RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
PDLIM1-205ENST00000493949 ATP7BP35670 1465 aa14.95□□□□□ -0.02
PDLIM1-205ENST00000493949 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
PDLIM1-205ENST00000493949 SAFB2Q14151 953 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDLIM1-205ENST00000493949 LARP1Q6PKG0 1096 aaKnown RBP14.94□□□□□ -0.02
PDLIM1-205ENST00000493949 PROM2Q8N271 834 aa14.94□□□□□ -0.02
PDLIM1-205ENST00000493949 GOLGB1Q14789 3259 aaKnown RBP14.94□□□□□ -0.02
PDLIM1-205ENST00000493949 LRRC37A3O60309 1634 aa14.93□□□□□ -0.02
PDLIM1-205ENST00000493949 EVA1CP58658 441 aa14.93□□□□□ -0.02
PDLIM1-205ENST00000493949 ATF5Q9Y2D1 282 aaPredicted RBP14.93□□□□□ -0.02
PDLIM1-205ENST00000493949 CPDO75976 1380 aa14.93□□□□□ -0.02
PDLIM1-205ENST00000493949 BCL9O00512 1426 aa14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 ZC3H6P61129 1189 aaKnown RBP14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 BCL11BQ9C0K0 894 aaPredicted RBP14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 AKAP12Q02952 1782 aa14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
PDLIM1-205ENST00000493949 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
PDLIM1-205ENST00000493949 POGKQ9P215 609 aa14.91□□□□□ -0.02
PDLIM1-205ENST00000493949 TIMELESSQ9UNS1 1208 aa14.91□□□□□ -0.02
PDLIM1-205ENST00000493949 AATKQ6ZMQ8 1374 aa14.9□□□□□ -0.02
PDLIM1-205ENST00000493949 SLC15A2Q16348 729 aa14.9□□□□□ -0.02
PDLIM1-205ENST00000493949 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
PDLIM1-205ENST00000493949 ADGRB1O14514 1584 aa14.9□□□□□ -0.02
PDLIM1-205ENST00000493949 COL5A2P05997 1499 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-205ENST00000493949 COL24A1Q17RW2 1714 aa14.89□□□□□ -0.03
PDLIM1-205ENST00000493949 WASLO00401 505 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-205ENST00000493949 STK32BQ9NY57 414 aa14.89□□□□□ -0.03
PDLIM1-205ENST00000493949 PTF1AQ7RTS3 328 aa14.88□□□□□ -0.03
PDLIM1-205ENST00000493949 ARXQ96QS3 562 aa14.88□□□□□ -0.03
PDLIM1-205ENST00000493949 CRB1P82279 1406 aa14.88□□□□□ -0.03
PDLIM1-205ENST00000493949 HIRIP3Q9BW71 556 aaPredicted RBP14.87□□□□□ -0.03
PDLIM1-205ENST00000493949 TOPAZ1Q8N9V7 1692 aa14.86□□□□□ -0.03
PDLIM1-205ENST00000493949 USP19O94966 1318 aa14.86□□□□□ -0.03
PDLIM1-205ENST00000493949 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
PDLIM1-205ENST00000493949 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
PDLIM1-205ENST00000493949 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
PDLIM1-205ENST00000493949 MINK1Q8N4C8 1332 aaPredicted RBP14.85□□□□□ -0.03
PDLIM1-205ENST00000493949 POLR3AO14802 1390 aaPredicted RBP14.85□□□□□ -0.03
PDLIM1-205ENST00000493949 QSER1Q2KHR3 1735 aa14.84□□□□□ -0.03
PDLIM1-205ENST00000493949 DDB1Q16531 1140 aa14.84□□□□□ -0.03
PDLIM1-205ENST00000493949 GPR162Q16538 588 aa14.84□□□□□ -0.03
PDLIM1-205ENST00000493949 COL18A1P39060 1754 aa14.82□□□□□ -0.04
PDLIM1-205ENST00000493949 NUTM2GQ5VZR2 741 aa14.81□□□□□ -0.04
PDLIM1-205ENST00000493949 MARCH10Q8NA82 808 aaPredicted RBP14.81□□□□□ -0.04
PDLIM1-205ENST00000493949 HSPA6P17066 643 aa14.8□□□□□ -0.04
PDLIM1-205ENST00000493949 NUDT16Q96DE0 195 aaKnown RBP14.8□□□□□ -0.04
PDLIM1-205ENST00000493949 TRAK1Q9UPV9 953 aa14.8□□□□□ -0.04
PDLIM1-205ENST00000493949 NHSQ6T4R5 1651 aa14.8□□□□□ -0.04
PDLIM1-205ENST00000493949 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
PDLIM1-205ENST00000493949 GCP02774 474 aa14.79□□□□□ -0.04
PDLIM1-205ENST00000493949 CDCA7Q9BWT1 371 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1-205ENST00000493949 CHRDL2Q6WN34 429 aa14.78□□□□□ -0.04
PDLIM1-205ENST00000493949 ABTB2Q8N961 1025 aa14.78□□□□□ -0.04
PDLIM1-205ENST00000493949 MPHOSPH9Q99550 1183 aa14.78□□□□□ -0.04
PDLIM1-205ENST00000493949 ACEP12821 1306 aa14.77□□□□□ -0.04
PDLIM1-205ENST00000493949 POLA2Q14181 598 aa14.77□□□□□ -0.05
PDLIM1-205ENST00000493949 SUPT16HQ9Y5B9 1047 aaKnown RBP14.77□□□□□ -0.05
PDLIM1-205ENST00000493949 PLEKHG3A1L390 1219 aa14.76□□□□□ -0.05
PDLIM1-205ENST00000493949 NLRP13Q86W25 1043 aa14.76□□□□□ -0.05
PDLIM1-205ENST00000493949 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
PDLIM1-205ENST00000493949 SLIT3O75094 1523 aa14.75□□□□□ -0.05
PDLIM1-205ENST00000493949 BTAF1O14981 1849 aa14.75□□□□□ -0.05
PDLIM1-205ENST00000493949 RGPD5Q99666 1765 aa14.75□□□□□ -0.05
PDLIM1-205ENST00000493949 ATP10DQ9P241 1426 aa14.75□□□□□ -0.05
PDLIM1-205ENST00000493949 RAB3GAP2Q9H2M9 1393 aa14.74□□□□□ -0.05
PDLIM1-205ENST00000493949 GRIN3BO60391 1043 aa14.74□□□□□ -0.05
PDLIM1-205ENST00000493949 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 TUBGCP6Q96RT7 1819 aa14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 MYCNP04198 464 aaPredicted RBP14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 CCDC61Q9Y6R9 512 aa14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 KAT6BQ8WYB5 2073 aa14.73□□□□□ -0.05
PDLIM1-205ENST00000493949 ADCY9O60503 1353 aa14.72□□□□□ -0.05
PDLIM1-205ENST00000493949 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
PDLIM1-205ENST00000493949 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
PDLIM1-205ENST00000493949 CDK19Q9BWU1 502 aa14.71□□□□□ -0.05
PDLIM1-205ENST00000493949 YBX3P16989 372 aaKnown RBP eCLIP14.7□□□□□ -0.066e-10■■■□□ 18.4
PDLIM1-205ENST00000493949 POLD1P28340 1107 aa14.7□□□□□ -0.06
PDLIM1-205ENST00000493949 NLGN2Q8NFZ4 835 aa14.7□□□□□ -0.06
PDLIM1-205ENST00000493949 TNS2Q63HR2 1409 aa14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 CCER2I3L3R5 266 aa14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 AKT1S1Q96B36 256 aa14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 CARD10Q9BWT7 1032 aa14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 GPBP1L1Q9HC44 474 aaPredicted RBP14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 ABCC6O95255 1503 aa14.69□□□□□ -0.06
PDLIM1-205ENST00000493949 EXOC5O00471 708 aa14.68□□□□□ -0.06
PDLIM1-205ENST00000493949 AXIN2Q9Y2T1 843 aa14.68□□□□□ -0.06
PDLIM1-205ENST00000493949 KLHL34Q8N239 644 aa14.67□□□□□ -0.06
PDLIM1-205ENST00000493949 LRRC4BQ9NT99 713 aa14.67□□□□□ -0.06
PDLIM1-205ENST00000493949 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
PDLIM1-205ENST00000493949 PIK3C2AO00443 1686 aa14.66□□□□□ -0.06
PDLIM1-205ENST00000493949 USP6P35125 1406 aa14.66□□□□□ -0.06
PDLIM1-205ENST00000493949 PNPLA7Q6ZV29 1317 aa14.66□□□□□ -0.06
PDLIM1-205ENST00000493949 CCDC7Q96M83 1385 aa14.65□□□□□ -0.06
PDLIM1-205ENST00000493949 KDM2AQ9Y2K7 1162 aa14.65□□□□□ -0.06
PDLIM1-205ENST00000493949 DNAJC5GQ8N7S2 189 aa14.64□□□□□ -0.07
PDLIM1-205ENST00000493949 STAC3Q96MF2 364 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms