RNA–Protein interactions for RNA: ENST00000498396.2

SLFN11-206, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-206ENST00000498396 PANK3Q9H999 370 aa19.04■□□□□ 0.64
SLFN11-206ENST00000498396 COL5A2P05997 1499 aaPredicted RBP19.03■□□□□ 0.64
SLFN11-206ENST00000498396 WASHC2AQ641Q2 1341 aa19.03■□□□□ 0.64
SLFN11-206ENST00000498396 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
SLFN11-206ENST00000498396 SPATA31A5Q5VU36 1347 aa19.02■□□□□ 0.64
SLFN11-206ENST00000498396 SPATA31A7Q8IWB4 1347 aa19.02■□□□□ 0.64
SLFN11-206ENST00000498396 COG3Q96JB2 828 aa19.02■□□□□ 0.64
SLFN11-206ENST00000498396 EP400Q96L91 3159 aa19.02■□□□□ 0.64
SLFN11-206ENST00000498396 CCDC7Q96M83 1385 aa19.02■□□□□ 0.64
SLFN11-206ENST00000498396 FAM98CQ17RN3 349 aaKnown RBP19■□□□□ 0.63
SLFN11-206ENST00000498396 KIF20BQ96Q89 1820 aa19■□□□□ 0.63
SLFN11-206ENST00000498396 SPATA31A1Q5TZJ5 1347 aa19■□□□□ 0.63
SLFN11-206ENST00000498396 USP35Q9P2H5 1018 aa18.99■□□□□ 0.63
SLFN11-206ENST00000498396 EVA1CP58658 441 aa18.98■□□□□ 0.63
SLFN11-206ENST00000498396 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
SLFN11-206ENST00000498396 LTN1O94822 1766 aa18.97■□□□□ 0.63
SLFN11-206ENST00000498396 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
SLFN11-206ENST00000498396 SEPT12Q8IYM1 358 aa18.97■□□□□ 0.63
SLFN11-206ENST00000498396 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
SLFN11-206ENST00000498396 ONECUT3O60422 494 aaPredicted RBP18.95■□□□□ 0.62
SLFN11-206ENST00000498396 CGNL1Q0VF96 1302 aa18.95■□□□□ 0.62
SLFN11-206ENST00000498396 CRB1P82279 1406 aa18.93■□□□□ 0.62
SLFN11-206ENST00000498396 THSD7AQ9UPZ6 1657 aa18.93■□□□□ 0.62
SLFN11-206ENST00000498396 ABCC6O95255 1503 aa18.93■□□□□ 0.62
SLFN11-206ENST00000498396 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
SLFN11-206ENST00000498396 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
SLFN11-206ENST00000498396 A0A0G2JS52 829 aa18.92■□□□□ 0.62
SLFN11-206ENST00000498396 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SLFN11-206ENST00000498396 BRWD3Q6RI45 1802 aa18.92■□□□□ 0.62
SLFN11-206ENST00000498396 HOXC9P31274 260 aa18.91■□□□□ 0.62
SLFN11-206ENST00000498396 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
SLFN11-206ENST00000498396 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SLFN11-206ENST00000498396 IP6K1Q92551 441 aa18.91■□□□□ 0.62
SLFN11-206ENST00000498396 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
SLFN11-206ENST00000498396 ERBB3P21860 1342 aa18.91■□□□□ 0.62
SLFN11-206ENST00000498396 PER1O15534 1290 aaPredicted RBP18.9■□□□□ 0.62
SLFN11-206ENST00000498396 CSB-PGBD3P0DP91 1061 aa18.9■□□□□ 0.62
SLFN11-206ENST00000498396 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
SLFN11-206ENST00000498396 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
SLFN11-206ENST00000498396 ANKRD24Q8TF21 1146 aa18.9■□□□□ 0.62
SLFN11-206ENST00000498396 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
SLFN11-206ENST00000498396 FAM182BQ5T319 152 aa18.89■□□□□ 0.61
SLFN11-206ENST00000498396 AMPHP49418 695 aa18.88■□□□□ 0.61
SLFN11-206ENST00000498396 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
SLFN11-206ENST00000498396 UPF1Q92900 1129 aaKnown RBP eCLIP18.88■□□□□ 0.61
SLFN11-206ENST00000498396 BLMP54132 1417 aaPredicted RBP18.87■□□□□ 0.61
SLFN11-206ENST00000498396 HSP90AB2PQ58FF8 381 aa18.87■□□□□ 0.61
SLFN11-206ENST00000498396 ANKRD26Q9UPS8 1709 aa18.87■□□□□ 0.61
SLFN11-206ENST00000498396 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
SLFN11-206ENST00000498396 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
SLFN11-206ENST00000498396 KRT27Q7Z3Y8 459 aa18.86■□□□□ 0.61
SLFN11-206ENST00000498396 CARD10Q9BWT7 1032 aa18.86■□□□□ 0.61
SLFN11-206ENST00000498396 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
SLFN11-206ENST00000498396 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
SLFN11-206ENST00000498396 DISP2A7MBM2 1401 aa18.84■□□□□ 0.61
SLFN11-206ENST00000498396 NSD2O96028 1365 aa18.84■□□□□ 0.61
SLFN11-206ENST00000498396 POLKQ9UBT6 870 aa18.84■□□□□ 0.61
SLFN11-206ENST00000498396 FLT4P35916 1363 aa18.83■□□□□ 0.61
SLFN11-206ENST00000498396 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
SLFN11-206ENST00000498396 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.6
SLFN11-206ENST00000498396 THRAP3Q9Y2W1 955 aaKnown RBP18.83■□□□□ 0.6
SLFN11-206ENST00000498396 LRRC37A3O60309 1634 aa18.82■□□□□ 0.6
SLFN11-206ENST00000498396 WNK3Q9BYP7 1800 aa18.82■□□□□ 0.6
SLFN11-206ENST00000498396 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
SLFN11-206ENST00000498396 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
SLFN11-206ENST00000498396 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
SLFN11-206ENST00000498396 INSRP06213 1382 aa18.81■□□□□ 0.6
SLFN11-206ENST00000498396 PARP4Q9UKK3 1724 aaKnown RBP18.8■□□□□ 0.6
SLFN11-206ENST00000498396 ZEB1P37275 1124 aaPredicted RBP18.8■□□□□ 0.6
SLFN11-206ENST00000498396 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
SLFN11-206ENST00000498396 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
SLFN11-206ENST00000498396 FAM208AQ9UK61 1670 aaKnown RBP18.79■□□□□ 0.6
SLFN11-206ENST00000498396 SMG6Q86US8 1419 aaKnown RBP18.78■□□□□ 0.6
SLFN11-206ENST00000498396 KIF24Q5T7B8 1368 aa18.78■□□□□ 0.6
SLFN11-206ENST00000498396 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.6
SLFN11-206ENST00000498396 MEGF6O75095 1541 aa18.76■□□□□ 0.59
SLFN11-206ENST00000498396 PDE3BQ13370 1112 aa18.75■□□□□ 0.59
SLFN11-206ENST00000498396 DDB1Q16531 1140 aa18.75■□□□□ 0.59
SLFN11-206ENST00000498396 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
SLFN11-206ENST00000498396 NPC1L1Q9UHC9 1359 aa18.74■□□□□ 0.59
SLFN11-206ENST00000498396 IL2RBP14784 551 aa18.74■□□□□ 0.59
SLFN11-206ENST00000498396 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
SLFN11-206ENST00000498396 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
SLFN11-206ENST00000498396 CDCA7Q9BWT1 371 aaPredicted RBP18.72■□□□□ 0.59
SLFN11-206ENST00000498396 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
SLFN11-206ENST00000498396 EYA1Q99502 592 aa18.71■□□□□ 0.59
SLFN11-206ENST00000498396 DDX10Q13206 875 aaKnown RBP18.7■□□□□ 0.58
SLFN11-206ENST00000498396 NCAPD2Q15021 1401 aa18.7■□□□□ 0.58
SLFN11-206ENST00000498396 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
SLFN11-206ENST00000498396 OVOS2A0A0G2JMS6 1433 aa18.69■□□□□ 0.58
SLFN11-206ENST00000498396 EXOC5O00471 708 aa18.69■□□□□ 0.58
SLFN11-206ENST00000498396 TRIM37O94972 964 aa18.69■□□□□ 0.58
SLFN11-206ENST00000498396 MTHFSP49914 203 aa18.69■□□□□ 0.58
SLFN11-206ENST00000498396 FAM196AQ6ZSG2 479 aa18.69■□□□□ 0.58
SLFN11-206ENST00000498396 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
SLFN11-206ENST00000498396 SHANK3Q9BYB0 1731 aa18.66■□□□□ 0.58
SLFN11-206ENST00000498396 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
SLFN11-206ENST00000498396 COL3A1P02461 1466 aaPredicted RBP18.65■□□□□ 0.58
SLFN11-206ENST00000498396 IL13P35225 146 aa18.65■□□□□ 0.58
SLFN11-206ENST00000498396 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms