RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 PRR36Q9H6K5 1346 aa17.43■□□□□ 0.38
ATG3-209ENST00000496423 ITSN1Q15811 1721 aa17.42■□□□□ 0.38
ATG3-209ENST00000496423 ABTB2Q8N961 1025 aa17.42■□□□□ 0.38
ATG3-209ENST00000496423 NLRP13Q86W25 1043 aa17.4■□□□□ 0.38
ATG3-209ENST00000496423 GPBP1L1Q9HC44 474 aaPredicted RBP17.4■□□□□ 0.38
ATG3-209ENST00000496423 TRAK1Q9UPV9 953 aa17.4■□□□□ 0.38
ATG3-209ENST00000496423 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
ATG3-209ENST00000496423 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
ATG3-209ENST00000496423 BCL9O00512 1426 aa17.38■□□□□ 0.37
ATG3-209ENST00000496423 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
ATG3-209ENST00000496423 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
ATG3-209ENST00000496423 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
ATG3-209ENST00000496423 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
ATG3-209ENST00000496423 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
ATG3-209ENST00000496423 AATKQ6ZMQ8 1374 aa17.37■□□□□ 0.37
ATG3-209ENST00000496423 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
ATG3-209ENST00000496423 GCP02774 474 aa17.36■□□□□ 0.37
ATG3-209ENST00000496423 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
ATG3-209ENST00000496423 ZBTB7CA1YPR0 619 aa17.35■□□□□ 0.37
ATG3-209ENST00000496423 EXOC5O00471 708 aa17.35■□□□□ 0.37
ATG3-209ENST00000496423 LRRC37A3O60309 1634 aa17.35■□□□□ 0.37
ATG3-209ENST00000496423 ACEP12821 1306 aa17.33■□□□□ 0.36
ATG3-209ENST00000496423 USP19O94966 1318 aa17.32■□□□□ 0.36
ATG3-209ENST00000496423 ATP10DQ9P241 1426 aa17.31■□□□□ 0.36
ATG3-209ENST00000496423 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
ATG3-209ENST00000496423 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
ATG3-209ENST00000496423 APLP1P51693 650 aa17.29■□□□□ 0.36
ATG3-209ENST00000496423 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
ATG3-209ENST00000496423 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
ATG3-209ENST00000496423 WDR17Q8IZU2 1322 aa17.27■□□□□ 0.36
ATG3-209ENST00000496423 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
ATG3-209ENST00000496423 CDK19Q9BWU1 502 aa17.27■□□□□ 0.36
ATG3-209ENST00000496423 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
ATG3-209ENST00000496423 BRD4O60885 1362 aaPredicted RBP17.26■□□□□ 0.35
ATG3-209ENST00000496423 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
ATG3-209ENST00000496423 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
ATG3-209ENST00000496423 WNK3Q9BYP7 1800 aa17.25■□□□□ 0.35
ATG3-209ENST00000496423 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG3-209ENST00000496423 NLRP6P59044 892 aa17.24■□□□□ 0.35
ATG3-209ENST00000496423 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
ATG3-209ENST00000496423 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
ATG3-209ENST00000496423 CAPN15O75808 1086 aa17.23■□□□□ 0.35
ATG3-209ENST00000496423 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
ATG3-209ENST00000496423 ZNF827Q17R98 1081 aa17.22■□□□□ 0.35
ATG3-209ENST00000496423 SLC27A3Q5K4L6 730 aa17.22■□□□□ 0.35
ATG3-209ENST00000496423 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
ATG3-209ENST00000496423 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
ATG3-209ENST00000496423 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
ATG3-209ENST00000496423 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
ATG3-209ENST00000496423 NHSQ6T4R5 1651 aa17.21■□□□□ 0.35
ATG3-209ENST00000496423 STAC3Q96MF2 364 aa17.21■□□□□ 0.35
ATG3-209ENST00000496423 PAPPAQ13219 1627 aa17.21■□□□□ 0.35
ATG3-209ENST00000496423 CCDC7Q96M83 1385 aa17.2■□□□□ 0.34
ATG3-209ENST00000496423 COL24A1Q17RW2 1714 aa17.2■□□□□ 0.34
ATG3-209ENST00000496423 PRELPP51888 382 aa17.19■□□□□ 0.34
ATG3-209ENST00000496423 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
ATG3-209ENST00000496423 USP6P35125 1406 aa17.19■□□□□ 0.34
ATG3-209ENST00000496423 TNS4Q8IZW8 715 aa17.18■□□□□ 0.34
ATG3-209ENST00000496423 KCNH5Q8NCM2 988 aa17.18■□□□□ 0.34
ATG3-209ENST00000496423 KDM2AQ9Y2K7 1162 aa17.17■□□□□ 0.34
ATG3-209ENST00000496423 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
ATG3-209ENST00000496423 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
ATG3-209ENST00000496423 DNAJC5GQ8N7S2 189 aa17.16■□□□□ 0.34
ATG3-209ENST00000496423 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
ATG3-209ENST00000496423 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
ATG3-209ENST00000496423 TNS2Q63HR2 1409 aa17.15■□□□□ 0.34
ATG3-209ENST00000496423 BTAF1O14981 1849 aa17.15■□□□□ 0.34
ATG3-209ENST00000496423 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
ATG3-209ENST00000496423 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
ATG3-209ENST00000496423 COL13A1Q5TAT6 717 aaPredicted RBP17.15■□□□□ 0.34
ATG3-209ENST00000496423 ADCY9O60503 1353 aa17.15■□□□□ 0.34
ATG3-209ENST00000496423 ARHGEF28Q8N1W1 1705 aaKnown RBP17.14■□□□□ 0.33
ATG3-209ENST00000496423 TOMM70O94826 608 aa17.14■□□□□ 0.33
ATG3-209ENST00000496423 DCAF11Q8TEB1 546 aa17.14■□□□□ 0.33
ATG3-209ENST00000496423 COL18A1P39060 1754 aa17.14■□□□□ 0.33
ATG3-209ENST00000496423 SLIT3O75094 1523 aa17.13■□□□□ 0.33
ATG3-209ENST00000496423 KIF3CO14782 793 aa17.13■□□□□ 0.33
ATG3-209ENST00000496423 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
ATG3-209ENST00000496423 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
ATG3-209ENST00000496423 CPSF1Q10570 1443 aaKnown RBP17.12■□□□□ 0.33
ATG3-209ENST00000496423 GOLGB1Q14789 3259 aaKnown RBP17.11■□□□□ 0.33
ATG3-209ENST00000496423 RGPD5Q99666 1765 aa17.11■□□□□ 0.33
ATG3-209ENST00000496423 IL2RBP14784 551 aa17.1■□□□□ 0.33
ATG3-209ENST00000496423 ABCC6O95255 1503 aa17.1■□□□□ 0.33
ATG3-209ENST00000496423 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
ATG3-209ENST00000496423 KLRG1Q96E93 195 aa17.08■□□□□ 0.32
ATG3-209ENST00000496423 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
ATG3-209ENST00000496423 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
ATG3-209ENST00000496423 JMYQ8N9B5 988 aa17.06■□□□□ 0.32
ATG3-209ENST00000496423 FLAD1Q8NFF5 587 aa17.06■□□□□ 0.32
ATG3-209ENST00000496423 SOX12O15370 315 aa17.05■□□□□ 0.32
ATG3-209ENST00000496423 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
ATG3-209ENST00000496423 TUBGCP6Q96RT7 1819 aa17.05■□□□□ 0.32
ATG3-209ENST00000496423 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
ATG3-209ENST00000496423 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
ATG3-209ENST00000496423 ZNF692Q9BU19 519 aaPredicted RBP17.04■□□□□ 0.32
ATG3-209ENST00000496423 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
ATG3-209ENST00000496423 CABP2Q9NPB3 220 aa17.03■□□□□ 0.32
ATG3-209ENST00000496423 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
ATG3-209ENST00000496423 MSL1Q68DK7 614 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms