07 1137 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 VPS9D1Q9Y2B5 631 aa7.92□□□□□ -1.14
SNX25-203ENST00000504959 ABCA8O94911 1581 aa7.91□□□□□ -1.14
SNX25-203ENST00000504959 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
SNX25-203ENST00000504959 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
SNX25-203ENST00000504959 GNEQ9Y223 722 aaKnown RBP7.91□□□□□ -1.14
SNX25-203ENST00000504959 ROCK1Q13464 1354 aa7.91□□□□□ -1.14
SNX25-203ENST00000504959 CAMSAP2Q08AD1 1489 aa7.91□□□□□ -1.14
SNX25-203ENST00000504959 ZNF644Q9H582 1327 aaPredicted RBP7.9□□□□□ -1.14
SNX25-203ENST00000504959 CLASP1Q7Z460 1538 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 ATP9BO43861 1147 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 FUT2Q10981 343 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 SLF2Q8IX21 1173 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 STK32AQ8WU08 396 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 CDC42BPAQ5VT25 1732 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 CROCC2H7BZ55 1655 aa7.9□□□□□ -1.14
SNX25-203ENST00000504959 ABCC5O15440 1437 aa7.9□□□□□ -1.15
SNX25-203ENST00000504959 RSPH4AQ5TD94 716 aa7.89□□□□□ -1.15
SNX25-203ENST00000504959 STAC3Q96MF2 364 aa7.89□□□□□ -1.15
SNX25-203ENST00000504959 PIK3CDO00329 1044 aa7.89□□□□□ -1.15
SNX25-203ENST00000504959 TMEM164Q5U3C3 297 aa7.89□□□□□ -1.15
SNX25-203ENST00000504959 KCTD12Q96CX2 325 aaKnown RBP7.89□□□□□ -1.15
SNX25-203ENST00000504959 MPHOSPH9Q99550 1183 aa7.89□□□□□ -1.15
SNX25-203ENST00000504959 GPATCH8Q9UKJ3 1502 aaKnown RBP7.89□□□□□ -1.15
SNX25-203ENST00000504959 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
SNX25-203ENST00000504959 PLA2G2EQ9NZK7 142 aa7.88□□□□□ -1.15
SNX25-203ENST00000504959 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
SNX25-203ENST00000504959 PTPRGP23470 1445 aa7.88□□□□□ -1.15
SNX25-203ENST00000504959 ATP10BO94823 1461 aa7.88□□□□□ -1.15
SNX25-203ENST00000504959 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
SNX25-203ENST00000504959 ZBED2Q9BTP6 218 aa7.87□□□□□ -1.15
SNX25-203ENST00000504959 HIRIP3Q9BW71 556 aaPredicted RBP7.87□□□□□ -1.15
SNX25-203ENST00000504959 EIF4G2P78344 907 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNX25-203ENST00000504959 BHMG1C9JSJ3 638 aaPredicted RBP7.85□□□□□ -1.15
SNX25-203ENST00000504959 MYT1Q01538 1121 aa7.85□□□□□ -1.15
SNX25-203ENST00000504959 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
SNX25-203ENST00000504959 SHROOM2Q13796 1616 aa7.85□□□□□ -1.15
SNX25-203ENST00000504959 ANKRD30AQ9BXX3 1397 aa7.85□□□□□ -1.15
SNX25-203ENST00000504959 FBXO45P0C2W1 286 aa7.85□□□□□ -1.15
SNX25-203ENST00000504959 ELOAQ14241 798 aaKnown RBP7.85□□□□□ -1.15
SNX25-203ENST00000504959 TXNDC2Q86VQ3 553 aa7.85□□□□□ -1.15
SNX25-203ENST00000504959 NOVA2Q9UNW9 492 aaKnown RBP7.85□□□□□ -1.15
SNX25-203ENST00000504959 DENND4BO75064 1496 aaPredicted RBP7.84□□□□□ -1.15
SNX25-203ENST00000504959 NCOA1Q15788 1441 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms