RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
CCSER1-202ENST00000502478 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
CCSER1-202ENST00000502478 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
CCSER1-202ENST00000502478 PHF23Q9BUL5 403 aaPredicted RBP26.16■■□□□ 1.78
CCSER1-202ENST00000502478 FOXD1Q16676 465 aa24.67■■□□□ 1.54
CCSER1-202ENST00000502478 PLPPR3Q6T4P5 718 aa23.79■■□□□ 1.4
CCSER1-202ENST00000502478 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
CCSER1-202ENST00000502478 ADRA2BP18089 450 aa23.1■■□□□ 1.29
CCSER1-202ENST00000502478 PIAS4Q8N2W9 510 aaPredicted RBP23.08■■□□□ 1.29
CCSER1-202ENST00000502478 MSH5O43196 834 aa23.04■■□□□ 1.28
CCSER1-202ENST00000502478 POTEDQ86YR6 584 aa22.2■■□□□ 1.14
CCSER1-202ENST00000502478 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
CCSER1-202ENST00000502478 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
CCSER1-202ENST00000502478 DMRT2Q9Y5R5 561 aa21.05■□□□□ 0.96
CCSER1-202ENST00000502478 PPP4R3CPQ6ZMV5 832 aa20.86■□□□□ 0.93
CCSER1-202ENST00000502478 CNKSR2Q8WXI2 1034 aa20.45■□□□□ 0.86
CCSER1-202ENST00000502478 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
CCSER1-202ENST00000502478 RNF216Q9NWF9 866 aaPredicted RBP20.23■□□□□ 0.83
CCSER1-202ENST00000502478 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
CCSER1-202ENST00000502478 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
CCSER1-202ENST00000502478 NPM3O75607 178 aaKnown RBP19.83■□□□□ 0.77
CCSER1-202ENST00000502478 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
CCSER1-202ENST00000502478 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
CCSER1-202ENST00000502478 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
CCSER1-202ENST00000502478 KCNA4P22459 653 aa19.58■□□□□ 0.72
CCSER1-202ENST00000502478 C1QBPQ07021 282 aaKnown RBP19.39■□□□□ 0.69
CCSER1-202ENST00000502478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.34■□□□□ 0.69
CCSER1-202ENST00000502478 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
CCSER1-202ENST00000502478 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
CCSER1-202ENST00000502478 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
CCSER1-202ENST00000502478 CAPN15O75808 1086 aa18.58■□□□□ 0.56
CCSER1-202ENST00000502478 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
CCSER1-202ENST00000502478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
CCSER1-202ENST00000502478 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
CCSER1-202ENST00000502478 DSG3P32926 999 aa18.47■□□□□ 0.55
CCSER1-202ENST00000502478 APLP2Q06481 763 aa18.47■□□□□ 0.55
CCSER1-202ENST00000502478 SAMD1Q6SPF0 538 aaPredicted RBP18.4■□□□□ 0.54
CCSER1-202ENST00000502478 MYCNP04198 464 aaPredicted RBP18.35■□□□□ 0.53
CCSER1-202ENST00000502478 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
CCSER1-202ENST00000502478 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
CCSER1-202ENST00000502478 FOXD4L1Q9NU39 408 aa18.24■□□□□ 0.51
CCSER1-202ENST00000502478 ABCB7O75027 752 aa18.17■□□□□ 0.5
CCSER1-202ENST00000502478 ZBTB22O15209 634 aa18.02■□□□□ 0.48
CCSER1-202ENST00000502478 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
CCSER1-202ENST00000502478 POLA2Q14181 598 aa17.88■□□□□ 0.45
CCSER1-202ENST00000502478 ATXN8OSP0DMR3 200 aa17.68■□□□□ 0.42
CCSER1-202ENST00000502478 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
CCSER1-202ENST00000502478 ZBTB12Q9Y330 459 aaPredicted RBP17.57■□□□□ 0.4
CCSER1-202ENST00000502478 POTEHQ6S545 545 aa17.42■□□□□ 0.38
CCSER1-202ENST00000502478 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
CCSER1-202ENST00000502478 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
CCSER1-202ENST00000502478 AKT1S1Q96B36 256 aa17.25■□□□□ 0.35
CCSER1-202ENST00000502478 FBLN2P98095 1184 aa17.18■□□□□ 0.34
CCSER1-202ENST00000502478 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
CCSER1-202ENST00000502478 EHMT2Q96KQ7 1210 aa17.16■□□□□ 0.34
CCSER1-202ENST00000502478 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
CCSER1-202ENST00000502478 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
CCSER1-202ENST00000502478 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
CCSER1-202ENST00000502478 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
CCSER1-202ENST00000502478 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
CCSER1-202ENST00000502478 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
CCSER1-202ENST00000502478 SSUH2Q9Y2M2 353 aa16.84■□□□□ 0.29
CCSER1-202ENST00000502478 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
CCSER1-202ENST00000502478 PIP4P2Q8N4L2 257 aa16.79■□□□□ 0.28
CCSER1-202ENST00000502478 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCSER1-202ENST00000502478 SPDYE1Q8NFV5 336 aaPredicted RBP16.68■□□□□ 0.26
CCSER1-202ENST00000502478 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
CCSER1-202ENST00000502478 PABPN1Q86U42 306 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCSER1-202ENST00000502478 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.23
CCSER1-202ENST00000502478 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
CCSER1-202ENST00000502478 HAX1O00165 279 aa16.41■□□□□ 0.22
CCSER1-202ENST00000502478 PRR29P0C7W0 189 aa16.37■□□□□ 0.21
CCSER1-202ENST00000502478 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
CCSER1-202ENST00000502478 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
CCSER1-202ENST00000502478 EVX2Q03828 476 aa16.24■□□□□ 0.19
CCSER1-202ENST00000502478 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
CCSER1-202ENST00000502478 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
CCSER1-202ENST00000502478 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
CCSER1-202ENST00000502478 PROM2Q8N271 834 aa16.03■□□□□ 0.16
CCSER1-202ENST00000502478 CREBZFQ9NS37 354 aa16.03■□□□□ 0.16
CCSER1-202ENST00000502478 CD44P16070 742 aaKnown RBP15.95■□□□□ 0.14
CCSER1-202ENST00000502478 GABBR2O75899 941 aa15.89■□□□□ 0.13
CCSER1-202ENST00000502478 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
CCSER1-202ENST00000502478 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
CCSER1-202ENST00000502478 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCSER1-202ENST00000502478 CLCN6P51797 869 aa15.73■□□□□ 0.11
CCSER1-202ENST00000502478 ZRANB1Q9UGI0 708 aa15.73■□□□□ 0.11
CCSER1-202ENST00000502478 FKBP8Q14318 412 aa15.69■□□□□ 0.1
CCSER1-202ENST00000502478 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
CCSER1-202ENST00000502478 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
CCSER1-202ENST00000502478 MIER1Q8N108 512 aa15.55■□□□□ 0.08
CCSER1-202ENST00000502478 PLEKHG5O94827 1062 aa15.54■□□□□ 0.08
CCSER1-202ENST00000502478 PHF12Q96QT6 1004 aa15.54■□□□□ 0.08
CCSER1-202ENST00000502478 GALR2O43603 387 aaPredicted RBP15.5■□□□□ 0.07
CCSER1-202ENST00000502478 DCBLD2Q96PD2 775 aa15.48■□□□□ 0.07
CCSER1-202ENST00000502478 PLCD3Q8N3E9 789 aa15.46■□□□□ 0.07
CCSER1-202ENST00000502478 TSPYL2Q9H2G4 693 aaPredicted RBP15.43■□□□□ 0.06
CCSER1-202ENST00000502478 CCDC61Q9Y6R9 512 aa15.4■□□□□ 0.06
CCSER1-202ENST00000502478 LHX8Q68G74 356 aa15.38■□□□□ 0.05
CCSER1-202ENST00000502478 RASEFQ8IZ41 740 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms