RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 NLRP6P59044 892 aa17.05■□□□□ 0.32
COL1A2-210ENST00000488298 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
COL1A2-210ENST00000488298 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
COL1A2-210ENST00000488298 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
COL1A2-210ENST00000488298 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
COL1A2-210ENST00000488298 USP6P35125 1406 aa17.04■□□□□ 0.32
COL1A2-210ENST00000488298 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
COL1A2-210ENST00000488298 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
COL1A2-210ENST00000488298 C11orf95C9JLR9 678 aaPredicted RBP17.01■□□□□ 0.31
COL1A2-210ENST00000488298 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
COL1A2-210ENST00000488298 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
COL1A2-210ENST00000488298 COL5A2P05997 1499 aaPredicted RBP17■□□□□ 0.31
COL1A2-210ENST00000488298 CRB1P82279 1406 aa16.99■□□□□ 0.31
COL1A2-210ENST00000488298 MYOM1P52179 1685 aa16.98■□□□□ 0.31
COL1A2-210ENST00000488298 TOM1L2Q6ZVM7 507 aa16.98■□□□□ 0.31
COL1A2-210ENST00000488298 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
COL1A2-210ENST00000488298 SLIT3O75094 1523 aa16.97■□□□□ 0.31
COL1A2-210ENST00000488298 DDB1Q16531 1140 aa16.97■□□□□ 0.31
COL1A2-210ENST00000488298 ZNF692Q9BU19 519 aaPredicted RBP16.97■□□□□ 0.31
COL1A2-210ENST00000488298 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.31
COL1A2-210ENST00000488298 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
COL1A2-210ENST00000488298 AXIN2Q9Y2T1 843 aa16.95■□□□□ 0.3
COL1A2-210ENST00000488298 PLSCR1O15162 318 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 KCNH5Q8NCM2 988 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 COL18A1P39060 1754 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 OVOS2A0A0G2JMS6 1433 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
COL1A2-210ENST00000488298 SLC4A2P04920 1241 aa16.93■□□□□ 0.3
COL1A2-210ENST00000488298 ARHGEF25Q86VW2 580 aa16.93■□□□□ 0.3
COL1A2-210ENST00000488298 SPON1Q9HCB6 807 aa16.93■□□□□ 0.3
COL1A2-210ENST00000488298 WDR17Q8IZU2 1322 aa16.93■□□□□ 0.3
COL1A2-210ENST00000488298 PARP4Q9UKK3 1724 aaKnown RBP16.93■□□□□ 0.3
COL1A2-210ENST00000488298 A0A1W2PP64 1363 aa16.92■□□□□ 0.3
COL1A2-210ENST00000488298 KTN1Q86UP2 1357 aaKnown RBP16.92■□□□□ 0.3
COL1A2-210ENST00000488298 NINLQ9Y2I6 1382 aa16.92■□□□□ 0.3
COL1A2-210ENST00000488298 SOX12O15370 315 aa16.92■□□□□ 0.3
COL1A2-210ENST00000488298 KCNQ2O43526 872 aa16.92■□□□□ 0.3
COL1A2-210ENST00000488298 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
COL1A2-210ENST00000488298 BCL11BQ9C0K0 894 aaPredicted RBP16.92■□□□□ 0.3
COL1A2-210ENST00000488298 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
COL1A2-210ENST00000488298 RREB1Q92766 1687 aa16.91■□□□□ 0.3
COL1A2-210ENST00000488298 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
COL1A2-210ENST00000488298 TTC21AQ8NDW8 1320 aa16.91■□□□□ 0.3
COL1A2-210ENST00000488298 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
COL1A2-210ENST00000488298 TMF1P82094 1093 aa16.9■□□□□ 0.3
COL1A2-210ENST00000488298 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
COL1A2-210ENST00000488298 CARD10Q9BWT7 1032 aa16.9■□□□□ 0.3
COL1A2-210ENST00000488298 NFAT5O94916 1531 aa16.9■□□□□ 0.3
COL1A2-210ENST00000488298 NUP188Q5SRE5 1749 aa16.9■□□□□ 0.3
COL1A2-210ENST00000488298 EDC4Q6P2E9 1401 aaKnown RBP16.89■□□□□ 0.29
COL1A2-210ENST00000488298 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
COL1A2-210ENST00000488298 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
COL1A2-210ENST00000488298 EXOC5O00471 708 aa16.88■□□□□ 0.29
COL1A2-210ENST00000488298 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL1A2-210ENST00000488298 TMC1Q8TDI8 760 aa16.87■□□□□ 0.29
COL1A2-210ENST00000488298 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
COL1A2-210ENST00000488298 RGPD5Q99666 1765 aa16.87■□□□□ 0.29
COL1A2-210ENST00000488298 PROM2Q8N271 834 aa16.86■□□□□ 0.29
COL1A2-210ENST00000488298 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
COL1A2-210ENST00000488298 PEAK1Q9H792 1746 aa16.86■□□□□ 0.29
COL1A2-210ENST00000488298 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
COL1A2-210ENST00000488298 BCL9O00512 1426 aa16.85■□□□□ 0.29
COL1A2-210ENST00000488298 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
COL1A2-210ENST00000488298 YY1P25490 414 aa16.84■□□□□ 0.29
COL1A2-210ENST00000488298 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
COL1A2-210ENST00000488298 NME9Q86XW9 330 aa16.84■□□□□ 0.29
COL1A2-210ENST00000488298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL1A2-210ENST00000488298 LTN1O94822 1766 aa16.83■□□□□ 0.28
COL1A2-210ENST00000488298 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
COL1A2-210ENST00000488298 CCDC7Q96M83 1385 aa16.83■□□□□ 0.28
COL1A2-210ENST00000488298 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
COL1A2-210ENST00000488298 TXNRD1Q16881 649 aa16.82■□□□□ 0.28
COL1A2-210ENST00000488298 SBF2Q86WG5 1849 aa16.82■□□□□ 0.28
COL1A2-210ENST00000488298 CARD14Q9BXL6 1004 aa16.81■□□□□ 0.28
COL1A2-210ENST00000488298 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
COL1A2-210ENST00000488298 ABCC6O95255 1503 aa16.8■□□□□ 0.28
COL1A2-210ENST00000488298 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
COL1A2-210ENST00000488298 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
COL1A2-210ENST00000488298 STK32BQ9NY57 414 aa16.8■□□□□ 0.28
COL1A2-210ENST00000488298 RGPD3A6NKT7 1758 aaPredicted RBP16.79■□□□□ 0.28
COL1A2-210ENST00000488298 RGPD4Q7Z3J3 1758 aa16.79■□□□□ 0.28
COL1A2-210ENST00000488298 SLC15A2Q16348 729 aa16.78■□□□□ 0.28
COL1A2-210ENST00000488298 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
COL1A2-210ENST00000488298 ATF5Q9Y2D1 282 aaPredicted RBP16.78■□□□□ 0.28
COL1A2-210ENST00000488298 ERBB3P21860 1342 aa16.77■□□□□ 0.28
COL1A2-210ENST00000488298 FYB1O15117 783 aa16.77■□□□□ 0.28
COL1A2-210ENST00000488298 IL2RBP14784 551 aa16.77■□□□□ 0.28
COL1A2-210ENST00000488298 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
COL1A2-210ENST00000488298 WNK3Q9BYP7 1800 aa16.76■□□□□ 0.27
COL1A2-210ENST00000488298 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
COL1A2-210ENST00000488298 PTGER2P43116 358 aa16.75■□□□□ 0.27
COL1A2-210ENST00000488298 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
COL1A2-210ENST00000488298 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
COL1A2-210ENST00000488298 NSD3Q9BZ95 1437 aa16.73■□□□□ 0.27
COL1A2-210ENST00000488298 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
COL1A2-210ENST00000488298 KIF7Q2M1P5 1343 aa16.72■□□□□ 0.27
COL1A2-210ENST00000488298 ZBTB22O15209 634 aa16.72■□□□□ 0.27
COL1A2-210ENST00000488298 MTFR1LQ9H019 292 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms