RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 COL5A2P05997 1499 aaPredicted RBP20.71■□□□□ 0.91
CXCL12-207ENST00000488591 A0A0G2JS52 829 aa20.71■□□□□ 0.91
CXCL12-207ENST00000488591 ONECUT3O60422 494 aaPredicted RBP20.71■□□□□ 0.91
CXCL12-207ENST00000488591 MYT1Q01538 1121 aa20.71■□□□□ 0.91
CXCL12-207ENST00000488591 LARP1Q6PKG0 1096 aaKnown RBP20.71■□□□□ 0.91
CXCL12-207ENST00000488591 AXIN2Q9Y2T1 843 aa20.71■□□□□ 0.91
CXCL12-207ENST00000488591 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
CXCL12-207ENST00000488591 COL18A1P39060 1754 aa20.7■□□□□ 0.9
CXCL12-207ENST00000488591 FAM98CQ17RN3 349 aaKnown RBP20.7■□□□□ 0.9
CXCL12-207ENST00000488591 USP35Q9P2H5 1018 aa20.7■□□□□ 0.9
CXCL12-207ENST00000488591 ABCC6O95255 1503 aa20.69■□□□□ 0.9
CXCL12-207ENST00000488591 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
CXCL12-207ENST00000488591 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
CXCL12-207ENST00000488591 SEPT12Q8IYM1 358 aa20.69■□□□□ 0.9
CXCL12-207ENST00000488591 LTN1O94822 1766 aa20.69■□□□□ 0.9
CXCL12-207ENST00000488591 TOM1L2Q6ZVM7 507 aa20.68■□□□□ 0.9
CXCL12-207ENST00000488591 TCP11L2Q8N4U5 519 aa20.67■□□□□ 0.9
CXCL12-207ENST00000488591 THRAP3Q9Y2W1 955 aaKnown RBP20.67■□□□□ 0.9
CXCL12-207ENST00000488591 KNSTRNQ9Y448 316 aa20.67■□□□□ 0.9
CXCL12-207ENST00000488591 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
CXCL12-207ENST00000488591 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
CXCL12-207ENST00000488591 CRB1P82279 1406 aa20.67■□□□□ 0.9
CXCL12-207ENST00000488591 AMPHP49418 695 aa20.66■□□□□ 0.9
CXCL12-207ENST00000488591 RGPD5Q99666 1765 aa20.66■□□□□ 0.9
CXCL12-207ENST00000488591 BARGINQ6ZT62 677 aa20.65■□□□□ 0.9
CXCL12-207ENST00000488591 IP6K1Q92551 441 aa20.65■□□□□ 0.9
CXCL12-207ENST00000488591 MAP3K19Q56UN5 1328 aa20.64■□□□□ 0.89
CXCL12-207ENST00000488591 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
CXCL12-207ENST00000488591 BLMP54132 1417 aaPredicted RBP20.63■□□□□ 0.89
CXCL12-207ENST00000488591 FBLN1P23142 703 aa20.63■□□□□ 0.89
CXCL12-207ENST00000488591 NSD2O96028 1365 aa20.62■□□□□ 0.89
CXCL12-207ENST00000488591 RRS1Q15050 365 aaKnown RBP20.62■□□□□ 0.89
CXCL12-207ENST00000488591 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
CXCL12-207ENST00000488591 ANKRD24Q8TF21 1146 aa20.62■□□□□ 0.89
CXCL12-207ENST00000488591 CARD10Q9BWT7 1032 aa20.61■□□□□ 0.89
CXCL12-207ENST00000488591 RTL1A6NKG5 1358 aa20.6■□□□□ 0.89
CXCL12-207ENST00000488591 ERBB3P21860 1342 aa20.6■□□□□ 0.89
CXCL12-207ENST00000488591 HOXC9P31274 260 aa20.6■□□□□ 0.89
CXCL12-207ENST00000488591 NLRP2Q9NX02 1062 aa20.6■□□□□ 0.89
CXCL12-207ENST00000488591 BRWD3Q6RI45 1802 aa20.6■□□□□ 0.89
CXCL12-207ENST00000488591 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
CXCL12-207ENST00000488591 ANKRD26Q9UPS8 1709 aa20.58■□□□□ 0.89
CXCL12-207ENST00000488591 THSD7AQ9UPZ6 1657 aa20.58■□□□□ 0.89
CXCL12-207ENST00000488591 MORC1Q86VD1 984 aa20.58■□□□□ 0.89
CXCL12-207ENST00000488591 UPF1Q92900 1129 aaKnown RBP eCLIP20.58■□□□□ 0.89
CXCL12-207ENST00000488591 CDCA7Q9BWT1 371 aaPredicted RBP20.58■□□□□ 0.89
CXCL12-207ENST00000488591 KIF24Q5T7B8 1368 aa20.58■□□□□ 0.88
CXCL12-207ENST00000488591 TNNT2P45379 298 aaPredicted RBP20.57■□□□□ 0.88
CXCL12-207ENST00000488591 PDE3BQ13370 1112 aa20.57■□□□□ 0.88
CXCL12-207ENST00000488591 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
CXCL12-207ENST00000488591 FLT4P35916 1363 aa20.55■□□□□ 0.88
CXCL12-207ENST00000488591 SMG6Q86US8 1419 aaKnown RBP20.54■□□□□ 0.88
CXCL12-207ENST00000488591 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
CXCL12-207ENST00000488591 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
CXCL12-207ENST00000488591 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
CXCL12-207ENST00000488591 MAP2P11137 1827 aaKnown RBP20.53■□□□□ 0.88
CXCL12-207ENST00000488591 DDB1Q16531 1140 aa20.53■□□□□ 0.88
CXCL12-207ENST00000488591 CCDC125Q86Z20 511 aa20.53■□□□□ 0.88
CXCL12-207ENST00000488591 INSRP06213 1382 aa20.53■□□□□ 0.88
CXCL12-207ENST00000488591 FAM208AQ9UK61 1670 aaKnown RBP20.53■□□□□ 0.88
CXCL12-207ENST00000488591 HSP90AB2PQ58FF8 381 aa20.52■□□□□ 0.88
CXCL12-207ENST00000488591 POLKQ9UBT6 870 aa20.52■□□□□ 0.88
CXCL12-207ENST00000488591 PARP4Q9UKK3 1724 aaKnown RBP20.51■□□□□ 0.87
CXCL12-207ENST00000488591 EXOC5O00471 708 aa20.5■□□□□ 0.87
CXCL12-207ENST00000488591 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
CXCL12-207ENST00000488591 WNK3Q9BYP7 1800 aa20.49■□□□□ 0.87
CXCL12-207ENST00000488591 IL2RBP14784 551 aa20.49■□□□□ 0.87
CXCL12-207ENST00000488591 CC2D1BQ5T0F9 858 aaKnown RBP20.49■□□□□ 0.87
CXCL12-207ENST00000488591 FAM196AQ6ZSG2 479 aa20.49■□□□□ 0.87
CXCL12-207ENST00000488591 SF3B2Q13435 895 aaKnown RBP20.48■□□□□ 0.87
CXCL12-207ENST00000488591 FAM182BQ5T319 152 aa20.48■□□□□ 0.87
CXCL12-207ENST00000488591 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
CXCL12-207ENST00000488591 DISP2A7MBM2 1401 aa20.46■□□□□ 0.87
CXCL12-207ENST00000488591 MSH5O43196 834 aa20.46■□□□□ 0.87
CXCL12-207ENST00000488591 NBPF6Q5VWK0 638 aa20.46■□□□□ 0.87
CXCL12-207ENST00000488591 NBPF4Q96M43 638 aa20.46■□□□□ 0.87
CXCL12-207ENST00000488591 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
CXCL12-207ENST00000488591 LRRC37A3O60309 1634 aa20.45■□□□□ 0.86
CXCL12-207ENST00000488591 RGPD2P0DJD1 1756 aa20.43■□□□□ 0.86
CXCL12-207ENST00000488591 RAPGEF4Q8WZA2 1011 aa20.42■□□□□ 0.86
CXCL12-207ENST00000488591 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
CXCL12-207ENST00000488591 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
CXCL12-207ENST00000488591 TNS2Q63HR2 1409 aa20.4■□□□□ 0.86
CXCL12-207ENST00000488591 MARCH10Q8NA82 808 aaPredicted RBP20.4■□□□□ 0.86
CXCL12-207ENST00000488591 EP400Q96L91 3159 aa20.4■□□□□ 0.86
CXCL12-207ENST00000488591 TRIM37O94972 964 aa20.39■□□□□ 0.85
CXCL12-207ENST00000488591 TATP17735 454 aaPredicted RBP20.39■□□□□ 0.85
CXCL12-207ENST00000488591 MTHFSP49914 203 aa20.39■□□□□ 0.85
CXCL12-207ENST00000488591 EIF4A2Q14240 407 aaKnown RBP20.39■□□□□ 0.85
CXCL12-207ENST00000488591 BAG6P46379 1132 aa20.38■□□□□ 0.85
CXCL12-207ENST00000488591 EYA1Q99502 592 aa20.38■□□□□ 0.85
CXCL12-207ENST00000488591 RGPD1P0DJD0 1748 aa20.38■□□□□ 0.85
CXCL12-207ENST00000488591 ZCRB1Q8TBF4 217 aaKnown RBP20.37■□□□□ 0.85
CXCL12-207ENST00000488591 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
CXCL12-207ENST00000488591 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
CXCL12-207ENST00000488591 MEGF6O75095 1541 aa20.34■□□□□ 0.85
CXCL12-207ENST00000488591 BCL9O00512 1426 aa20.34■□□□□ 0.85
CXCL12-207ENST00000488591 APBA3O96018 575 aa20.33■□□□□ 0.85
CXCL12-207ENST00000488591 DEFB132Q7Z7B7 95 aa20.33■□□□□ 0.85
CXCL12-207ENST00000488591 NCAPD2Q15021 1401 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms