RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 TTBK1Q5TCY1 1321 aaPredicted RBP12.2□□□□□ -0.46
UBE2B-204ENST00000504431 TRAK2O60296 914 aa12.19□□□□□ -0.46
UBE2B-204ENST00000504431 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
UBE2B-204ENST00000504431 RANGAP1P46060 587 aaPredicted RBP12.18□□□□□ -0.46
UBE2B-204ENST00000504431 GPSM3Q9Y4H4 160 aa12.18□□□□□ -0.46
UBE2B-204ENST00000504431 PRXQ9BXM0 1461 aa12.18□□□□□ -0.46
UBE2B-204ENST00000504431 ARAP1Q96P48 1450 aa12.17□□□□□ -0.46
UBE2B-204ENST00000504431 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
UBE2B-204ENST00000504431 ZNF330Q9Y3S2 320 aaPredicted RBP12.17□□□□□ -0.46
UBE2B-204ENST00000504431 PRG4Q92954 1404 aaPredicted RBP12.17□□□□□ -0.46
UBE2B-204ENST00000504431 RPIAP49247 311 aa12.16□□□□□ -0.46
UBE2B-204ENST00000504431 PTK2Q05397 1052 aa12.16□□□□□ -0.46
UBE2B-204ENST00000504431 PTCRAQ6ISU1 281 aaPredicted RBP12.16□□□□□ -0.46
UBE2B-204ENST00000504431 PDXDC2PQ6P474 469 aa12.16□□□□□ -0.46
UBE2B-204ENST00000504431 ZNF592Q92610 1267 aa12.16□□□□□ -0.46
UBE2B-204ENST00000504431 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
UBE2B-204ENST00000504431 SHROOM2Q13796 1616 aa12.15□□□□□ -0.46
UBE2B-204ENST00000504431 A0A0G2JS52 829 aa12.14□□□□□ -0.47
UBE2B-204ENST00000504431 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
UBE2B-204ENST00000504431 GPR37L1O60883 481 aa12.14□□□□□ -0.47
UBE2B-204ENST00000504431 IRF5Q13568 498 aa12.14□□□□□ -0.47
UBE2B-204ENST00000504431 EEA1Q15075 1411 aa12.13□□□□□ -0.47
UBE2B-204ENST00000504431 SOX11P35716 441 aa12.12□□□□□ -0.47
UBE2B-204ENST00000504431 TRIM32Q13049 653 aa12.12□□□□□ -0.47
UBE2B-204ENST00000504431 NR1H3Q13133 447 aa12.12□□□□□ -0.47
UBE2B-204ENST00000504431 IQGAP2Q13576 1575 aa12.11□□□□□ -0.47
UBE2B-204ENST00000504431 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
UBE2B-204ENST00000504431 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
UBE2B-204ENST00000504431 ZNF511Q8NB15 262 aa12.11□□□□□ -0.47
UBE2B-204ENST00000504431 CTTNBP2Q8WZ74 1663 aa12.1□□□□□ -0.47
UBE2B-204ENST00000504431 WNT7BP56706 349 aa12.1□□□□□ -0.47
UBE2B-204ENST00000504431 EIF4G2P78344 907 aaKnown RBP eCLIP12.1□□□□□ -0.47
UBE2B-204ENST00000504431 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
UBE2B-204ENST00000504431 BAP1Q92560 729 aa12.1□□□□□ -0.47
UBE2B-204ENST00000504431 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
UBE2B-204ENST00000504431 AGERQ15109 404 aa12.09□□□□□ -0.47
UBE2B-204ENST00000504431 MCCD1P59942 119 aaPredicted RBP12.08□□□□□ -0.48
UBE2B-204ENST00000504431 VAC14Q08AM6 782 aa12.08□□□□□ -0.48
UBE2B-204ENST00000504431 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
UBE2B-204ENST00000504431 SH3BP5LQ7L8J4 393 aa12.08□□□□□ -0.48
UBE2B-204ENST00000504431 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
UBE2B-204ENST00000504431 FBXO45P0C2W1 286 aa12.07□□□□□ -0.48
UBE2B-204ENST00000504431 ZBTB33Q86T24 672 aa12.07□□□□□ -0.48
UBE2B-204ENST00000504431 KIF21BO75037 1637 aa12.06□□□□□ -0.48
UBE2B-204ENST00000504431 SLC19A1P41440 591 aa12.05□□□□□ -0.48
UBE2B-204ENST00000504431 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
UBE2B-204ENST00000504431 SH3BP2P78314 561 aa12.04□□□□□ -0.48
UBE2B-204ENST00000504431 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
UBE2B-204ENST00000504431 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
UBE2B-204ENST00000504431 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
UBE2B-204ENST00000504431 MAGEB6P1A0A0J9YX57 407 aa12.03□□□□□ -0.48
UBE2B-204ENST00000504431 SEMA3FQ13275 785 aa12.03□□□□□ -0.48
UBE2B-204ENST00000504431 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.49
UBE2B-204ENST00000504431 LIAT1Q6ZQX7 453 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 ADAM32Q8TC27 787 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.49
UBE2B-204ENST00000504431 CARD14Q9BXL6 1004 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 V9GY48 417 aaPredicted RBP12.02□□□□□ -0.49
UBE2B-204ENST00000504431 PTPRGP23470 1445 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 GOLGA3Q08378 1498 aa12.02□□□□□ -0.49
UBE2B-204ENST00000504431 POM121CA8CG34 1229 aa12.01□□□□□ -0.49
UBE2B-204ENST00000504431 FOXJ1Q92949 421 aa12.01□□□□□ -0.49
UBE2B-204ENST00000504431 GLMNQ92990 594 aa12.01□□□□□ -0.49
UBE2B-204ENST00000504431 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
UBE2B-204ENST00000504431 KIAA0556O60303 1618 aa12□□□□□ -0.49
UBE2B-204ENST00000504431 FAM174AQ8TBP5 190 aa12□□□□□ -0.49
UBE2B-204ENST00000504431 SLC10A4Q96EP9 437 aa12□□□□□ -0.49
UBE2B-204ENST00000504431 TNIKQ9UKE5 1360 aa12□□□□□ -0.49
UBE2B-204ENST00000504431 ARID3CA6NKF2 412 aa11.99□□□□□ -0.49
UBE2B-204ENST00000504431 SPRYD7Q5W111 196 aa11.99□□□□□ -0.49
UBE2B-204ENST00000504431 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
UBE2B-204ENST00000504431 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
UBE2B-204ENST00000504431 CCDC97Q96F63 343 aaPredicted RBP11.99□□□□□ -0.49
UBE2B-204ENST00000504431 PCDHB9Q9Y5E1 797 aa11.99□□□□□ -0.49
UBE2B-204ENST00000504431 RGS20O76081 388 aa11.98□□□□□ -0.49
UBE2B-204ENST00000504431 TRMT44Q8IYL2 757 aaKnown RBP11.98□□□□□ -0.49
UBE2B-204ENST00000504431 OCSTAMPQ9BR26 566 aa11.98□□□□□ -0.49
UBE2B-204ENST00000504431 C1QTNF2Q9BXJ5 285 aa11.98□□□□□ -0.49
UBE2B-204ENST00000504431 PRKD2Q9BZL6 878 aa11.98□□□□□ -0.49
UBE2B-204ENST00000504431 SKOR1P84550 965 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 ERFEQ4G0M1 354 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 ZNF598Q86UK7 904 aaKnown RBP11.97□□□□□ -0.49
UBE2B-204ENST00000504431 ALG2Q9H553 416 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
UBE2B-204ENST00000504431 NBPF20Q3BBV1 942 aa11.96□□□□□ -0.49
UBE2B-204ENST00000504431 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
UBE2B-204ENST00000504431 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
UBE2B-204ENST00000504431 WNT7AO00755 349 aa11.95□□□□□ -0.5
UBE2B-204ENST00000504431 C4orf48Q5BLP8 95 aa11.95□□□□□ -0.5
UBE2B-204ENST00000504431 ZNF697Q5TEC3 545 aa11.95□□□□□ -0.5
UBE2B-204ENST00000504431 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
UBE2B-204ENST00000504431 PLB1Q6P1J6 1458 aa11.94□□□□□ -0.5
UBE2B-204ENST00000504431 SAMD9Q5K651 1589 aa11.93□□□□□ -0.5
UBE2B-204ENST00000504431 MAP4K5Q9Y4K4 846 aa11.93□□□□□ -0.5
UBE2B-204ENST00000504431 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
UBE2B-204ENST00000504431 UACAQ9BZF9 1416 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms