RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ABCC6O95255 1503 aa25.15■■□□□ 1.62
PDLIM7-209ENST00000503346 CGNL1Q0VF96 1302 aa25.14■■□□□ 1.62
PDLIM7-209ENST00000503346 COL18A1P39060 1754 aa25.14■■□□□ 1.62
PDLIM7-209ENST00000503346 SPATA31A1Q5TZJ5 1347 aa25.13■■□□□ 1.61
PDLIM7-209ENST00000503346 LARP1Q6PKG0 1096 aaKnown RBP25.13■■□□□ 1.61
PDLIM7-209ENST00000503346 CCDC7Q96M83 1385 aa25.13■■□□□ 1.61
PDLIM7-209ENST00000503346 WASHC2AQ641Q2 1341 aa25.12■■□□□ 1.61
PDLIM7-209ENST00000503346 FAM98CQ17RN3 349 aaKnown RBP25.09■■□□□ 1.61
PDLIM7-209ENST00000503346 SEPT12Q8IYM1 358 aa25.09■■□□□ 1.61
PDLIM7-209ENST00000503346 WDR17Q8IZU2 1322 aa25.09■■□□□ 1.61
PDLIM7-209ENST00000503346 KIF20BQ96Q89 1820 aa25.08■■□□□ 1.61
PDLIM7-209ENST00000503346 CRB1P82279 1406 aa25.08■■□□□ 1.61
PDLIM7-209ENST00000503346 MAP3K19Q56UN5 1328 aa25.08■■□□□ 1.6
PDLIM7-209ENST00000503346 FBLN1P23142 703 aa25.07■■□□□ 1.6
PDLIM7-209ENST00000503346 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
PDLIM7-209ENST00000503346 BARGINQ6ZT62 677 aa25.06■■□□□ 1.6
PDLIM7-209ENST00000503346 IP6K1Q92551 441 aa25.06■■□□□ 1.6
PDLIM7-209ENST00000503346 THRAP3Q9Y2W1 955 aaKnown RBP25.06■■□□□ 1.6
PDLIM7-209ENST00000503346 TCP11L2Q8N4U5 519 aa25.05■■□□□ 1.6
PDLIM7-209ENST00000503346 USP35Q9P2H5 1018 aa25.05■■□□□ 1.6
PDLIM7-209ENST00000503346 NSD2O96028 1365 aa25.05■■□□□ 1.6
PDLIM7-209ENST00000503346 BLMP54132 1417 aaPredicted RBP25.04■■□□□ 1.6
PDLIM7-209ENST00000503346 TOM1L2Q6ZVM7 507 aa25.04■■□□□ 1.6
PDLIM7-209ENST00000503346 ERBB3P21860 1342 aa25.04■■□□□ 1.6
PDLIM7-209ENST00000503346 KNSTRNQ9Y448 316 aa25.03■■□□□ 1.6
PDLIM7-209ENST00000503346 RTL1A6NKG5 1358 aa25.03■■□□□ 1.6
PDLIM7-209ENST00000503346 LTN1O94822 1766 aa25.03■■□□□ 1.6
PDLIM7-209ENST00000503346 CSB-PGBD3P0DP91 1061 aa25.02■■□□□ 1.6
PDLIM7-209ENST00000503346 HOXC9P31274 260 aa25.02■■□□□ 1.6
PDLIM7-209ENST00000503346 RRS1Q15050 365 aaKnown RBP25.02■■□□□ 1.6
PDLIM7-209ENST00000503346 A0A0G2JS52 829 aa25.01■■□□□ 1.59
PDLIM7-209ENST00000503346 AMPHP49418 695 aa25.01■■□□□ 1.59
PDLIM7-209ENST00000503346 MYT1Q01538 1121 aa25.01■■□□□ 1.59
PDLIM7-209ENST00000503346 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
PDLIM7-209ENST00000503346 THSD7AQ9UPZ6 1657 aa25.01■■□□□ 1.59
PDLIM7-209ENST00000503346 PER1O15534 1290 aaPredicted RBP25■■□□□ 1.59
PDLIM7-209ENST00000503346 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
PDLIM7-209ENST00000503346 KIF24Q5T7B8 1368 aa25■■□□□ 1.59
PDLIM7-209ENST00000503346 AMER1Q5JTC6 1135 aaPredicted RBP24.99■■□□□ 1.59
PDLIM7-209ENST00000503346 KRT27Q7Z3Y8 459 aa24.98■■□□□ 1.59
PDLIM7-209ENST00000503346 UPF1Q92900 1129 aaKnown RBP eCLIP24.97■■□□□ 1.59
PDLIM7-209ENST00000503346 RGPD5Q99666 1765 aa24.97■■□□□ 1.59
PDLIM7-209ENST00000503346 FLT4P35916 1363 aa24.95■■□□□ 1.59
PDLIM7-209ENST00000503346 NLRP2Q9NX02 1062 aa24.94■■□□□ 1.58
PDLIM7-209ENST00000503346 EMILIN1Q9Y6C2 1016 aa24.94■■□□□ 1.58
PDLIM7-209ENST00000503346 ANKRD26Q9UPS8 1709 aa24.94■■□□□ 1.58
PDLIM7-209ENST00000503346 INSRP06213 1382 aa24.93■■□□□ 1.58
PDLIM7-209ENST00000503346 MORC1Q86VD1 984 aa24.93■■□□□ 1.58
PDLIM7-209ENST00000503346 CDCA7Q9BWT1 371 aaPredicted RBP24.93■■□□□ 1.58
PDLIM7-209ENST00000503346 LTV1Q96GA3 475 aaPredicted RBP24.92■■□□□ 1.58
PDLIM7-209ENST00000503346 POLKQ9UBT6 870 aa24.92■■□□□ 1.58
PDLIM7-209ENST00000503346 DISP2A7MBM2 1401 aa24.92■■□□□ 1.58
PDLIM7-209ENST00000503346 BRWD3Q6RI45 1802 aa24.91■■□□□ 1.58
PDLIM7-209ENST00000503346 HSP90AB2PQ58FF8 381 aa24.91■■□□□ 1.58
PDLIM7-209ENST00000503346 NPC1L1Q9UHC9 1359 aa24.91■■□□□ 1.58
PDLIM7-209ENST00000503346 PEAK1Q9H792 1746 aa24.9■■□□□ 1.58
PDLIM7-209ENST00000503346 TNNT2P45379 298 aaPredicted RBP24.9■■□□□ 1.58
PDLIM7-209ENST00000503346 SMG6Q86US8 1419 aaKnown RBP24.87■■□□□ 1.57
PDLIM7-209ENST00000503346 PARP4Q9UKK3 1724 aaKnown RBP24.87■■□□□ 1.57
PDLIM7-209ENST00000503346 PPM1GO15355 546 aaPredicted RBP24.87■■□□□ 1.57
PDLIM7-209ENST00000503346 PDE3BQ13370 1112 aa24.87■■□□□ 1.57
PDLIM7-209ENST00000503346 FAM208AQ9UK61 1670 aaKnown RBP24.86■■□□□ 1.57
PDLIM7-209ENST00000503346 DDB1Q16531 1140 aa24.85■■□□□ 1.57
PDLIM7-209ENST00000503346 EP400Q96L91 3159 aa24.84■■□□□ 1.57
PDLIM7-209ENST00000503346 IL2RBP14784 551 aa24.84■■□□□ 1.57
PDLIM7-209ENST00000503346 CC2D1BQ5T0F9 858 aaKnown RBP24.84■■□□□ 1.57
PDLIM7-209ENST00000503346 CCDC125Q86Z20 511 aa24.84■■□□□ 1.57
PDLIM7-209ENST00000503346 FAM182BQ5T319 152 aa24.83■■□□□ 1.57
PDLIM7-209ENST00000503346 NBPF6Q5VWK0 638 aa24.83■■□□□ 1.57
PDLIM7-209ENST00000503346 NBPF4Q96M43 638 aa24.83■■□□□ 1.57
PDLIM7-209ENST00000503346 LRRC37A3O60309 1634 aa24.83■■□□□ 1.56
PDLIM7-209ENST00000503346 WNK3Q9BYP7 1800 aa24.82■■□□□ 1.56
PDLIM7-209ENST00000503346 FAM196AQ6ZSG2 479 aa24.81■■□□□ 1.56
PDLIM7-209ENST00000503346 MAP2P11137 1827 aaKnown RBP24.8■■□□□ 1.56
PDLIM7-209ENST00000503346 EXOC5O00471 708 aa24.8■■□□□ 1.56
PDLIM7-209ENST00000503346 TNS2Q63HR2 1409 aa24.79■■□□□ 1.56
PDLIM7-209ENST00000503346 EIF4A2Q14240 407 aaKnown RBP24.77■■□□□ 1.56
PDLIM7-209ENST00000503346 OVOS2A0A0G2JMS6 1433 aa24.77■■□□□ 1.56
PDLIM7-209ENST00000503346 NCAPD2Q15021 1401 aa24.77■■□□□ 1.56
PDLIM7-209ENST00000503346 USHBP1Q8N6Y0 703 aa24.76■■□□□ 1.55
PDLIM7-209ENST00000503346 MARCH10Q8NA82 808 aaPredicted RBP24.76■■□□□ 1.55
PDLIM7-209ENST00000503346 BCL9O00512 1426 aa24.75■■□□□ 1.55
PDLIM7-209ENST00000503346 EYA1Q99502 592 aa24.74■■□□□ 1.55
PDLIM7-209ENST00000503346 MEGF6O75095 1541 aa24.74■■□□□ 1.55
PDLIM7-209ENST00000503346 MTHFSP49914 203 aa24.73■■□□□ 1.55
PDLIM7-209ENST00000503346 RGPD2P0DJD1 1756 aa24.72■■□□□ 1.55
PDLIM7-209ENST00000503346 SF3B2Q13435 895 aaKnown RBP24.72■■□□□ 1.55
PDLIM7-209ENST00000503346 CNGB1Q14028 1251 aaPredicted RBP24.72■■□□□ 1.55
PDLIM7-209ENST00000503346 RAPGEF4Q8WZA2 1011 aa24.72■■□□□ 1.55
PDLIM7-209ENST00000503346 IGSF1Q8N6C5 1336 aa24.69■■□□□ 1.54
PDLIM7-209ENST00000503346 TRIM37O94972 964 aa24.69■■□□□ 1.54
PDLIM7-209ENST00000503346 TATP17735 454 aaPredicted RBP24.69■■□□□ 1.54
PDLIM7-209ENST00000503346 DDX10Q13206 875 aaKnown RBP24.68■■□□□ 1.54
PDLIM7-209ENST00000503346 ZCRB1Q8TBF4 217 aaKnown RBP24.68■■□□□ 1.54
PDLIM7-209ENST00000503346 IL13P35225 146 aa24.67■■□□□ 1.54
PDLIM7-209ENST00000503346 DEFB132Q7Z7B7 95 aa24.66■■□□□ 1.54
PDLIM7-209ENST00000503346 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
PDLIM7-209ENST00000503346 BAG6P46379 1132 aa24.65■■□□□ 1.54
PDLIM7-209ENST00000503346 DDX54Q8TDD1 881 aaKnown RBP24.64■■□□□ 1.54
PDLIM7-209ENST00000503346 PLEKHG2Q9H7P9 1386 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms