RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 COL5A2P05997 1499 aaPredicted RBP19.92■□□□□ 0.78
SCAP-213ENST00000494938 LMO7Q8WWI1 1683 aa19.92■□□□□ 0.78
SCAP-213ENST00000494938 BARGINQ6ZT62 677 aa19.92■□□□□ 0.78
SCAP-213ENST00000494938 KRT27Q7Z3Y8 459 aa19.91■□□□□ 0.78
SCAP-213ENST00000494938 TCP11L2Q8N4U5 519 aa19.91■□□□□ 0.78
SCAP-213ENST00000494938 PANK3Q9H999 370 aa19.9■□□□□ 0.78
SCAP-213ENST00000494938 A0A0G2JS52 829 aa19.89■□□□□ 0.77
SCAP-213ENST00000494938 MYT1Q01538 1121 aa19.89■□□□□ 0.77
SCAP-213ENST00000494938 WDR17Q8IZU2 1322 aa19.89■□□□□ 0.77
SCAP-213ENST00000494938 THRAP3Q9Y2W1 955 aaKnown RBP19.89■□□□□ 0.77
SCAP-213ENST00000494938 NSD3Q9BZ95 1437 aa19.88■□□□□ 0.77
SCAP-213ENST00000494938 TOM1L2Q6ZVM7 507 aa19.88■□□□□ 0.77
SCAP-213ENST00000494938 IP6K1Q92551 441 aa19.88■□□□□ 0.77
SCAP-213ENST00000494938 COL18A1P39060 1754 aa19.88■□□□□ 0.77
SCAP-213ENST00000494938 EP400Q96L91 3159 aa19.87■□□□□ 0.77
SCAP-213ENST00000494938 CRB1P82279 1406 aa19.86■□□□□ 0.77
SCAP-213ENST00000494938 KIF7Q2M1P5 1343 aa19.86■□□□□ 0.77
SCAP-213ENST00000494938 MAP3K19Q56UN5 1328 aa19.86■□□□□ 0.77
SCAP-213ENST00000494938 CARD10Q9BWT7 1032 aa19.86■□□□□ 0.77
SCAP-213ENST00000494938 USP54Q70EL1 1684 aa19.85■□□□□ 0.77
SCAP-213ENST00000494938 CSB-PGBD3P0DP91 1061 aa19.85■□□□□ 0.77
SCAP-213ENST00000494938 RRS1Q15050 365 aaKnown RBP19.84■□□□□ 0.77
SCAP-213ENST00000494938 FAM182BQ5T319 152 aa19.84■□□□□ 0.77
SCAP-213ENST00000494938 ANKRD24Q8TF21 1146 aa19.83■□□□□ 0.77
SCAP-213ENST00000494938 ERBB3P21860 1342 aa19.82■□□□□ 0.76
SCAP-213ENST00000494938 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
SCAP-213ENST00000494938 MYOM1P52179 1685 aa19.82■□□□□ 0.76
SCAP-213ENST00000494938 HOXC9P31274 260 aa19.82■□□□□ 0.76
SCAP-213ENST00000494938 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
SCAP-213ENST00000494938 AMPHP49418 695 aa19.81■□□□□ 0.76
SCAP-213ENST00000494938 NLRP2Q9NX02 1062 aa19.8■□□□□ 0.76
SCAP-213ENST00000494938 ABCC6O95255 1503 aa19.8■□□□□ 0.76
SCAP-213ENST00000494938 THSD7AQ9UPZ6 1657 aa19.79■□□□□ 0.76
SCAP-213ENST00000494938 PDE3BQ13370 1112 aa19.79■□□□□ 0.76
SCAP-213ENST00000494938 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
SCAP-213ENST00000494938 WASHC2AQ641Q2 1341 aa19.77■□□□□ 0.76
SCAP-213ENST00000494938 BLMP54132 1417 aaPredicted RBP19.77■□□□□ 0.76
SCAP-213ENST00000494938 CDCA7Q9BWT1 371 aaPredicted RBP19.77■□□□□ 0.76
SCAP-213ENST00000494938 CCDC7Q96M83 1385 aa19.76■□□□□ 0.75
SCAP-213ENST00000494938 PER1O15534 1290 aaPredicted RBP19.76■□□□□ 0.75
SCAP-213ENST00000494938 HSP90AB2PQ58FF8 381 aa19.76■□□□□ 0.75
SCAP-213ENST00000494938 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
SCAP-213ENST00000494938 BRWD3Q6RI45 1802 aa19.76■□□□□ 0.75
SCAP-213ENST00000494938 DDB1Q16531 1140 aa19.75■□□□□ 0.75
SCAP-213ENST00000494938 EMILIN1Q9Y6C2 1016 aa19.75■□□□□ 0.75
SCAP-213ENST00000494938 POLKQ9UBT6 870 aa19.74■□□□□ 0.75
SCAP-213ENST00000494938 KNSTRNQ9Y448 316 aa19.74■□□□□ 0.75
SCAP-213ENST00000494938 DISP2A7MBM2 1401 aa19.74■□□□□ 0.75
SCAP-213ENST00000494938 RTL1A6NKG5 1358 aa19.73■□□□□ 0.75
SCAP-213ENST00000494938 AMER1Q5JTC6 1135 aaPredicted RBP19.73■□□□□ 0.75
SCAP-213ENST00000494938 EXOC5O00471 708 aa19.72■□□□□ 0.75
SCAP-213ENST00000494938 TNNT2P45379 298 aaPredicted RBP19.72■□□□□ 0.75
SCAP-213ENST00000494938 NBPF6Q5VWK0 638 aa19.72■□□□□ 0.75
SCAP-213ENST00000494938 DEFB132Q7Z7B7 95 aa19.72■□□□□ 0.75
SCAP-213ENST00000494938 MARCH10Q8NA82 808 aaPredicted RBP19.72■□□□□ 0.75
SCAP-213ENST00000494938 NBPF4Q96M43 638 aa19.72■□□□□ 0.75
SCAP-213ENST00000494938 KIF24Q5T7B8 1368 aa19.71■□□□□ 0.75
SCAP-213ENST00000494938 INSRP06213 1382 aa19.7■□□□□ 0.74
SCAP-213ENST00000494938 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
SCAP-213ENST00000494938 PPM1GO15355 546 aaPredicted RBP19.7■□□□□ 0.74
SCAP-213ENST00000494938 TRIM37O94972 964 aa19.7■□□□□ 0.74
SCAP-213ENST00000494938 IL2RBP14784 551 aa19.7■□□□□ 0.74
SCAP-213ENST00000494938 FLT4P35916 1363 aa19.7■□□□□ 0.74
SCAP-213ENST00000494938 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
SCAP-213ENST00000494938 MORC1Q86VD1 984 aa19.69■□□□□ 0.74
SCAP-213ENST00000494938 LTN1O94822 1766 aa19.68■□□□□ 0.74
SCAP-213ENST00000494938 NSD2O96028 1365 aa19.68■□□□□ 0.74
SCAP-213ENST00000494938 KIF20BQ96Q89 1820 aa19.65■□□□□ 0.74
SCAP-213ENST00000494938 USHBP1Q8N6Y0 703 aa19.65■□□□□ 0.74
SCAP-213ENST00000494938 EN1Q05925 392 aaPredicted RBP19.64■□□□□ 0.73
SCAP-213ENST00000494938 PARP4Q9UKK3 1724 aaKnown RBP19.64■□□□□ 0.73
SCAP-213ENST00000494938 PEAK1Q9H792 1746 aa19.63■□□□□ 0.73
SCAP-213ENST00000494938 APBA3O96018 575 aa19.63■□□□□ 0.73
SCAP-213ENST00000494938 BAG6P46379 1132 aa19.63■□□□□ 0.73
SCAP-213ENST00000494938 PTF1AQ7RTS3 328 aa19.63■□□□□ 0.73
SCAP-213ENST00000494938 OVOS2A0A0G2JMS6 1433 aa19.62■□□□□ 0.73
SCAP-213ENST00000494938 BCL9O00512 1426 aa19.62■□□□□ 0.73
SCAP-213ENST00000494938 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
SCAP-213ENST00000494938 EIF4A2Q14240 407 aaKnown RBP19.61■□□□□ 0.73
SCAP-213ENST00000494938 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
SCAP-213ENST00000494938 EYA1Q99502 592 aa19.61■□□□□ 0.73
SCAP-213ENST00000494938 TNS2Q63HR2 1409 aa19.6■□□□□ 0.73
SCAP-213ENST00000494938 SMG6Q86US8 1419 aaKnown RBP19.6■□□□□ 0.73
SCAP-213ENST00000494938 ZCRB1Q8TBF4 217 aaKnown RBP19.6■□□□□ 0.73
SCAP-213ENST00000494938 DDX54Q8TDD1 881 aaKnown RBP19.6■□□□□ 0.73
SCAP-213ENST00000494938 BCL11BQ9C0K0 894 aaPredicted RBP19.6■□□□□ 0.73
SCAP-213ENST00000494938 LRRC37A3O60309 1634 aa19.6■□□□□ 0.73
SCAP-213ENST00000494938 EZH2Q15910 746 aaKnown RBP19.59■□□□□ 0.73
SCAP-213ENST00000494938 NPC1L1Q9UHC9 1359 aa19.58■□□□□ 0.73
SCAP-213ENST00000494938 KCNQ2O43526 872 aa19.58■□□□□ 0.72
SCAP-213ENST00000494938 TATP17735 454 aaPredicted RBP19.57■□□□□ 0.72
SCAP-213ENST00000494938 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
SCAP-213ENST00000494938 MEGF6O75095 1541 aa19.56■□□□□ 0.72
SCAP-213ENST00000494938 MTHFSP49914 203 aa19.56■□□□□ 0.72
SCAP-213ENST00000494938 CNGB1Q14028 1251 aaPredicted RBP19.55■□□□□ 0.72
SCAP-213ENST00000494938 NCAPD2Q15021 1401 aa19.55■□□□□ 0.72
SCAP-213ENST00000494938 ACSBG1Q96GR2 724 aa19.55■□□□□ 0.72
SCAP-213ENST00000494938 PLSCR1O15162 318 aa19.54■□□□□ 0.72
SCAP-213ENST00000494938 FAM208AQ9UK61 1670 aaKnown RBP19.54■□□□□ 0.72
SCAP-213ENST00000494938 IL13P35225 146 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms