RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 UPP2O95045 317 aa10.77□□□□□ -0.69
CCSER1-202ENST00000502478 ARHGAP9Q9BRR9 750 aa10.77□□□□□ -0.69
CCSER1-202ENST00000502478 BMP2P12643 396 aa10.76□□□□□ -0.69
CCSER1-202ENST00000502478 NR6A1Q15406 480 aa10.76□□□□□ -0.69
CCSER1-202ENST00000502478 MAN1A2O60476 641 aa10.75□□□□□ -0.69
CCSER1-202ENST00000502478 VSIG8P0DPA2 414 aa10.74□□□□□ -0.69
CCSER1-202ENST00000502478 LORP23490 312 aaPredicted RBP10.74□□□□□ -0.69
CCSER1-202ENST00000502478 CDV3Q9UKY7 258 aaKnown RBP10.74□□□□□ -0.69
CCSER1-202ENST00000502478 SLC10A4Q96EP9 437 aa10.73□□□□□ -0.69
CCSER1-202ENST00000502478 TSEN34Q9BSV6 310 aaKnown RBP10.73□□□□□ -0.69
CCSER1-202ENST00000502478 SOS2Q07890 1332 aaPredicted RBP10.73□□□□□ -0.69
CCSER1-202ENST00000502478 AP1G2O75843 785 aa10.72□□□□□ -0.69
CCSER1-202ENST00000502478 PPP1R26Q5T8A7 1209 aaPredicted RBP10.72□□□□□ -0.69
CCSER1-202ENST00000502478 OCSTAMPQ9BR26 566 aa10.72□□□□□ -0.69
CCSER1-202ENST00000502478 ZBTB33Q86T24 672 aa10.71□□□□□ -0.69
CCSER1-202ENST00000502478 KCTD15Q96SI1 283 aaPredicted RBP10.71□□□□□ -0.69
CCSER1-202ENST00000502478 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.69
CCSER1-202ENST00000502478 DNMT3LQ9UJW3 386 aa10.71□□□□□ -0.69
CCSER1-202ENST00000502478 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
CCSER1-202ENST00000502478 GPSM3Q9Y4H4 160 aa10.71□□□□□ -0.69
CCSER1-202ENST00000502478 PTK2Q05397 1052 aa10.7□□□□□ -0.7
CCSER1-202ENST00000502478 Q6ZVU0 165 aa10.7□□□□□ -0.7
CCSER1-202ENST00000502478 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
CCSER1-202ENST00000502478 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
CCSER1-202ENST00000502478 USP17L8P0C7I0 530 aa10.68□□□□□ -0.7
CCSER1-202ENST00000502478 FAM181BA6NEQ2 426 aa10.67□□□□□ -0.7
CCSER1-202ENST00000502478 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
CCSER1-202ENST00000502478 DHX9Q08211 1270 aaKnown RBP10.67□□□□□ -0.7
CCSER1-202ENST00000502478 CBLBQ13191 982 aa10.67□□□□□ -0.7
CCSER1-202ENST00000502478 INTS6LQ5JSJ4 861 aaKnown RBP10.67□□□□□ -0.7
CCSER1-202ENST00000502478 EPS8L1Q8TE68 723 aa10.67□□□□□ -0.7
CCSER1-202ENST00000502478 RFC5P40937 340 aa10.66□□□□□ -0.7
CCSER1-202ENST00000502478 PNMA1Q8ND90 353 aa10.66□□□□□ -0.7
CCSER1-202ENST00000502478 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
CCSER1-202ENST00000502478 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
CCSER1-202ENST00000502478 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.65□□□□□ -0.7
CCSER1-202ENST00000502478 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
CCSER1-202ENST00000502478 SPINT1O43278 529 aa10.64□□□□□ -0.71
CCSER1-202ENST00000502478 NBPF20Q3BBV1 942 aa10.63□□□□□ -0.71
CCSER1-202ENST00000502478 PTSQ03393 145 aa10.6□□□□□ -0.71
CCSER1-202ENST00000502478 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
CCSER1-202ENST00000502478 PCMTD1Q96MG8 357 aaPredicted RBP10.59□□□□□ -0.71
CCSER1-202ENST00000502478 AGBL1Q96MI9 1066 aa10.59□□□□□ -0.71
CCSER1-202ENST00000502478 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
CCSER1-202ENST00000502478 SLC24A1O60721 1099 aa10.58□□□□□ -0.72
CCSER1-202ENST00000502478 DZIP3Q86Y13 1208 aaKnown RBP10.58□□□□□ -0.72
CCSER1-202ENST00000502478 ESPNB1AK53 854 aa10.57□□□□□ -0.72
CCSER1-202ENST00000502478 RELBQ01201 579 aa10.57□□□□□ -0.72
CCSER1-202ENST00000502478 TMEM259Q4ZIN3 620 aa10.57□□□□□ -0.72
CCSER1-202ENST00000502478 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
CCSER1-202ENST00000502478 TMPRSS4Q9NRS4 437 aa10.57□□□□□ -0.72
CCSER1-202ENST00000502478 CTSOP43234 321 aaPredicted RBP10.56□□□□□ -0.72
CCSER1-202ENST00000502478 ERVH48-1M5A8F1 160 aa10.55□□□□□ -0.72
CCSER1-202ENST00000502478 LILRA1O75019 489 aa10.55□□□□□ -0.72
CCSER1-202ENST00000502478 CCDC155Q8N6L0 562 aa10.55□□□□□ -0.72
CCSER1-202ENST00000502478 INSM2Q96T92 566 aaPredicted RBP10.55□□□□□ -0.72
CCSER1-202ENST00000502478 ADH1AP07327 375 aa10.54□□□□□ -0.72
CCSER1-202ENST00000502478 RAB15P59190 212 aa10.54□□□□□ -0.72
CCSER1-202ENST00000502478 NEUROD2Q15784 382 aa10.54□□□□□ -0.72
CCSER1-202ENST00000502478 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
CCSER1-202ENST00000502478 SLC35F4A4IF30 521 aa10.53□□□□□ -0.72
CCSER1-202ENST00000502478 SEPT12Q8IYM1 358 aa10.53□□□□□ -0.72
CCSER1-202ENST00000502478 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
CCSER1-202ENST00000502478 KRT76Q01546 638 aa10.52□□□□□ -0.73
CCSER1-202ENST00000502478 RNF217Q8TC41 542 aa10.52□□□□□ -0.73
CCSER1-202ENST00000502478 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
CCSER1-202ENST00000502478 ZNF395Q9H8N7 513 aaPredicted RBP10.52□□□□□ -0.73
CCSER1-202ENST00000502478 POLMQ9NP87 494 aaPredicted RBP10.52□□□□□ -0.73
CCSER1-202ENST00000502478 ZBBXA8MT70 800 aa10.51□□□□□ -0.73
CCSER1-202ENST00000502478 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
CCSER1-202ENST00000502478 KDF1Q8NAX2 398 aaPredicted RBP10.51□□□□□ -0.73
CCSER1-202ENST00000502478 IL27Q8NEV9 243 aa10.51□□□□□ -0.73
CCSER1-202ENST00000502478 PTGIRP43119 386 aa10.49□□□□□ -0.73
CCSER1-202ENST00000502478 FOXD4L5Q5VV16 416 aaPredicted RBP10.49□□□□□ -0.73
CCSER1-202ENST00000502478 FBXO45P0C2W1 286 aa10.48□□□□□ -0.73
CCSER1-202ENST00000502478 ITGA6P23229 1130 aa10.48□□□□□ -0.73
CCSER1-202ENST00000502478 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
CCSER1-202ENST00000502478 CNTNAP3BQ96NU0 1288 aa10.47□□□□□ -0.73
CCSER1-202ENST00000502478 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
CCSER1-202ENST00000502478 CNTNAP3Q9BZ76 1288 aa10.47□□□□□ -0.73
CCSER1-202ENST00000502478 CYLDQ9NQC7 956 aa10.47□□□□□ -0.73
CCSER1-202ENST00000502478 SENP3-EIF4A1A0A087X0R7 540 aa10.46□□□□□ -0.73
CCSER1-202ENST00000502478 PCDHB9Q9Y5E1 797 aa10.46□□□□□ -0.73
CCSER1-202ENST00000502478 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-202ENST00000502478 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
CCSER1-202ENST00000502478 SOCS7O14512 581 aa10.44□□□□□ -0.74
CCSER1-202ENST00000502478 RNFT1Q5M7Z0 435 aa10.44□□□□□ -0.74
CCSER1-202ENST00000502478 CCDC125Q86Z20 511 aa10.44□□□□□ -0.74
CCSER1-202ENST00000502478 VWA5B2Q8N398 1253 aa10.43□□□□□ -0.74
CCSER1-202ENST00000502478 BANK1Q8NDB2 785 aa10.43□□□□□ -0.74
CCSER1-202ENST00000502478 CDC14CA4D256 554 aa10.42□□□□□ -0.74
CCSER1-202ENST00000502478 SV2AQ7L0J3 742 aa10.42□□□□□ -0.74
CCSER1-202ENST00000502478 LYSMD3Q7Z3D4 306 aa10.42□□□□□ -0.74
CCSER1-202ENST00000502478 ATP5J2-PTCD1G3V325 749 aa10.41□□□□□ -0.74
CCSER1-202ENST00000502478 GPR37L1O60883 481 aa10.41□□□□□ -0.74
CCSER1-202ENST00000502478 RNF144AP50876 292 aaPredicted RBP10.41□□□□□ -0.74
CCSER1-202ENST00000502478 NR1H3Q13133 447 aa10.41□□□□□ -0.74
CCSER1-202ENST00000502478 MCCD1P59942 119 aaPredicted RBP10.4□□□□□ -0.74
CCSER1-202ENST00000502478 ERVK-9P63128 1117 aa10.4□□□□□ -0.74
CCSER1-202ENST00000502478 MTMR14Q8NCE2 650 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms