RNA–Protein interactions for RNA: ENST00000493752.5

ABCD4-216, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 719 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-216ENST00000493752 RGS17Q9UGC6 210 aaPredicted RBP11□□□□□ -0.65
ABCD4-216ENST00000493752 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
ABCD4-216ENST00000493752 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
ABCD4-216ENST00000493752 VPS72Q15906 364 aa10.99□□□□□ -0.65
ABCD4-216ENST00000493752 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
ABCD4-216ENST00000493752 QTRT2Q9H974 415 aaKnown RBP10.99□□□□□ -0.65
ABCD4-216ENST00000493752 TRPC5Q9UL62 973 aaPredicted RBP10.99□□□□□ -0.65
ABCD4-216ENST00000493752 RTL1A6NKG5 1358 aa10.99□□□□□ -0.65
ABCD4-216ENST00000493752 ANKRD24Q8TF21 1146 aa10.98□□□□□ -0.65
ABCD4-216ENST00000493752 STRN4Q9NRL3 753 aa10.98□□□□□ -0.65
ABCD4-216ENST00000493752 INSRP06213 1382 aa10.98□□□□□ -0.65
ABCD4-216ENST00000493752 FLT4P35916 1363 aa10.98□□□□□ -0.65
ABCD4-216ENST00000493752 BLMP54132 1417 aaPredicted RBP10.98□□□□□ -0.65
ABCD4-216ENST00000493752 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
ABCD4-216ENST00000493752 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
ABCD4-216ENST00000493752 ANP32CO43423 234 aa10.97□□□□□ -0.65
ABCD4-216ENST00000493752 CSB-PGBD3P0DP91 1061 aa10.97□□□□□ -0.65
ABCD4-216ENST00000493752 LARP1Q6PKG0 1096 aaKnown RBP10.97□□□□□ -0.65
ABCD4-216ENST00000493752 WDR17Q8IZU2 1322 aa10.97□□□□□ -0.65
ABCD4-216ENST00000493752 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
ABCD4-216ENST00000493752 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
ABCD4-216ENST00000493752 KIF20BQ96Q89 1820 aa10.96□□□□□ -0.65
ABCD4-216ENST00000493752 ABCC6O95255 1503 aa10.96□□□□□ -0.65
ABCD4-216ENST00000493752 ERBB3P21860 1342 aa10.96□□□□□ -0.65
ABCD4-216ENST00000493752 TOM1L2Q6ZVM7 507 aa10.96□□□□□ -0.65
ABCD4-216ENST00000493752 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.65
ABCD4-216ENST00000493752 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
ABCD4-216ENST00000493752 COL14A1Q05707 1796 aaKnown RBP10.95□□□□□ -0.66
ABCD4-216ENST00000493752 ABCA3Q99758 1704 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 SMG6Q86US8 1419 aaKnown RBP10.95□□□□□ -0.66
ABCD4-216ENST00000493752 SPATA31A1Q5TZJ5 1347 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
ABCD4-216ENST00000493752 RBM6P78332 1123 aaKnown RBP10.95□□□□□ -0.66
ABCD4-216ENST00000493752 POTEAQ6S8J7 498 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 CFAP53Q96M91 514 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 NLRP2Q9NX02 1062 aa10.95□□□□□ -0.66
ABCD4-216ENST00000493752 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
ABCD4-216ENST00000493752 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 ATRNO75882 1429 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 DIAPH1O60610 1272 aaKnown RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 RXRBP28702 533 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 IL13P35225 146 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 NBPF6Q5VWK0 638 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 DIEXFQ68CQ4 756 aaKnown RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 TCP11L2Q8N4U5 519 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 NBPF4Q96M43 638 aa10.94□□□□□ -0.66
ABCD4-216ENST00000493752 THRAP3Q9Y2W1 955 aaKnown RBP10.94□□□□□ -0.66
ABCD4-216ENST00000493752 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
ABCD4-216ENST00000493752 CDK12Q9NYV4 1490 aaPredicted RBP10.93□□□□□ -0.66
ABCD4-216ENST00000493752 CRB1P82279 1406 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 ANKRD26Q9UPS8 1709 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 LMO7Q8WWI1 1683 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 EYA1Q99502 592 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
ABCD4-216ENST00000493752 USP35Q9P2H5 1018 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 NUDCQ9Y266 331 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 COL18A1P39060 1754 aa10.92□□□□□ -0.66
ABCD4-216ENST00000493752 NWD2Q9ULI1 1742 aa10.89□□□□□ -0.67
ABCD4-216ENST00000493752 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
ABCD4-216ENST00000493752 IL2RBP14784 551 aa10.89□□□□□ -0.67
ABCD4-216ENST00000493752 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
ABCD4-216ENST00000493752 PEAK1Q9H792 1746 aa10.89□□□□□ -0.67
ABCD4-216ENST00000493752 U2SURPO15042 1029 aaKnown RBP10.88□□□□□ -0.67
ABCD4-216ENST00000493752 SEPT12Q8IYM1 358 aa10.88□□□□□ -0.67
ABCD4-216ENST00000493752 USHBP1Q8N6Y0 703 aa10.88□□□□□ -0.67
ABCD4-216ENST00000493752 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
ABCD4-216ENST00000493752 MAP2P11137 1827 aaKnown RBP10.88□□□□□ -0.67
ABCD4-216ENST00000493752 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
ABCD4-216ENST00000493752 LTN1O94822 1766 aa10.88□□□□□ -0.67
ABCD4-216ENST00000493752 EXOC5O00471 708 aa10.87□□□□□ -0.67
ABCD4-216ENST00000493752 SULT6B1Q6IMI4 303 aa10.87□□□□□ -0.67
ABCD4-216ENST00000493752 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
ABCD4-216ENST00000493752 FCHSD2O94868 740 aa10.86□□□□□ -0.67
ABCD4-216ENST00000493752 U2AF1L5P0DN76 240 aaPredicted RBP10.86□□□□□ -0.67
ABCD4-216ENST00000493752 TATP17735 454 aaPredicted RBP10.86□□□□□ -0.67
ABCD4-216ENST00000493752 U2AF1Q01081 240 aaKnown RBP eCLIP10.86□□□□□ -0.67
ABCD4-216ENST00000493752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.86□□□□□ -0.67
ABCD4-216ENST00000493752 NRAPQ86VF7 1730 aa10.86□□□□□ -0.67
ABCD4-216ENST00000493752 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.86□□□□□ -0.67
ABCD4-216ENST00000493752 NCAPD2Q15021 1401 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 A0A0G2JS52 829 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 HMOX1P09601 288 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 MYT1Q01538 1121 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 DDB1Q16531 1140 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 CCDC184Q52MB2 194 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 AEBP1Q8IUX7 1158 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 ZCRB1Q8TBF4 217 aaKnown RBP10.85□□□□□ -0.67
ABCD4-216ENST00000493752 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 KDRP35968 1356 aa10.85□□□□□ -0.67
ABCD4-216ENST00000493752 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
ABCD4-216ENST00000493752 PDE3BQ13370 1112 aa10.84□□□□□ -0.67
ABCD4-216ENST00000493752 PNISRQ8TF01 805 aaKnown RBP10.84□□□□□ -0.67
ABCD4-216ENST00000493752 PNNQ9H307 717 aaKnown RBP10.84□□□□□ -0.67
ABCD4-216ENST00000493752 GLI3P10071 1580 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms