RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 C4orf48Q5BLP8 95 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 MPNDQ8N594 471 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 ADAM32Q8TC27 787 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 EPS8L1Q8TE68 723 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 TRIM52Q96A61 297 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 CDK15Q96Q40 435 aa3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 TSEN34Q9BSV6 310 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 CDV3Q9UKY7 258 aaKnown RBP3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 ZNF330Q9Y3S2 320 aaPredicted RBP3.83□□□□□ -1.8
SNRNP40-207ENST00000491106 NR3C2P08235 984 aa3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 PRKCSHP14314 528 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 BRPF1P55201 1214 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 PPP1R26Q5T8A7 1209 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 PPP2R2DQ66LE6 453 aa3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 SH3BP5LQ7L8J4 393 aa3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 TRIM46Q7Z4K8 759 aa3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 ZNF395Q9H8N7 513 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 POLMQ9NP87 494 aaPredicted RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 NXF1Q9UBU9 619 aaKnown RBP3.82□□□□□ -1.8
SNRNP40-207ENST00000491106 APBB1O00213 710 aa3.81□□□□□ -1.8
SNRNP40-207ENST00000491106 CBLBQ13191 982 aa3.81□□□□□ -1.8
SNRNP40-207ENST00000491106 NBPF20Q3BBV1 942 aa3.81□□□□□ -1.8
SNRNP40-207ENST00000491106 IRF7Q92985 503 aa3.81□□□□□ -1.8
SNRNP40-207ENST00000491106 NISCHQ9Y2I1 1504 aa3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 ZC3H4Q9UPT8 1303 aaKnown RBP3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 INSM1Q01101 510 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 FBXO31Q5XUX0 539 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 LINC00528Q8N1L1 170 aa3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 AGBL1Q96MI9 1066 aa3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 GOPCQ9HD26 462 aa3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 HMX1Q9NP08 348 aaPredicted RBP3.8□□□□□ -1.8
SNRNP40-207ENST00000491106 FAM181BA6NEQ2 426 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 TTLL8A6PVC2 850 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 ZBBXA8MT70 800 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 MEN1O00255 615 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 SH3RF1Q7Z6J0 888 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 NLRP3Q96P20 1036 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 TMPRSS4Q9NRS4 437 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 GPSM3Q9Y4H4 160 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 MAP4K5Q9Y4K4 846 aa3.79□□□□□ -1.8
SNRNP40-207ENST00000491106 ERVH48-1M5A8F1 160 aa3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 GIGYF1O75420 1035 aaPredicted RBP3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 INTS6LQ5JSJ4 861 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 RNF20Q5VTR2 975 aa3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 TRMT44Q8IYL2 757 aaKnown RBP3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 ZNF592Q92610 1267 aa3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 CYLDQ9NQC7 956 aa3.78□□□□□ -1.8
SNRNP40-207ENST00000491106 CDC14CA4D256 554 aa3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 GTF2E1P29083 439 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 NFX1Q12986 1120 aaKnown RBP3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 SLC27A3Q5K4L6 730 aa3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 PRICKLE2Q7Z3G6 844 aa3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 INSM2Q96T92 566 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 C1QTNF2Q9BXJ5 285 aa3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 KLF16Q9BXK1 252 aaPredicted RBP3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 NDUFB9Q9Y6M9 179 aa3.77□□□□□ -1.81
SNRNP40-207ENST00000491106 GMPRP36959 345 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 ABL2P42684 1182 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 RIPOR1Q6ZS17 1223 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 WWC1Q8IX03 1113 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 MEIOBQ8N635 442 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 ZNF784Q8NCA9 323 aaPredicted RBP3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 BANK1Q8NDB2 785 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 SNRKQ9NRH2 765 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 PCDHB11Q9Y5F2 797 aa3.76□□□□□ -1.81
SNRNP40-207ENST00000491106 ATP5J2-PTCD1G3V325 749 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 PPFIA3O75145 1194 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 MYCP01106 439 aaPredicted RBP3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 FBXO45P0C2W1 286 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 MCCD1P59942 119 aaPredicted RBP3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 EIF4G2P78344 907 aaKnown RBP eCLIP3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 PTSQ03393 145 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 NR1H3Q13133 447 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 SEMA3FQ13275 785 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 SLFNL1Q499Z3 407 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 FOXR1Q6PIV2 292 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 NPAS3Q8IXF0 933 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 VWA5B2Q8N398 1253 aa3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 GAS2L1Q99501 681 aaPredicted RBP3.75□□□□□ -1.81
SNRNP40-207ENST00000491106 SOS2Q07890 1332 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 RAD21O60216 631 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 RHOQP17081 205 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 ADD1P35611 737 aaKnown RBP3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 PTGIRP43119 386 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 CTSOP43234 321 aaPredicted RBP3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 LYSMD3Q7Z3D4 306 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 ZSCAN1Q8NBB4 408 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 OCSTAMPQ9BR26 566 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 TRIM34Q9BYJ4 488 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 DNMT3LQ9UJW3 386 aa3.74□□□□□ -1.81
SNRNP40-207ENST00000491106 H3BM21 787 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 SPINT1O43278 529 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 ADH1AP07327 375 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 CC2D2BQ6DHV5 1058 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 Q6ZVU0 165 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 SV2AQ7L0J3 742 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 SEPT12Q8IYM1 358 aa3.73□□□□□ -1.81
SNRNP40-207ENST00000491106 CCDC155Q8N6L0 562 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms