RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ZC3H4Q9UPT8 1303 aaKnown RBP8.84□□□□□ -0.99
CD46-218ENST00000496723 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
CD46-218ENST00000496723 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
CD46-218ENST00000496723 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
CD46-218ENST00000496723 PGPEP1Q9NXJ5 209 aa8.84□□□□□ -0.99
CD46-218ENST00000496723 FKBPLQ9UIM3 349 aa8.84□□□□□ -0.99
CD46-218ENST00000496723 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.83□□□□□ -1
CD46-218ENST00000496723 DNMT3LQ9UJW3 386 aa8.83□□□□□ -1
CD46-218ENST00000496723 DHX9Q08211 1270 aaKnown RBP8.82□□□□□ -1
CD46-218ENST00000496723 SH3D19Q5HYK7 790 aa8.82□□□□□ -1
CD46-218ENST00000496723 PPP1R26Q5T8A7 1209 aaPredicted RBP8.82□□□□□ -1
CD46-218ENST00000496723 Q6ZVU0 165 aa8.82□□□□□ -1
CD46-218ENST00000496723 TTLL8A6PVC2 850 aa8.81□□□□□ -1
CD46-218ENST00000496723 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
CD46-218ENST00000496723 SLC10A4Q96EP9 437 aa8.81□□□□□ -1
CD46-218ENST00000496723 DDRGK1Q96HY6 314 aa8.81□□□□□ -1
CD46-218ENST00000496723 GPSM3Q9Y4H4 160 aa8.81□□□□□ -1
CD46-218ENST00000496723 ZBTB33Q86T24 672 aa8.8□□□□□ -1
CD46-218ENST00000496723 LRRN4Q8WUT4 740 aa8.8□□□□□ -1
CD46-218ENST00000496723 KCTD15Q96SI1 283 aaPredicted RBP8.8□□□□□ -1
CD46-218ENST00000496723 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.8□□□□□ -1
CD46-218ENST00000496723 SPINT1O43278 529 aa8.79□□□□□ -1
CD46-218ENST00000496723 PTK2Q05397 1052 aa8.79□□□□□ -1
CD46-218ENST00000496723 PNMA1Q8ND90 353 aa8.78□□□□□ -1
CD46-218ENST00000496723 NR6A1Q15406 480 aa8.77□□□□□ -1.01
CD46-218ENST00000496723 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
CD46-218ENST00000496723 PTSQ03393 145 aa8.76□□□□□ -1.01
CD46-218ENST00000496723 CBLBQ13191 982 aa8.76□□□□□ -1.01
CD46-218ENST00000496723 NBPF20Q3BBV1 942 aa8.75□□□□□ -1.01
CD46-218ENST00000496723 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
CD46-218ENST00000496723 NANOS1Q8WY41 292 aaKnown RBP8.75□□□□□ -1.01
CD46-218ENST00000496723 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
CD46-218ENST00000496723 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CD46-218ENST00000496723 OCSTAMPQ9BR26 566 aa8.74□□□□□ -1.01
CD46-218ENST00000496723 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
CD46-218ENST00000496723 FIGNL2A6NMB9 653 aa8.73□□□□□ -1.01
CD46-218ENST00000496723 AP1G2O75843 785 aa8.73□□□□□ -1.01
CD46-218ENST00000496723 FBXO31Q5XUX0 539 aaPredicted RBP8.73□□□□□ -1.01
CD46-218ENST00000496723 ADAM32Q8TC27 787 aa8.73□□□□□ -1.01
CD46-218ENST00000496723 CCDC155Q8N6L0 562 aa8.72□□□□□ -1.01
CD46-218ENST00000496723 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
CD46-218ENST00000496723 GPBP1L1Q9HC44 474 aaPredicted RBP8.72□□□□□ -1.01
CD46-218ENST00000496723 SLC35F4A4IF30 521 aa8.7□□□□□ -1.02
CD46-218ENST00000496723 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
CD46-218ENST00000496723 GPR161Q8N6U8 529 aaKnown RBP8.7□□□□□ -1.02
CD46-218ENST00000496723 RELBQ01201 579 aa8.69□□□□□ -1.02
CD46-218ENST00000496723 KRT76Q01546 638 aa8.69□□□□□ -1.02
CD46-218ENST00000496723 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
CD46-218ENST00000496723 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
CD46-218ENST00000496723 ITGA6P23229 1130 aa8.68□□□□□ -1.02
CD46-218ENST00000496723 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
CD46-218ENST00000496723 DZIP3Q86Y13 1208 aaKnown RBP8.68□□□□□ -1.02
CD46-218ENST00000496723 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
CD46-218ENST00000496723 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
CD46-218ENST00000496723 INSM2Q96T92 566 aaPredicted RBP8.68□□□□□ -1.02
CD46-218ENST00000496723 COL25A1Q9BXS0 654 aaPredicted RBP8.68□□□□□ -1.02
CD46-218ENST00000496723 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
CD46-218ENST00000496723 SEPT12Q8IYM1 358 aa8.67□□□□□ -1.02
CD46-218ENST00000496723 EPS8L1Q8TE68 723 aa8.67□□□□□ -1.02
CD46-218ENST00000496723 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
CD46-218ENST00000496723 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
CD46-218ENST00000496723 ESPNB1AK53 854 aa8.66□□□□□ -1.02
CD46-218ENST00000496723 ADH1AP07327 375 aa8.66□□□□□ -1.02
CD46-218ENST00000496723 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
CD46-218ENST00000496723 SV2AQ7L0J3 742 aa8.66□□□□□ -1.02
CD46-218ENST00000496723 ZNF784Q8NCA9 323 aaPredicted RBP8.66□□□□□ -1.02
CD46-218ENST00000496723 RNF217Q8TC41 542 aa8.66□□□□□ -1.02
CD46-218ENST00000496723 HMX1Q9NP08 348 aaPredicted RBP8.66□□□□□ -1.02
CD46-218ENST00000496723 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.02
CD46-218ENST00000496723 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
CD46-218ENST00000496723 LILRA1O75019 489 aa8.65□□□□□ -1.02
CD46-218ENST00000496723 RFC5P40937 340 aa8.65□□□□□ -1.02
CD46-218ENST00000496723 ZNF395Q9H8N7 513 aaPredicted RBP8.65□□□□□ -1.02
CD46-218ENST00000496723 TMPRSS4Q9NRS4 437 aa8.65□□□□□ -1.02
CD46-218ENST00000496723 SLURP2P0DP57 97 aa8.64□□□□□ -1.03
CD46-218ENST00000496723 PTGIRP43119 386 aa8.64□□□□□ -1.03
CD46-218ENST00000496723 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
CD46-218ENST00000496723 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
CD46-218ENST00000496723 VWA5B2Q8N398 1253 aa8.64□□□□□ -1.03
CD46-218ENST00000496723 ADAMTS8Q9UP79 889 aa8.63□□□□□ -1.03
CD46-218ENST00000496723 SENP3-EIF4A1A0A087X0R7 540 aa8.62□□□□□ -1.03
CD46-218ENST00000496723 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
CD46-218ENST00000496723 GSK3AP49840 483 aa8.62□□□□□ -1.03
CD46-218ENST00000496723 RAB15P59190 212 aa8.62□□□□□ -1.03
CD46-218ENST00000496723 RNFT1Q5M7Z0 435 aa8.62□□□□□ -1.03
CD46-218ENST00000496723 CDC14CA4D256 554 aa8.61□□□□□ -1.03
CD46-218ENST00000496723 LYSMD3Q7Z3D4 306 aa8.61□□□□□ -1.03
CD46-218ENST00000496723 TMEM151AQ8N4L1 468 aa8.61□□□□□ -1.03
CD46-218ENST00000496723 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
CD46-218ENST00000496723 FOXD4L5Q5VV16 416 aaPredicted RBP8.6□□□□□ -1.03
CD46-218ENST00000496723 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
CD46-218ENST00000496723 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
CD46-218ENST00000496723 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
CD46-218ENST00000496723 TRIM34Q9BYJ4 488 aa8.6□□□□□ -1.03
CD46-218ENST00000496723 ZBBXA8MT70 800 aa8.59□□□□□ -1.03
CD46-218ENST00000496723 RNF144AP50876 292 aaPredicted RBP8.59□□□□□ -1.03
CD46-218ENST00000496723 RASSF7Q02833 373 aa8.59□□□□□ -1.03
CD46-218ENST00000496723 GDF11O95390 407 aa8.58□□□□□ -1.04
CD46-218ENST00000496723 GMCL1Q96IK5 515 aa8.58□□□□□ -1.04
CD46-218ENST00000496723 GPC1P35052 558 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms