RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
CXCL1P1-201ENST00000502804 COL18A1P39060 1754 aa23.29■■□□□ 1.32
CXCL1P1-201ENST00000502804 RGS12O14924 1447 aa23.29■■□□□ 1.32
CXCL1P1-201ENST00000502804 KNSTRNQ9Y448 316 aa23.29■■□□□ 1.32
CXCL1P1-201ENST00000502804 COL5A2P05997 1499 aaPredicted RBP23.29■■□□□ 1.32
CXCL1P1-201ENST00000502804 ABCC6O95255 1503 aa23.28■■□□□ 1.32
CXCL1P1-201ENST00000502804 FBLN1P23142 703 aa23.27■■□□□ 1.32
CXCL1P1-201ENST00000502804 LARP1Q6PKG0 1096 aaKnown RBP23.27■■□□□ 1.32
CXCL1P1-201ENST00000502804 LTN1O94822 1766 aa23.26■■□□□ 1.31
CXCL1P1-201ENST00000502804 SPATA31A1Q5TZJ5 1347 aa23.26■■□□□ 1.31
CXCL1P1-201ENST00000502804 MAP3K19Q56UN5 1328 aa23.25■■□□□ 1.31
CXCL1P1-201ENST00000502804 NSD2O96028 1365 aa23.25■■□□□ 1.31
CXCL1P1-201ENST00000502804 SOCS7O14512 581 aa23.24■■□□□ 1.31
CXCL1P1-201ENST00000502804 ONECUT3O60422 494 aaPredicted RBP23.24■■□□□ 1.31
CXCL1P1-201ENST00000502804 USP35Q9P2H5 1018 aa23.24■■□□□ 1.31
CXCL1P1-201ENST00000502804 CSB-PGBD3P0DP91 1061 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 AMPHP49418 695 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 FAM98CQ17RN3 349 aaKnown RBP23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 TOM1L2Q6ZVM7 507 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 IP6K1Q92551 441 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 WDR17Q8IZU2 1322 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 CRB1P82279 1406 aa23.23■■□□□ 1.31
CXCL1P1-201ENST00000502804 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
CXCL1P1-201ENST00000502804 A0A0G2JS52 829 aa23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 PER1O15534 1290 aaPredicted RBP23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 MYT1Q01538 1121 aa23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 SEPT12Q8IYM1 358 aa23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 BLMP54132 1417 aaPredicted RBP23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 RGPD5Q99666 1765 aa23.21■■□□□ 1.31
CXCL1P1-201ENST00000502804 HOXC9P31274 260 aa23.2■■□□□ 1.3
CXCL1P1-201ENST00000502804 TCP11L2Q8N4U5 519 aa23.2■■□□□ 1.3
CXCL1P1-201ENST00000502804 THRAP3Q9Y2W1 955 aaKnown RBP23.2■■□□□ 1.3
CXCL1P1-201ENST00000502804 ANKRD26Q9UPS8 1709 aa23.19■■□□□ 1.3
CXCL1P1-201ENST00000502804 RTL1A6NKG5 1358 aa23.19■■□□□ 1.3
CXCL1P1-201ENST00000502804 ERBB3P21860 1342 aa23.19■■□□□ 1.3
CXCL1P1-201ENST00000502804 AMER1Q5JTC6 1135 aaPredicted RBP23.18■■□□□ 1.3
CXCL1P1-201ENST00000502804 BARGINQ6ZT62 677 aa23.18■■□□□ 1.3
CXCL1P1-201ENST00000502804 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
CXCL1P1-201ENST00000502804 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
CXCL1P1-201ENST00000502804 TNNT2P45379 298 aaPredicted RBP23.17■■□□□ 1.3
CXCL1P1-201ENST00000502804 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
CXCL1P1-201ENST00000502804 CARD10Q9BWT7 1032 aa23.16■■□□□ 1.3
CXCL1P1-201ENST00000502804 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
CXCL1P1-201ENST00000502804 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
CXCL1P1-201ENST00000502804 FLT4P35916 1363 aa23.14■■□□□ 1.3
CXCL1P1-201ENST00000502804 NLRP2Q9NX02 1062 aa23.14■■□□□ 1.29
CXCL1P1-201ENST00000502804 THSD7AQ9UPZ6 1657 aa23.13■■□□□ 1.29
CXCL1P1-201ENST00000502804 PPM1GO15355 546 aaPredicted RBP23.13■■□□□ 1.29
CXCL1P1-201ENST00000502804 HSP90AB2PQ58FF8 381 aa23.12■■□□□ 1.29
CXCL1P1-201ENST00000502804 CC2D1BQ5T0F9 858 aaKnown RBP23.12■■□□□ 1.29
CXCL1P1-201ENST00000502804 KRT27Q7Z3Y8 459 aa23.12■■□□□ 1.29
CXCL1P1-201ENST00000502804 POLKQ9UBT6 870 aa23.12■■□□□ 1.29
CXCL1P1-201ENST00000502804 INSRP06213 1382 aa23.12■■□□□ 1.29
CXCL1P1-201ENST00000502804 NPC1L1Q9UHC9 1359 aa23.11■■□□□ 1.29
CXCL1P1-201ENST00000502804 PEAK1Q9H792 1746 aa23.11■■□□□ 1.29
CXCL1P1-201ENST00000502804 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
CXCL1P1-201ENST00000502804 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
CXCL1P1-201ENST00000502804 CDCA7Q9BWT1 371 aaPredicted RBP23.09■■□□□ 1.29
CXCL1P1-201ENST00000502804 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
CXCL1P1-201ENST00000502804 FAM208AQ9UK61 1670 aaKnown RBP23.07■■□□□ 1.28
CXCL1P1-201ENST00000502804 CNGB1Q14028 1251 aaPredicted RBP23.07■■□□□ 1.28
CXCL1P1-201ENST00000502804 PDE3BQ13370 1112 aa23.06■■□□□ 1.28
CXCL1P1-201ENST00000502804 DDB1Q16531 1140 aa23.04■■□□□ 1.28
CXCL1P1-201ENST00000502804 UPF1Q92900 1129 aaKnown RBP eCLIP23.04■■□□□ 1.28
CXCL1P1-201ENST00000502804 DISP2A7MBM2 1401 aa23.04■■□□□ 1.28
CXCL1P1-201ENST00000502804 PARP4Q9UKK3 1724 aaKnown RBP23.04■■□□□ 1.28
CXCL1P1-201ENST00000502804 IL2RBP14784 551 aa23.03■■□□□ 1.28
CXCL1P1-201ENST00000502804 WNK3Q9BYP7 1800 aa23.03■■□□□ 1.28
CXCL1P1-201ENST00000502804 NBPF6Q5VWK0 638 aa23.02■■□□□ 1.28
CXCL1P1-201ENST00000502804 NBPF4Q96M43 638 aa23.02■■□□□ 1.28
CXCL1P1-201ENST00000502804 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
CXCL1P1-201ENST00000502804 EXOC5O00471 708 aa23■■□□□ 1.27
CXCL1P1-201ENST00000502804 FAM182BQ5T319 152 aa23■■□□□ 1.27
CXCL1P1-201ENST00000502804 LRRC37A3O60309 1634 aa22.99■■□□□ 1.27
CXCL1P1-201ENST00000502804 RGPD2P0DJD1 1756 aa22.99■■□□□ 1.27
CXCL1P1-201ENST00000502804 MTHFSP49914 203 aa22.98■■□□□ 1.27
CXCL1P1-201ENST00000502804 EIF4A2Q14240 407 aaKnown RBP22.98■■□□□ 1.27
CXCL1P1-201ENST00000502804 USHBP1Q8N6Y0 703 aa22.98■■□□□ 1.27
CXCL1P1-201ENST00000502804 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
CXCL1P1-201ENST00000502804 CCDC125Q86Z20 511 aa22.96■■□□□ 1.27
CXCL1P1-201ENST00000502804 TNS2Q63HR2 1409 aa22.95■■□□□ 1.26
CXCL1P1-201ENST00000502804 EYA1Q99502 592 aa22.95■■□□□ 1.26
CXCL1P1-201ENST00000502804 ZNF316A6NFI3 1004 aaPredicted RBP22.94■■□□□ 1.26
CXCL1P1-201ENST00000502804 RAPGEF4Q8WZA2 1011 aa22.94■■□□□ 1.26
CXCL1P1-201ENST00000502804 MARCH10Q8NA82 808 aaPredicted RBP22.93■■□□□ 1.26
CXCL1P1-201ENST00000502804 OVOS2A0A0G2JMS6 1433 aa22.92■■□□□ 1.26
CXCL1P1-201ENST00000502804 TATP17735 454 aaPredicted RBP22.92■■□□□ 1.26
CXCL1P1-201ENST00000502804 MEGF6O75095 1541 aa22.92■■□□□ 1.26
CXCL1P1-201ENST00000502804 SF3B2Q13435 895 aaKnown RBP22.91■■□□□ 1.26
CXCL1P1-201ENST00000502804 NCAPD2Q15021 1401 aa22.91■■□□□ 1.26
CXCL1P1-201ENST00000502804 IGSF1Q8N6C5 1336 aa22.89■■□□□ 1.26
CXCL1P1-201ENST00000502804 ZCRB1Q8TBF4 217 aaKnown RBP22.89■■□□□ 1.25
CXCL1P1-201ENST00000502804 PPP2R1AP30153 589 aa22.88■■□□□ 1.25
CXCL1P1-201ENST00000502804 IL13P35225 146 aa22.88■■□□□ 1.25
CXCL1P1-201ENST00000502804 DIAPH1O60610 1272 aaKnown RBP22.87■■□□□ 1.25
CXCL1P1-201ENST00000502804 TRIM37O94972 964 aa22.87■■□□□ 1.25
CXCL1P1-201ENST00000502804 DDX54Q8TDD1 881 aaKnown RBP22.87■■□□□ 1.25
CXCL1P1-201ENST00000502804 PARD3Q8TEW0 1356 aa22.87■■□□□ 1.25
CXCL1P1-201ENST00000502804 BCL9O00512 1426 aa22.85■■□□□ 1.25
CXCL1P1-201ENST00000502804 CFAP53Q96M91 514 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms