RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 POLR3GLQ9BT43 218 aa9.64□□□□□ -0.87
MED28-202ENST00000499786 SCAF11Q99590 1463 aaKnown RBP9.64□□□□□ -0.87
MED28-202ENST00000499786 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 KIF7Q2M1P5 1343 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 KCNK17Q96T54 332 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 RBM27Q9P2N5 1060 aaKnown RBP9.63□□□□□ -0.87
MED28-202ENST00000499786 AXIN2Q9Y2T1 843 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 SETBP1Q9Y6X0 1596 aa9.63□□□□□ -0.87
MED28-202ENST00000499786 PRSS12P56730 875 aa9.62□□□□□ -0.87
MED28-202ENST00000499786 DMRTA1Q5VZB9 504 aa9.62□□□□□ -0.87
MED28-202ENST00000499786 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
MED28-202ENST00000499786 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
MED28-202ENST00000499786 FAM198AQ9UFP1 575 aa9.62□□□□□ -0.87
MED28-202ENST00000499786 NEXMIFQ5QGS0 1516 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 POTEMA6NI47 508 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 POTEGQ6S5H5 508 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 PIK3C2GO75747 1445 aa9.61□□□□□ -0.87
MED28-202ENST00000499786 FER1L4A9Z1Z3 1794 aa9.6□□□□□ -0.87
MED28-202ENST00000499786 TMEM131LA2VDJ0 1609 aa9.6□□□□□ -0.87
MED28-202ENST00000499786 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
MED28-202ENST00000499786 TMF1P82094 1093 aa9.6□□□□□ -0.87
MED28-202ENST00000499786 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
MED28-202ENST00000499786 MYO5BQ9ULV0 1848 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 NBPF1Q3BBV0 1214 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 CDCA8Q53HL2 280 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 PADI6Q6TGC4 694 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 TSKSQ9UJT2 592 aa9.59□□□□□ -0.87
MED28-202ENST00000499786 MINK1Q8N4C8 1332 aaPredicted RBP9.58□□□□□ -0.88
MED28-202ENST00000499786 MYO3AQ8NEV4 1616 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 CCER2I3L3R5 266 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 IRF6O14896 467 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 KRTAP3-3Q9BYR6 98 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 SLC24A3Q9HC58 644 aa9.58□□□□□ -0.88
MED28-202ENST00000499786 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
MED28-202ENST00000499786 ADGRF5Q8IZF2 1346 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 ZFYVE9O95405 1425 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 TRIM6-TRIM34B2RNG4 842 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 IDI1Q13907 227 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 PROX2Q3B8N5 592 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 TNRQ92752 1358 aa9.57□□□□□ -0.88
MED28-202ENST00000499786 ZMYM3Q14202 1370 aa9.56□□□□□ -0.88
MED28-202ENST00000499786 C3orf80F5H4A9 247 aa9.56□□□□□ -0.88
MED28-202ENST00000499786 VPS9D1Q9Y2B5 631 aa9.56□□□□□ -0.88
MED28-202ENST00000499786 NLRP1Q9C000 1473 aa9.55□□□□□ -0.88
MED28-202ENST00000499786 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
MED28-202ENST00000499786 TK2O00142 265 aa9.55□□□□□ -0.88
MED28-202ENST00000499786 LSM11P83369 360 aaKnown RBP eCLIP9.55□□□□□ -0.88
MED28-202ENST00000499786 CFAP70Q5T0N1 1121 aa9.55□□□□□ -0.88
MED28-202ENST00000499786 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
MED28-202ENST00000499786 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
MED28-202ENST00000499786 QRICH2Q9H0J4 1663 aa9.55□□□□□ -0.88
MED28-202ENST00000499786 A2ML1A8K2U0 1454 aa9.54□□□□□ -0.88
MED28-202ENST00000499786 DISP3Q9P2K9 1392 aa9.54□□□□□ -0.88
MED28-202ENST00000499786 HDGFP51858 240 aaKnown RBP9.54□□□□□ -0.88
MED28-202ENST00000499786 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.54□□□□□ -0.88
MED28-202ENST00000499786 RIMS2Q9UQ26 1411 aa9.54□□□□□ -0.88
MED28-202ENST00000499786 ADGRB1O14514 1584 aa9.54□□□□□ -0.88
MED28-202ENST00000499786 CENPJQ9HC77 1338 aaPredicted RBP9.54□□□□□ -0.88
MED28-202ENST00000499786 KTN1Q86UP2 1357 aaKnown RBP9.53□□□□□ -0.88
MED28-202ENST00000499786 SBNO2Q9Y2G9 1366 aa9.53□□□□□ -0.88
MED28-202ENST00000499786 C3P01024 1663 aa9.53□□□□□ -0.88
MED28-202ENST00000499786 BHMG1C9JSJ3 638 aaPredicted RBP9.53□□□□□ -0.88
MED28-202ENST00000499786 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
MED28-202ENST00000499786 CCDC102AQ96A19 550 aa9.53□□□□□ -0.88
MED28-202ENST00000499786 AK7Q96M32 723 aa9.53□□□□□ -0.88
MED28-202ENST00000499786 EYA1Q99502 592 aa9.53□□□□□ -0.88
MED28-202ENST00000499786 C14orf93Q9H972 538 aaKnown RBP9.53□□□□□ -0.88
MED28-202ENST00000499786 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 ARHGEF28Q8N1W1 1705 aaKnown RBP9.52□□□□□ -0.89
MED28-202ENST00000499786 TESK2Q96S53 571 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 PHOX2BQ99453 314 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 KIAA1468Q9P260 1216 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 PCDH10Q9P2E7 1040 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 RABGEF1Q9UJ41 708 aa9.52□□□□□ -0.89
MED28-202ENST00000499786 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
MED28-202ENST00000499786 HRO43593 1189 aa9.51□□□□□ -0.89
MED28-202ENST00000499786 FAM161AQ3B820 660 aa9.51□□□□□ -0.89
MED28-202ENST00000499786 NUTM2DQ5VT03 806 aaPredicted RBP9.51□□□□□ -0.89
MED28-202ENST00000499786 ALKQ9UM73 1620 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 TRIM66O15016 1216 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 ADGRD1Q6QNK2 874 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 PACS2Q86VP3 889 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 TATDN2Q93075 761 aa9.5□□□□□ -0.89
MED28-202ENST00000499786 PRKRIP1Q9H875 184 aaPredicted RBP9.5□□□□□ -0.89
MED28-202ENST00000499786 RIMS1Q86UR5 1692 aaKnown RBP9.5□□□□□ -0.89
MED28-202ENST00000499786 OATP04181 439 aa9.49□□□□□ -0.89
MED28-202ENST00000499786 METTL3Q86U44 580 aaKnown RBP9.49□□□□□ -0.89
MED28-202ENST00000499786 TRAK1Q9UPV9 953 aa9.49□□□□□ -0.89
MED28-202ENST00000499786 MYOM1P52179 1685 aa9.48□□□□□ -0.89
MED28-202ENST00000499786 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
MED28-202ENST00000499786 RALBP1Q15311 655 aa9.48□□□□□ -0.89
MED28-202ENST00000499786 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
MED28-202ENST00000499786 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
MED28-202ENST00000499786 AMHR2Q16671 573 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms