RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
NUP50-217ENST00000491860 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
NUP50-217ENST00000491860 LARP1Q6PKG0 1096 aaKnown RBP12.39□□□□□ -0.43
NUP50-217ENST00000491860 USP35Q9P2H5 1018 aa12.39□□□□□ -0.43
NUP50-217ENST00000491860 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
NUP50-217ENST00000491860 PARP4Q9UKK3 1724 aaKnown RBP12.39□□□□□ -0.43
NUP50-217ENST00000491860 HDGFL2Q7Z4V5 671 aaPredicted RBP12.38□□□□□ -0.43
NUP50-217ENST00000491860 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
NUP50-217ENST00000491860 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
NUP50-217ENST00000491860 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
NUP50-217ENST00000491860 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
NUP50-217ENST00000491860 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
NUP50-217ENST00000491860 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
NUP50-217ENST00000491860 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NUP50-217ENST00000491860 COL18A1P39060 1754 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 USP31Q70CQ4 1352 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 PEAK1Q9H792 1746 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 KCNQ2O43526 872 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 OVOS2A0A0G2JMS6 1433 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 OVOS2A0A0J9YW53 1432 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 OVOS2Q6IE36 1432 aa12.35□□□□□ -0.43
NUP50-217ENST00000491860 DCAF8L1A6NGE4 600 aa12.34□□□□□ -0.43
NUP50-217ENST00000491860 DDB1Q16531 1140 aa12.34□□□□□ -0.43
NUP50-217ENST00000491860 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
NUP50-217ENST00000491860 CASZ1Q86V15 1759 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 TMC1Q8TDI8 760 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 CARD10Q9BWT7 1032 aa12.33□□□□□ -0.44
NUP50-217ENST00000491860 PPP1R1BQ9UD71 204 aaPredicted RBP12.33□□□□□ -0.44
NUP50-217ENST00000491860 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
NUP50-217ENST00000491860 NFAT5O94916 1531 aa12.32□□□□□ -0.44
NUP50-217ENST00000491860 PLSCR1O15162 318 aa12.32□□□□□ -0.44
NUP50-217ENST00000491860 BCL9O00512 1426 aa12.31□□□□□ -0.44
NUP50-217ENST00000491860 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
NUP50-217ENST00000491860 LRRC37A3O60309 1634 aa12.3□□□□□ -0.44
NUP50-217ENST00000491860 CD163L1Q9NR16 1453 aa12.3□□□□□ -0.44
NUP50-217ENST00000491860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUP50-217ENST00000491860 AXIN2Q9Y2T1 843 aa12.3□□□□□ -0.44
NUP50-217ENST00000491860 RGPD5Q99666 1765 aa12.3□□□□□ -0.44
NUP50-217ENST00000491860 EXOC5O00471 708 aa12.29□□□□□ -0.44
NUP50-217ENST00000491860 SOX12O15370 315 aa12.29□□□□□ -0.44
NUP50-217ENST00000491860 CDCA8Q53HL2 280 aa12.29□□□□□ -0.44
NUP50-217ENST00000491860 CLSPNQ9HAW4 1339 aa12.29□□□□□ -0.44
NUP50-217ENST00000491860 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
NUP50-217ENST00000491860 LTN1O94822 1766 aa12.28□□□□□ -0.44
NUP50-217ENST00000491860 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
NUP50-217ENST00000491860 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
NUP50-217ENST00000491860 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.45
NUP50-217ENST00000491860 TMF1P82094 1093 aa12.27□□□□□ -0.45
NUP50-217ENST00000491860 NME9Q86XW9 330 aa12.27□□□□□ -0.45
NUP50-217ENST00000491860 TESK2Q96S53 571 aa12.27□□□□□ -0.45
NUP50-217ENST00000491860 ERBB3P21860 1342 aa12.27□□□□□ -0.45
NUP50-217ENST00000491860 MYOM1P52179 1685 aa12.26□□□□□ -0.45
NUP50-217ENST00000491860 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
NUP50-217ENST00000491860 COG3Q96JB2 828 aa12.26□□□□□ -0.45
NUP50-217ENST00000491860 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
NUP50-217ENST00000491860 TNS2Q63HR2 1409 aa12.26□□□□□ -0.45
NUP50-217ENST00000491860 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
NUP50-217ENST00000491860 PTGER2P43116 358 aa12.24□□□□□ -0.45
NUP50-217ENST00000491860 MARCH10Q8NA82 808 aaPredicted RBP12.24□□□□□ -0.45
NUP50-217ENST00000491860 USP47Q96K76 1375 aa12.24□□□□□ -0.45
NUP50-217ENST00000491860 NLRP2Q9NX02 1062 aa12.24□□□□□ -0.45
NUP50-217ENST00000491860 CHD4Q14839 1912 aa12.23□□□□□ -0.45
NUP50-217ENST00000491860 IL2RBP14784 551 aa12.23□□□□□ -0.45
NUP50-217ENST00000491860 ZNF784Q8NCA9 323 aaPredicted RBP12.23□□□□□ -0.45
NUP50-217ENST00000491860 ANKRD24Q8TF21 1146 aa12.23□□□□□ -0.45
NUP50-217ENST00000491860 IP6K1Q92551 441 aa12.23□□□□□ -0.45
NUP50-217ENST00000491860 PROM2Q8N271 834 aa12.22□□□□□ -0.45
NUP50-217ENST00000491860 UTRNP46939 3433 aa12.21□□□□□ -0.45
NUP50-217ENST00000491860 RTL1A6NKG5 1358 aa12.21□□□□□ -0.45
NUP50-217ENST00000491860 PDGFDQ9GZP0 370 aaPredicted RBP12.21□□□□□ -0.45
NUP50-217ENST00000491860 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
NUP50-217ENST00000491860 SGIP1Q9BQI5 828 aa12.2□□□□□ -0.46
NUP50-217ENST00000491860 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NUP50-217ENST00000491860 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 ZBTB7AO95365 584 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 AMPHP49418 695 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 SLC15A2Q16348 729 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 PTF1AQ7RTS3 328 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 SYT17Q9BSW7 474 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 MTFR1LQ9H019 292 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 STK32BQ9NY57 414 aa12.19□□□□□ -0.46
NUP50-217ENST00000491860 KAT6BQ8WYB5 2073 aa12.18□□□□□ -0.46
NUP50-217ENST00000491860 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
NUP50-217ENST00000491860 CGNL1Q0VF96 1302 aa12.18□□□□□ -0.46
NUP50-217ENST00000491860 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
NUP50-217ENST00000491860 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
NUP50-217ENST00000491860 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
NUP50-217ENST00000491860 MAP3K19Q56UN5 1328 aa12.17□□□□□ -0.46
NUP50-217ENST00000491860 KIF20BQ96Q89 1820 aa12.17□□□□□ -0.46
NUP50-217ENST00000491860 HMGB2P26583 209 aaKnown RBP12.17□□□□□ -0.46
NUP50-217ENST00000491860 HOXC9P31274 260 aa12.17□□□□□ -0.46
NUP50-217ENST00000491860 FYB1O15117 783 aa12.16□□□□□ -0.46
NUP50-217ENST00000491860 C1QTNF8P60827 252 aa12.16□□□□□ -0.46
NUP50-217ENST00000491860 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
NUP50-217ENST00000491860 LTV1Q96GA3 475 aaPredicted RBP12.15□□□□□ -0.46
NUP50-217ENST00000491860 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms