RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
SNX13-212ENST00000498463 NBPF14Q5TI25 921 aa12.97□□□□□ -0.33
SNX13-212ENST00000498463 LARGE2Q8N3Y3 721 aa12.97□□□□□ -0.33
SNX13-212ENST00000498463 LRCH3Q96II8 777 aa12.97□□□□□ -0.33
SNX13-212ENST00000498463 EGFL7Q9UHF1 273 aa12.97□□□□□ -0.33
SNX13-212ENST00000498463 NOD1Q9Y239 953 aa12.97□□□□□ -0.33
SNX13-212ENST00000498463 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
SNX13-212ENST00000498463 SIX5Q8N196 739 aa12.96□□□□□ -0.33
SNX13-212ENST00000498463 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
SNX13-212ENST00000498463 KIAA1024Q9UPX6 916 aa12.96□□□□□ -0.33
SNX13-212ENST00000498463 DKK1O94907 266 aa12.95□□□□□ -0.34
SNX13-212ENST00000498463 ABL1P00519 1130 aa12.95□□□□□ -0.34
SNX13-212ENST00000498463 OCLNQ16625 522 aa12.95□□□□□ -0.34
SNX13-212ENST00000498463 TAS1R3Q7RTX0 852 aa12.95□□□□□ -0.34
SNX13-212ENST00000498463 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
SNX13-212ENST00000498463 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
SNX13-212ENST00000498463 BHMG1C9JSJ3 638 aaPredicted RBP12.94□□□□□ -0.34
SNX13-212ENST00000498463 H3BRB1 525 aa12.94□□□□□ -0.34
SNX13-212ENST00000498463 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
SNX13-212ENST00000498463 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
SNX13-212ENST00000498463 ZNF326Q5BKZ1 582 aaKnown RBP12.94□□□□□ -0.34
SNX13-212ENST00000498463 TUT1Q9H6E5 874 aaKnown RBP12.94□□□□□ -0.34
SNX13-212ENST00000498463 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.94□□□□□ -0.34
SNX13-212ENST00000498463 PBX2P40425 430 aa12.93□□□□□ -0.34
SNX13-212ENST00000498463 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
SNX13-212ENST00000498463 EVA1BQ9NVM1 165 aa12.93□□□□□ -0.34
SNX13-212ENST00000498463 PRIMPOLQ96LW4 560 aa12.92□□□□□ -0.34
SNX13-212ENST00000498463 DOLKQ9UPQ8 538 aa12.92□□□□□ -0.34
SNX13-212ENST00000498463 NR1I2O75469 434 aa12.91□□□□□ -0.34
SNX13-212ENST00000498463 SEC13P55735 322 aa12.91□□□□□ -0.34
SNX13-212ENST00000498463 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
SNX13-212ENST00000498463 ARHGAP9Q9BRR9 750 aa12.91□□□□□ -0.34
SNX13-212ENST00000498463 ZBTB7BO15156 539 aaPredicted RBP12.9□□□□□ -0.34
SNX13-212ENST00000498463 ICMTO60725 284 aa12.9□□□□□ -0.34
SNX13-212ENST00000498463 DXOO77932 396 aaKnown RBP12.9□□□□□ -0.34
SNX13-212ENST00000498463 VAMP1P23763 118 aa12.9□□□□□ -0.34
SNX13-212ENST00000498463 GTF2IP78347 998 aa12.9□□□□□ -0.34
SNX13-212ENST00000498463 GLYCTKQ8IVS8 523 aa12.9□□□□□ -0.34
SNX13-212ENST00000498463 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
SNX13-212ENST00000498463 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
SNX13-212ENST00000498463 ERBB3P21860 1342 aa12.89□□□□□ -0.35
SNX13-212ENST00000498463 APLP1P51693 650 aa12.89□□□□□ -0.35
SNX13-212ENST00000498463 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
SNX13-212ENST00000498463 FBXO33Q7Z6M2 555 aa12.89□□□□□ -0.35
SNX13-212ENST00000498463 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
SNX13-212ENST00000498463 OXLD1Q5BKU9 147 aa12.88□□□□□ -0.35
SNX13-212ENST00000498463 POTEHQ6S545 545 aa12.88□□□□□ -0.35
SNX13-212ENST00000498463 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
SNX13-212ENST00000498463 PCDHB3Q9Y5E6 796 aa12.88□□□□□ -0.35
SNX13-212ENST00000498463 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
SNX13-212ENST00000498463 TPCN2Q8NHX9 752 aa12.87□□□□□ -0.35
SNX13-212ENST00000498463 MAPK1P28482 360 aa12.86□□□□□ -0.35
SNX13-212ENST00000498463 CCDC102BQ68D86 513 aa12.86□□□□□ -0.35
SNX13-212ENST00000498463 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
SNX13-212ENST00000498463 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
SNX13-212ENST00000498463 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
SNX13-212ENST00000498463 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
SNX13-212ENST00000498463 C21orf2O43822 256 aa12.85□□□□□ -0.35
SNX13-212ENST00000498463 C8orf37Q96NL8 207 aa12.85□□□□□ -0.35
SNX13-212ENST00000498463 ASB16Q96NS5 453 aa12.85□□□□□ -0.35
SNX13-212ENST00000498463 MMP16P51512 607 aa12.84□□□□□ -0.35
SNX13-212ENST00000498463 TAGLNQ01995 201 aaKnown RBP12.84□□□□□ -0.35
SNX13-212ENST00000498463 GTF3C2Q8WUA4 911 aaPredicted RBP12.84□□□□□ -0.35
SNX13-212ENST00000498463 DCTN4Q9UJW0 460 aa12.84□□□□□ -0.35
SNX13-212ENST00000498463 RECKO95980 971 aa12.83□□□□□ -0.36
SNX13-212ENST00000498463 HMGB1P09429 215 aaKnown RBP12.83□□□□□ -0.36
SNX13-212ENST00000498463 PPP4CP60510 307 aa12.83□□□□□ -0.36
SNX13-212ENST00000498463 PSME1Q06323 249 aa12.83□□□□□ -0.36
SNX13-212ENST00000498463 FAM160A2Q8N612 972 aaPredicted RBP12.83□□□□□ -0.36
SNX13-212ENST00000498463 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
SNX13-212ENST00000498463 ECM1Q16610 540 aa12.82□□□□□ -0.36
SNX13-212ENST00000498463 PUS7Q96PZ0 661 aaKnown RBP12.82□□□□□ -0.36
SNX13-212ENST00000498463 SEPT3Q9UH03 358 aa12.82□□□□□ -0.36
SNX13-212ENST00000498463 HPS5Q9UPZ3 1129 aa12.82□□□□□ -0.36
SNX13-212ENST00000498463 DNMT3AQ9Y6K1 912 aaPredicted RBP12.82□□□□□ -0.36
SNX13-212ENST00000498463 TK2O00142 265 aa12.81□□□□□ -0.36
SNX13-212ENST00000498463 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
SNX13-212ENST00000498463 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
SNX13-212ENST00000498463 PCDHGA11Q9Y5H2 935 aa12.81□□□□□ -0.36
SNX13-212ENST00000498463 GIGYF1O75420 1035 aaPredicted RBP12.8□□□□□ -0.36
SNX13-212ENST00000498463 LGR5O75473 907 aa12.8□□□□□ -0.36
SNX13-212ENST00000498463 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
SNX13-212ENST00000498463 SPSB2Q99619 263 aa12.8□□□□□ -0.36
SNX13-212ENST00000498463 MKNK1Q9BUB5 465 aa12.8□□□□□ -0.36
SNX13-212ENST00000498463 ZSCAN29Q8IWY8 852 aaPredicted RBP12.79□□□□□ -0.36
SNX13-212ENST00000498463 ANKK1Q8NFD2 765 aa12.79□□□□□ -0.36
SNX13-212ENST00000498463 SREK1Q8WXA9 508 aaKnown RBP12.79□□□□□ -0.36
SNX13-212ENST00000498463 UNC93B1Q9H1C4 597 aa12.79□□□□□ -0.36
SNX13-212ENST00000498463 MAGEB6P1A0A0J9YX57 407 aa12.78□□□□□ -0.36
SNX13-212ENST00000498463 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
SNX13-212ENST00000498463 MTMR3Q13615 1198 aa12.78□□□□□ -0.36
SNX13-212ENST00000498463 HINFPQ9BQA5 517 aa12.78□□□□□ -0.36
SNX13-212ENST00000498463 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
SNX13-212ENST00000498463 FKBP4Q02790 459 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNX13-212ENST00000498463 COL19A1Q14993 1142 aa12.77□□□□□ -0.37
SNX13-212ENST00000498463 SH3RF1Q7Z6J0 888 aa12.77□□□□□ -0.37
SNX13-212ENST00000498463 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
SNX13-212ENST00000498463 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
SNX13-212ENST00000498463 WEE1P30291 646 aa12.76□□□□□ -0.37
SNX13-212ENST00000498463 BCAMP50895 628 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms