RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 NUTM2GQ5VZR2 741 aa16.64■□□□□ 0.25
C3orf49-202ENST00000491896 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
C3orf49-202ENST00000491896 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
C3orf49-202ENST00000491896 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
C3orf49-202ENST00000491896 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
C3orf49-202ENST00000491896 LTN1O94822 1766 aa16.62■□□□□ 0.25
C3orf49-202ENST00000491896 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
C3orf49-202ENST00000491896 RTL1A6NKG5 1358 aa16.62■□□□□ 0.25
C3orf49-202ENST00000491896 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
C3orf49-202ENST00000491896 ANKRD26Q9UPS8 1709 aa16.62■□□□□ 0.25
C3orf49-202ENST00000491896 ZC3H6P61129 1189 aaKnown RBP16.61■□□□□ 0.25
C3orf49-202ENST00000491896 NSD2O96028 1365 aa16.61■□□□□ 0.25
C3orf49-202ENST00000491896 CRB1P82279 1406 aa16.61■□□□□ 0.25
C3orf49-202ENST00000491896 NME9Q86XW9 330 aa16.6■□□□□ 0.25
C3orf49-202ENST00000491896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
C3orf49-202ENST00000491896 THRAP3Q9Y2W1 955 aaKnown RBP16.6■□□□□ 0.25
C3orf49-202ENST00000491896 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
C3orf49-202ENST00000491896 COG3Q96JB2 828 aa16.59■□□□□ 0.25
C3orf49-202ENST00000491896 CGNL1Q0VF96 1302 aa16.59■□□□□ 0.25
C3orf49-202ENST00000491896 SPATA31A1Q5TZJ5 1347 aa16.59■□□□□ 0.25
C3orf49-202ENST00000491896 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
C3orf49-202ENST00000491896 WNK3Q9BYP7 1800 aa16.59■□□□□ 0.25
C3orf49-202ENST00000491896 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
C3orf49-202ENST00000491896 WDR17Q8IZU2 1322 aa16.57■□□□□ 0.24
C3orf49-202ENST00000491896 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
C3orf49-202ENST00000491896 EP400Q96L91 3159 aa16.57■□□□□ 0.24
C3orf49-202ENST00000491896 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
C3orf49-202ENST00000491896 FYB1O15117 783 aa16.55■□□□□ 0.24
C3orf49-202ENST00000491896 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
C3orf49-202ENST00000491896 SPINK5Q9NQ38 1064 aaPredicted RBP16.55■□□□□ 0.24
C3orf49-202ENST00000491896 BRWD3Q6RI45 1802 aa16.54■□□□□ 0.24
C3orf49-202ENST00000491896 CCDC7Q96M83 1385 aa16.54■□□□□ 0.24
C3orf49-202ENST00000491896 ERBB3P21860 1342 aa16.54■□□□□ 0.24
C3orf49-202ENST00000491896 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
C3orf49-202ENST00000491896 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
C3orf49-202ENST00000491896 EVA1CP58658 441 aa16.53■□□□□ 0.24
C3orf49-202ENST00000491896 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
C3orf49-202ENST00000491896 CDCA7Q9BWT1 371 aaPredicted RBP16.53■□□□□ 0.24
C3orf49-202ENST00000491896 CARD14Q9BXL6 1004 aa16.53■□□□□ 0.24
C3orf49-202ENST00000491896 RGPD5Q99666 1765 aa16.52■□□□□ 0.24
C3orf49-202ENST00000491896 C11orf95C9JLR9 678 aaPredicted RBP16.52■□□□□ 0.24
C3orf49-202ENST00000491896 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
C3orf49-202ENST00000491896 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
C3orf49-202ENST00000491896 LRRC37A3O60309 1634 aa16.51■□□□□ 0.23
C3orf49-202ENST00000491896 FAM98CQ17RN3 349 aaKnown RBP16.5■□□□□ 0.23
C3orf49-202ENST00000491896 LARP1Q6PKG0 1096 aaKnown RBP16.5■□□□□ 0.23
C3orf49-202ENST00000491896 IP6K1Q92551 441 aa16.5■□□□□ 0.23
C3orf49-202ENST00000491896 CARD10Q9BWT7 1032 aa16.5■□□□□ 0.23
C3orf49-202ENST00000491896 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
C3orf49-202ENST00000491896 DISP2A7MBM2 1401 aa16.5■□□□□ 0.23
C3orf49-202ENST00000491896 FLT4P35916 1363 aa16.5■□□□□ 0.23
C3orf49-202ENST00000491896 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
C3orf49-202ENST00000491896 ZRANB1Q9UGI0 708 aa16.49■□□□□ 0.23
C3orf49-202ENST00000491896 AXIN2Q9Y2T1 843 aa16.49■□□□□ 0.23
C3orf49-202ENST00000491896 PLEKHG2Q9H7P9 1386 aa16.49■□□□□ 0.23
C3orf49-202ENST00000491896 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
C3orf49-202ENST00000491896 MAP3K19Q56UN5 1328 aa16.48■□□□□ 0.23
C3orf49-202ENST00000491896 BCL9O00512 1426 aa16.48■□□□□ 0.23
C3orf49-202ENST00000491896 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
C3orf49-202ENST00000491896 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
C3orf49-202ENST00000491896 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
C3orf49-202ENST00000491896 INSRP06213 1382 aa16.47■□□□□ 0.23
C3orf49-202ENST00000491896 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
C3orf49-202ENST00000491896 TNS2Q63HR2 1409 aa16.46■□□□□ 0.23
C3orf49-202ENST00000491896 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
C3orf49-202ENST00000491896 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 SOX12O15370 315 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 CAPN15O75808 1086 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 HOXC9P31274 260 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 PANK3Q9H999 370 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
C3orf49-202ENST00000491896 KNSTRNQ9Y448 316 aa16.44■□□□□ 0.22
C3orf49-202ENST00000491896 OVOS2A0A0G2JMS6 1433 aa16.44■□□□□ 0.22
C3orf49-202ENST00000491896 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
C3orf49-202ENST00000491896 CSB-PGBD3P0DP91 1061 aa16.43■□□□□ 0.22
C3orf49-202ENST00000491896 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
C3orf49-202ENST00000491896 AMPHP49418 695 aa16.43■□□□□ 0.22
C3orf49-202ENST00000491896 ANKRD24Q8TF21 1146 aa16.43■□□□□ 0.22
C3orf49-202ENST00000491896 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
C3orf49-202ENST00000491896 A0A0G2JS52 829 aa16.42■□□□□ 0.22
C3orf49-202ENST00000491896 MYT1Q01538 1121 aa16.42■□□□□ 0.22
C3orf49-202ENST00000491896 RGPD3A6NKT7 1758 aaPredicted RBP16.41■□□□□ 0.22
C3orf49-202ENST00000491896 RGPD4Q7Z3J3 1758 aa16.41■□□□□ 0.22
C3orf49-202ENST00000491896 TNS1Q9HBL0 1735 aaKnown RBP16.41■□□□□ 0.22
C3orf49-202ENST00000491896 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
C3orf49-202ENST00000491896 AMER1Q5JTC6 1135 aaPredicted RBP16.4■□□□□ 0.22
C3orf49-202ENST00000491896 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
C3orf49-202ENST00000491896 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
C3orf49-202ENST00000491896 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
C3orf49-202ENST00000491896 PDE3BQ13370 1112 aa16.39■□□□□ 0.21
C3orf49-202ENST00000491896 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
C3orf49-202ENST00000491896 RRS1Q15050 365 aaKnown RBP16.38■□□□□ 0.21
C3orf49-202ENST00000491896 DDB1Q16531 1140 aa16.38■□□□□ 0.21
C3orf49-202ENST00000491896 IL2RBP14784 551 aa16.37■□□□□ 0.21
C3orf49-202ENST00000491896 NLRP2Q9NX02 1062 aa16.37■□□□□ 0.21
C3orf49-202ENST00000491896 POLKQ9UBT6 870 aa16.36■□□□□ 0.21
C3orf49-202ENST00000491896 SF3B2Q13435 895 aaKnown RBP16.35■□□□□ 0.21
C3orf49-202ENST00000491896 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
C3orf49-202ENST00000491896 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms