RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 OVOS2A0A0J9YW53 1432 aa19.12■□□□□ 0.65
VPS26A-209ENST00000497564 OVOS2Q6IE36 1432 aa19.12■□□□□ 0.65
VPS26A-209ENST00000497564 VPS72Q15906 364 aa19.12■□□□□ 0.65
VPS26A-209ENST00000497564 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
VPS26A-209ENST00000497564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
VPS26A-209ENST00000497564 UPF1Q92900 1129 aaKnown RBP eCLIP19.11■□□□□ 0.65
VPS26A-209ENST00000497564 USP31Q70CQ4 1352 aa19.1■□□□□ 0.65
VPS26A-209ENST00000497564 NLRP6P59044 892 aa19.1■□□□□ 0.65
VPS26A-209ENST00000497564 CCDC9Q9Y3X0 531 aaKnown RBP19.1■□□□□ 0.65
VPS26A-209ENST00000497564 GCP02774 474 aa19.09■□□□□ 0.65
VPS26A-209ENST00000497564 NME9Q86XW9 330 aa19.09■□□□□ 0.65
VPS26A-209ENST00000497564 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
VPS26A-209ENST00000497564 ZRANB1Q9UGI0 708 aa19.08■□□□□ 0.64
VPS26A-209ENST00000497564 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
VPS26A-209ENST00000497564 SLIT3O75094 1523 aa19.07■□□□□ 0.64
VPS26A-209ENST00000497564 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
VPS26A-209ENST00000497564 INSRP06213 1382 aa19.06■□□□□ 0.64
VPS26A-209ENST00000497564 CAMTA1Q9Y6Y1 1673 aa19.06■□□□□ 0.64
VPS26A-209ENST00000497564 COG3Q96JB2 828 aa19.06■□□□□ 0.64
VPS26A-209ENST00000497564 CPDO75976 1380 aa19.06■□□□□ 0.64
VPS26A-209ENST00000497564 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
VPS26A-209ENST00000497564 BRWD3Q6RI45 1802 aa19.05■□□□□ 0.64
VPS26A-209ENST00000497564 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
VPS26A-209ENST00000497564 STRN4Q9NRL3 753 aa19.04■□□□□ 0.64
VPS26A-209ENST00000497564 LTN1O94822 1766 aa19.04■□□□□ 0.64
VPS26A-209ENST00000497564 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
VPS26A-209ENST00000497564 SPATA31A5Q5VU36 1347 aa19.03■□□□□ 0.64
VPS26A-209ENST00000497564 SPATA31A7Q8IWB4 1347 aa19.03■□□□□ 0.64
VPS26A-209ENST00000497564 ZBTB7CA1YPR0 619 aa19.03■□□□□ 0.64
VPS26A-209ENST00000497564 SOX12O15370 315 aa19.03■□□□□ 0.64
VPS26A-209ENST00000497564 FAM98CQ17RN3 349 aaKnown RBP19.03■□□□□ 0.64
VPS26A-209ENST00000497564 ONECUT3O60422 494 aaPredicted RBP19.02■□□□□ 0.64
VPS26A-209ENST00000497564 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
VPS26A-209ENST00000497564 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
VPS26A-209ENST00000497564 PEAK1Q9H792 1746 aa19■□□□□ 0.63
VPS26A-209ENST00000497564 MTHFSP49914 203 aa19■□□□□ 0.63
VPS26A-209ENST00000497564 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
VPS26A-209ENST00000497564 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
VPS26A-209ENST00000497564 NFAT5O94916 1531 aa19■□□□□ 0.63
VPS26A-209ENST00000497564 SPATA31A1Q5TZJ5 1347 aa19■□□□□ 0.63
VPS26A-209ENST00000497564 COL18A1P39060 1754 aa18.99■□□□□ 0.63
VPS26A-209ENST00000497564 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
VPS26A-209ENST00000497564 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
VPS26A-209ENST00000497564 COL5A2P05997 1499 aaPredicted RBP18.98■□□□□ 0.63
VPS26A-209ENST00000497564 A0A0G2JS52 829 aa18.98■□□□□ 0.63
VPS26A-209ENST00000497564 MYT1Q01538 1121 aa18.98■□□□□ 0.63
VPS26A-209ENST00000497564 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
VPS26A-209ENST00000497564 AXIN2Q9Y2T1 843 aa18.98■□□□□ 0.63
VPS26A-209ENST00000497564 EVA1CP58658 441 aa18.97■□□□□ 0.63
VPS26A-209ENST00000497564 ARHGEF25Q86VW2 580 aa18.97■□□□□ 0.63
VPS26A-209ENST00000497564 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
VPS26A-209ENST00000497564 THSD7AQ9UPZ6 1657 aa18.97■□□□□ 0.63
VPS26A-209ENST00000497564 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
VPS26A-209ENST00000497564 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
VPS26A-209ENST00000497564 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
VPS26A-209ENST00000497564 FAM182BQ5T319 152 aa18.94■□□□□ 0.62
VPS26A-209ENST00000497564 KRT27Q7Z3Y8 459 aa18.94■□□□□ 0.62
VPS26A-209ENST00000497564 KCNH5Q8NCM2 988 aa18.94■□□□□ 0.62
VPS26A-209ENST00000497564 RGPD1P0DJD0 1748 aa18.93■□□□□ 0.62
VPS26A-209ENST00000497564 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
VPS26A-209ENST00000497564 FBLN1P23142 703 aa18.9■□□□□ 0.62
VPS26A-209ENST00000497564 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
VPS26A-209ENST00000497564 CRB1P82279 1406 aa18.9■□□□□ 0.62
VPS26A-209ENST00000497564 HNRNPUQ00839 825 aaKnown RBP eCLIP18.89■□□□□ 0.61
VPS26A-209ENST00000497564 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.61
VPS26A-209ENST00000497564 TCP11L2Q8N4U5 519 aa18.89■□□□□ 0.61
VPS26A-209ENST00000497564 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
VPS26A-209ENST00000497564 CENPBP07199 599 aaPredicted RBP18.88■□□□□ 0.61
VPS26A-209ENST00000497564 BARGINQ6ZT62 677 aa18.88■□□□□ 0.61
VPS26A-209ENST00000497564 FLT4P35916 1363 aa18.88■□□□□ 0.61
VPS26A-209ENST00000497564 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
VPS26A-209ENST00000497564 ABCC6O95255 1503 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 MAP3K19Q56UN5 1328 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 WDR17Q8IZU2 1322 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
VPS26A-209ENST00000497564 TOM1L2Q6ZVM7 507 aa18.86■□□□□ 0.61
VPS26A-209ENST00000497564 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-209ENST00000497564 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
VPS26A-209ENST00000497564 CSB-PGBD3P0DP91 1061 aa18.83■□□□□ 0.6
VPS26A-209ENST00000497564 IL13P35225 146 aa18.83■□□□□ 0.6
VPS26A-209ENST00000497564 THRAP3Q9Y2W1 955 aaKnown RBP18.83■□□□□ 0.6
VPS26A-209ENST00000497564 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
VPS26A-209ENST00000497564 PARP4Q9UKK3 1724 aaKnown RBP18.82■□□□□ 0.6
VPS26A-209ENST00000497564 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
VPS26A-209ENST00000497564 ERBB3P21860 1342 aa18.81■□□□□ 0.6
VPS26A-209ENST00000497564 CCDC125Q86Z20 511 aa18.81■□□□□ 0.6
VPS26A-209ENST00000497564 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
VPS26A-209ENST00000497564 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
VPS26A-209ENST00000497564 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
VPS26A-209ENST00000497564 AMPHP49418 695 aa18.8■□□□□ 0.6
VPS26A-209ENST00000497564 LRRC37A3O60309 1634 aa18.8■□□□□ 0.6
VPS26A-209ENST00000497564 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
VPS26A-209ENST00000497564 HOXC9P31274 260 aa18.79■□□□□ 0.6
VPS26A-209ENST00000497564 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS26A-209ENST00000497564 PDE3BQ13370 1112 aa18.79■□□□□ 0.6
VPS26A-209ENST00000497564 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
VPS26A-209ENST00000497564 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
VPS26A-209ENST00000497564 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms