RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 COG3Q96JB2 828 aa21.02■□□□□ 0.96
SS18L1-204ENST00000491916 RGPD5Q99666 1765 aa21.02■□□□□ 0.96
SS18L1-204ENST00000491916 EP400Q96L91 3159 aa21.01■□□□□ 0.95
SS18L1-204ENST00000491916 LARP1Q6PKG0 1096 aaKnown RBP21■□□□□ 0.95
SS18L1-204ENST00000491916 LTN1O94822 1766 aa21■□□□□ 0.95
SS18L1-204ENST00000491916 STRN4Q9NRL3 753 aa20.99■□□□□ 0.95
SS18L1-204ENST00000491916 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
SS18L1-204ENST00000491916 ABCC6O95255 1503 aa20.99■□□□□ 0.95
SS18L1-204ENST00000491916 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
SS18L1-204ENST00000491916 PER1O15534 1290 aaPredicted RBP20.96■□□□□ 0.95
SS18L1-204ENST00000491916 CCDC9Q9Y3X0 531 aaKnown RBP20.96■□□□□ 0.95
SS18L1-204ENST00000491916 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
SS18L1-204ENST00000491916 MAP3K19Q56UN5 1328 aa20.96■□□□□ 0.95
SS18L1-204ENST00000491916 EVA1CP58658 441 aa20.95■□□□□ 0.94
SS18L1-204ENST00000491916 BRWD3Q6RI45 1802 aa20.94■□□□□ 0.94
SS18L1-204ENST00000491916 THSD7AQ9UPZ6 1657 aa20.93■□□□□ 0.94
SS18L1-204ENST00000491916 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
SS18L1-204ENST00000491916 FAM98CQ17RN3 349 aaKnown RBP20.93■□□□□ 0.94
SS18L1-204ENST00000491916 SEPT12Q8IYM1 358 aa20.93■□□□□ 0.94
SS18L1-204ENST00000491916 IP6K1Q92551 441 aa20.93■□□□□ 0.94
SS18L1-204ENST00000491916 WDR17Q8IZU2 1322 aa20.93■□□□□ 0.94
SS18L1-204ENST00000491916 ANKRD26Q9UPS8 1709 aa20.92■□□□□ 0.94
SS18L1-204ENST00000491916 AMER1Q5JTC6 1135 aaPredicted RBP20.92■□□□□ 0.94
SS18L1-204ENST00000491916 CRB1P82279 1406 aa20.92■□□□□ 0.94
SS18L1-204ENST00000491916 ERBB3P21860 1342 aa20.91■□□□□ 0.94
SS18L1-204ENST00000491916 PEAK1Q9H792 1746 aa20.91■□□□□ 0.94
SS18L1-204ENST00000491916 HOXC9P31274 260 aa20.9■□□□□ 0.94
SS18L1-204ENST00000491916 BARGINQ6ZT62 677 aa20.9■□□□□ 0.94
SS18L1-204ENST00000491916 BLMP54132 1417 aaPredicted RBP20.89■□□□□ 0.94
SS18L1-204ENST00000491916 TCP11L2Q8N4U5 519 aa20.89■□□□□ 0.93
SS18L1-204ENST00000491916 USP35Q9P2H5 1018 aa20.89■□□□□ 0.93
SS18L1-204ENST00000491916 ZEB1P37275 1124 aaPredicted RBP20.88■□□□□ 0.93
SS18L1-204ENST00000491916 NSD2O96028 1365 aa20.87■□□□□ 0.93
SS18L1-204ENST00000491916 ANKRD24Q8TF21 1146 aa20.87■□□□□ 0.93
SS18L1-204ENST00000491916 CARD10Q9BWT7 1032 aa20.87■□□□□ 0.93
SS18L1-204ENST00000491916 THRAP3Q9Y2W1 955 aaKnown RBP20.87■□□□□ 0.93
SS18L1-204ENST00000491916 KNSTRNQ9Y448 316 aa20.87■□□□□ 0.93
SS18L1-204ENST00000491916 RTL1A6NKG5 1358 aa20.86■□□□□ 0.93
SS18L1-204ENST00000491916 MAP2P11137 1827 aaKnown RBP20.86■□□□□ 0.93
SS18L1-204ENST00000491916 TOM1L2Q6ZVM7 507 aa20.86■□□□□ 0.93
SS18L1-204ENST00000491916 EMILIN1Q9Y6C2 1016 aa20.86■□□□□ 0.93
SS18L1-204ENST00000491916 AMPHP49418 695 aa20.85■□□□□ 0.93
SS18L1-204ENST00000491916 POLKQ9UBT6 870 aa20.85■□□□□ 0.93
SS18L1-204ENST00000491916 UPF1Q92900 1129 aaKnown RBP eCLIP20.84■□□□□ 0.93
SS18L1-204ENST00000491916 DISP2A7MBM2 1401 aa20.84■□□□□ 0.93
SS18L1-204ENST00000491916 KIF24Q5T7B8 1368 aa20.84■□□□□ 0.93
SS18L1-204ENST00000491916 HSP90AB2PQ58FF8 381 aa20.83■□□□□ 0.93
SS18L1-204ENST00000491916 WNK3Q9BYP7 1800 aa20.83■□□□□ 0.92
SS18L1-204ENST00000491916 PARP4Q9UKK3 1724 aaKnown RBP20.82■□□□□ 0.92
SS18L1-204ENST00000491916 CSB-PGBD3P0DP91 1061 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 KRT27Q7Z3Y8 459 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 INSRP06213 1382 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 FLT4P35916 1363 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 RGPD2P0DJD1 1756 aa20.82■□□□□ 0.92
SS18L1-204ENST00000491916 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
SS18L1-204ENST00000491916 LTV1Q96GA3 475 aaPredicted RBP20.8■□□□□ 0.92
SS18L1-204ENST00000491916 SMG6Q86US8 1419 aaKnown RBP20.79■□□□□ 0.92
SS18L1-204ENST00000491916 MORC1Q86VD1 984 aa20.79■□□□□ 0.92
SS18L1-204ENST00000491916 NLRP2Q9NX02 1062 aa20.79■□□□□ 0.92
SS18L1-204ENST00000491916 FAM208AQ9UK61 1670 aaKnown RBP20.79■□□□□ 0.92
SS18L1-204ENST00000491916 A0A0G2JS52 829 aa20.78■□□□□ 0.92
SS18L1-204ENST00000491916 MYT1Q01538 1121 aa20.78■□□□□ 0.92
SS18L1-204ENST00000491916 FAM182BQ5T319 152 aa20.78■□□□□ 0.92
SS18L1-204ENST00000491916 LRRC37A3O60309 1634 aa20.78■□□□□ 0.92
SS18L1-204ENST00000491916 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.92
SS18L1-204ENST00000491916 NBPF4Q96M43 638 aa20.77■□□□□ 0.92
SS18L1-204ENST00000491916 CC2D1BQ5T0F9 858 aaKnown RBP20.76■□□□□ 0.91
SS18L1-204ENST00000491916 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
SS18L1-204ENST00000491916 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
SS18L1-204ENST00000491916 NCAPD2Q15021 1401 aa20.73■□□□□ 0.91
SS18L1-204ENST00000491916 IL2RBP14784 551 aa20.71■□□□□ 0.91
SS18L1-204ENST00000491916 EIF4A2Q14240 407 aaKnown RBP20.71■□□□□ 0.91
SS18L1-204ENST00000491916 DDB1Q16531 1140 aa20.71■□□□□ 0.91
SS18L1-204ENST00000491916 USHBP1Q8N6Y0 703 aa20.71■□□□□ 0.91
SS18L1-204ENST00000491916 MARCH10Q8NA82 808 aaPredicted RBP20.71■□□□□ 0.91
SS18L1-204ENST00000491916 PDE3BQ13370 1112 aa20.7■□□□□ 0.9
SS18L1-204ENST00000491916 MEGF6O75095 1541 aa20.69■□□□□ 0.9
SS18L1-204ENST00000491916 EYA1Q99502 592 aa20.69■□□□□ 0.9
SS18L1-204ENST00000491916 TNS2Q63HR2 1409 aa20.69■□□□□ 0.9
SS18L1-204ENST00000491916 EXOC5O00471 708 aa20.67■□□□□ 0.9
SS18L1-204ENST00000491916 MTHFSP49914 203 aa20.67■□□□□ 0.9
SS18L1-204ENST00000491916 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
SS18L1-204ENST00000491916 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
SS18L1-204ENST00000491916 CNGB1Q14028 1251 aaPredicted RBP20.66■□□□□ 0.9
SS18L1-204ENST00000491916 BCL9O00512 1426 aa20.66■□□□□ 0.9
SS18L1-204ENST00000491916 SHANK3Q9BYB0 1731 aa20.65■□□□□ 0.9
SS18L1-204ENST00000491916 OVOS2A0A0G2JMS6 1433 aa20.65■□□□□ 0.9
SS18L1-204ENST00000491916 CCDC125Q86Z20 511 aa20.65■□□□□ 0.9
SS18L1-204ENST00000491916 IL13P35225 146 aa20.64■□□□□ 0.89
SS18L1-204ENST00000491916 SBF2Q86WG5 1849 aa20.64■□□□□ 0.89
SS18L1-204ENST00000491916 IGSF1Q8N6C5 1336 aa20.63■□□□□ 0.89
SS18L1-204ENST00000491916 RGPD1P0DJD0 1748 aa20.63■□□□□ 0.89
SS18L1-204ENST00000491916 TNS1Q9HBL0 1735 aaKnown RBP20.63■□□□□ 0.89
SS18L1-204ENST00000491916 COL3A1P02461 1466 aaPredicted RBP20.62■□□□□ 0.89
SS18L1-204ENST00000491916 TRIM37O94972 964 aa20.61■□□□□ 0.89
SS18L1-204ENST00000491916 PTF1AQ7RTS3 328 aa20.61■□□□□ 0.89
SS18L1-204ENST00000491916 DEFB132Q7Z7B7 95 aa20.6■□□□□ 0.89
SS18L1-204ENST00000491916 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
SS18L1-204ENST00000491916 PPP2R1AP30153 589 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms