RNA–Protein interactions for RNA: ENST00000493283.5

PTCD2-205, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-205ENST00000493283 LTN1O94822 1766 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 ZBTB7CA1YPR0 619 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 C11orf95C9JLR9 678 aaPredicted RBP19.67■□□□□ 0.74
PTCD2-205ENST00000493283 SOCS7O14512 581 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 SOX12O15370 315 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 STRN4Q9NRL3 753 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 ANKRD26Q9UPS8 1709 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 COL18A1P39060 1754 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 CRB1P82279 1406 aa19.67■□□□□ 0.74
PTCD2-205ENST00000493283 GLI3P10071 1580 aa19.66■□□□□ 0.74
PTCD2-205ENST00000493283 GGNBP2Q9H3C7 697 aa19.66■□□□□ 0.74
PTCD2-205ENST00000493283 RGS12O14924 1447 aa19.66■□□□□ 0.74
PTCD2-205ENST00000493283 ONECUT3O60422 494 aaPredicted RBP19.65■□□□□ 0.74
PTCD2-205ENST00000493283 ZRANB1Q9UGI0 708 aa19.65■□□□□ 0.74
PTCD2-205ENST00000493283 SPATA31A1Q5TZJ5 1347 aa19.65■□□□□ 0.74
PTCD2-205ENST00000493283 WDR17Q8IZU2 1322 aa19.65■□□□□ 0.74
PTCD2-205ENST00000493283 BARGINQ6ZT62 677 aa19.64■□□□□ 0.73
PTCD2-205ENST00000493283 CDCA7Q9BWT1 371 aaPredicted RBP19.64■□□□□ 0.73
PTCD2-205ENST00000493283 WASHC2AQ641Q2 1341 aa19.64■□□□□ 0.73
PTCD2-205ENST00000493283 FAM208AQ9UK61 1670 aaKnown RBP19.64■□□□□ 0.73
PTCD2-205ENST00000493283 AMPHP49418 695 aa19.63■□□□□ 0.73
PTCD2-205ENST00000493283 TCP11L2Q8N4U5 519 aa19.63■□□□□ 0.73
PTCD2-205ENST00000493283 IP6K1Q92551 441 aa19.63■□□□□ 0.73
PTCD2-205ENST00000493283 SMG6Q86US8 1419 aaKnown RBP19.62■□□□□ 0.73
PTCD2-205ENST00000493283 CSB-PGBD3P0DP91 1061 aa19.62■□□□□ 0.73
PTCD2-205ENST00000493283 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
PTCD2-205ENST00000493283 TOM1L2Q6ZVM7 507 aa19.61■□□□□ 0.73
PTCD2-205ENST00000493283 FLT4P35916 1363 aa19.6■□□□□ 0.73
PTCD2-205ENST00000493283 ERBB3P21860 1342 aa19.6■□□□□ 0.73
PTCD2-205ENST00000493283 MAP3K19Q56UN5 1328 aa19.6■□□□□ 0.73
PTCD2-205ENST00000493283 A0A0G2JS52 829 aa19.6■□□□□ 0.73
PTCD2-205ENST00000493283 MYT1Q01538 1121 aa19.6■□□□□ 0.73
PTCD2-205ENST00000493283 LARP1Q6PKG0 1096 aaKnown RBP19.59■□□□□ 0.73
PTCD2-205ENST00000493283 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
PTCD2-205ENST00000493283 FAM98CQ17RN3 349 aaKnown RBP19.58■□□□□ 0.72
PTCD2-205ENST00000493283 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
PTCD2-205ENST00000493283 AXIN2Q9Y2T1 843 aa19.58■□□□□ 0.72
PTCD2-205ENST00000493283 THSD7AQ9UPZ6 1657 aa19.57■□□□□ 0.72
PTCD2-205ENST00000493283 HOXC9P31274 260 aa19.57■□□□□ 0.72
PTCD2-205ENST00000493283 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
PTCD2-205ENST00000493283 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
PTCD2-205ENST00000493283 ANKRD24Q8TF21 1146 aa19.56■□□□□ 0.72
PTCD2-205ENST00000493283 INSRP06213 1382 aa19.56■□□□□ 0.72
PTCD2-205ENST00000493283 USP35Q9P2H5 1018 aa19.55■□□□□ 0.72
PTCD2-205ENST00000493283 AMER1Q5JTC6 1135 aaPredicted RBP19.54■□□□□ 0.72
PTCD2-205ENST00000493283 KRT27Q7Z3Y8 459 aa19.54■□□□□ 0.72
PTCD2-205ENST00000493283 CCDC125Q86Z20 511 aa19.54■□□□□ 0.72
PTCD2-205ENST00000493283 PER1O15534 1290 aaPredicted RBP19.53■□□□□ 0.72
PTCD2-205ENST00000493283 RRS1Q15050 365 aaKnown RBP19.53■□□□□ 0.72
PTCD2-205ENST00000493283 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
PTCD2-205ENST00000493283 PARP4Q9UKK3 1724 aaKnown RBP19.53■□□□□ 0.72
PTCD2-205ENST00000493283 MAP2P11137 1827 aaKnown RBP19.51■□□□□ 0.71
PTCD2-205ENST00000493283 PDE3BQ13370 1112 aa19.51■□□□□ 0.71
PTCD2-205ENST00000493283 WNK3Q9BYP7 1800 aa19.51■□□□□ 0.71
PTCD2-205ENST00000493283 BRWD3Q6RI45 1802 aa19.49■□□□□ 0.71
PTCD2-205ENST00000493283 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
PTCD2-205ENST00000493283 DDB1Q16531 1140 aa19.48■□□□□ 0.71
PTCD2-205ENST00000493283 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
PTCD2-205ENST00000493283 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
PTCD2-205ENST00000493283 IL2RBP14784 551 aa19.47■□□□□ 0.71
PTCD2-205ENST00000493283 PEAK1Q9H792 1746 aa19.46■□□□□ 0.71
PTCD2-205ENST00000493283 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
PTCD2-205ENST00000493283 FAM196AQ6ZSG2 479 aa19.46■□□□□ 0.71
PTCD2-205ENST00000493283 EMILIN1Q9Y6C2 1016 aa19.46■□□□□ 0.71
PTCD2-205ENST00000493283 EXOC5O00471 708 aa19.45■□□□□ 0.7
PTCD2-205ENST00000493283 TNNT2P45379 298 aaPredicted RBP19.45■□□□□ 0.7
PTCD2-205ENST00000493283 SF3B2Q13435 895 aaKnown RBP19.45■□□□□ 0.7
PTCD2-205ENST00000493283 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
PTCD2-205ENST00000493283 LTV1Q96GA3 475 aaPredicted RBP19.45■□□□□ 0.7
PTCD2-205ENST00000493283 LRRC37A3O60309 1634 aa19.44■□□□□ 0.7
PTCD2-205ENST00000493283 OVOS2A0A0G2JMS6 1433 aa19.43■□□□□ 0.7
PTCD2-205ENST00000493283 TNS2Q63HR2 1409 aa19.43■□□□□ 0.7
PTCD2-205ENST00000493283 FBLN1P23142 703 aa19.43■□□□□ 0.7
PTCD2-205ENST00000493283 CC2D1BQ5T0F9 858 aaKnown RBP19.43■□□□□ 0.7
PTCD2-205ENST00000493283 RAPGEF4Q8WZA2 1011 aa19.43■□□□□ 0.7
PTCD2-205ENST00000493283 UPF1Q92900 1129 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTCD2-205ENST00000493283 BCL9O00512 1426 aa19.42■□□□□ 0.7
PTCD2-205ENST00000493283 NCAPD2Q15021 1401 aa19.4■□□□□ 0.7
PTCD2-205ENST00000493283 RGPD1P0DJD0 1748 aa19.39■□□□□ 0.69
PTCD2-205ENST00000493283 TATP17735 454 aaPredicted RBP19.38■□□□□ 0.69
PTCD2-205ENST00000493283 NBPF6Q5VWK0 638 aa19.38■□□□□ 0.69
PTCD2-205ENST00000493283 NBPF4Q96M43 638 aa19.38■□□□□ 0.69
PTCD2-205ENST00000493283 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
PTCD2-205ENST00000493283 MTHFSP49914 203 aa19.36■□□□□ 0.69
PTCD2-205ENST00000493283 EIF4A2Q14240 407 aaKnown RBP19.36■□□□□ 0.69
PTCD2-205ENST00000493283 RGPD2P0DJD1 1756 aa19.35■□□□□ 0.69
PTCD2-205ENST00000493283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.35■□□□□ 0.696e-7■■□□□ 12.6
PTCD2-205ENST00000493283 IGSF1Q8N6C5 1336 aa19.34■□□□□ 0.69
PTCD2-205ENST00000493283 BAG6P46379 1132 aa19.34■□□□□ 0.69
PTCD2-205ENST00000493283 RALBP1Q15311 655 aa19.34■□□□□ 0.69
PTCD2-205ENST00000493283 ZCRB1Q8TBF4 217 aaKnown RBP19.34■□□□□ 0.69
PTCD2-205ENST00000493283 PCDH11XQ9BZA7 1347 aa19.33■□□□□ 0.69
PTCD2-205ENST00000493283 PCDH11YQ9BZA8 1340 aa19.33■□□□□ 0.69
PTCD2-205ENST00000493283 DDX10Q13206 875 aaKnown RBP19.33■□□□□ 0.68
PTCD2-205ENST00000493283 EYA1Q99502 592 aa19.33■□□□□ 0.68
PTCD2-205ENST00000493283 SPG7Q9UQ90 795 aa19.33■□□□□ 0.68
PTCD2-205ENST00000493283 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
PTCD2-205ENST00000493283 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
PTCD2-205ENST00000493283 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
PTCD2-205ENST00000493283 MEGF6O75095 1541 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms