RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
NKRF-203ENST00000487600 ZBTB33Q86T24 672 aa12.87□□□□□ -0.35
NKRF-203ENST00000487600 PNMA1Q8ND90 353 aa12.87□□□□□ -0.35
NKRF-203ENST00000487600 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
NKRF-203ENST00000487600 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
NKRF-203ENST00000487600 ZSCAN1Q8NBB4 408 aa12.86□□□□□ -0.35
NKRF-203ENST00000487600 LRRN4Q8WUT4 740 aa12.86□□□□□ -0.35
NKRF-203ENST00000487600 GPBP1L1Q9HC44 474 aaPredicted RBP12.85□□□□□ -0.35
NKRF-203ENST00000487600 PTK2Q05397 1052 aa12.84□□□□□ -0.35
NKRF-203ENST00000487600 PPP2R2DQ66LE6 453 aa12.84□□□□□ -0.35
NKRF-203ENST00000487600 AP1G2O75843 785 aa12.83□□□□□ -0.36
NKRF-203ENST00000487600 DHX9Q08211 1270 aaKnown RBP12.83□□□□□ -0.36
NKRF-203ENST00000487600 PROCA1Q8NCQ7 364 aaPredicted RBP12.83□□□□□ -0.36
NKRF-203ENST00000487600 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
NKRF-203ENST00000487600 FAM117AQ9C073 453 aa12.83□□□□□ -0.36
NKRF-203ENST00000487600 ERBB4Q15303 1308 aa12.83□□□□□ -0.36
NKRF-203ENST00000487600 NR6A1Q15406 480 aa12.82□□□□□ -0.36
NKRF-203ENST00000487600 PPP1R26Q5T8A7 1209 aaPredicted RBP12.81□□□□□ -0.36
NKRF-203ENST00000487600 KCTD15Q96SI1 283 aaPredicted RBP12.81□□□□□ -0.36
NKRF-203ENST00000487600 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
NKRF-203ENST00000487600 GPSM3Q9Y4H4 160 aa12.8□□□□□ -0.36
NKRF-203ENST00000487600 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
NKRF-203ENST00000487600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.78□□□□□ -0.36
NKRF-203ENST00000487600 TTLL8A6PVC2 850 aa12.77□□□□□ -0.37
NKRF-203ENST00000487600 PPFIA3O75145 1194 aa12.77□□□□□ -0.37
NKRF-203ENST00000487600 DNMT3LQ9UJW3 386 aa12.77□□□□□ -0.37
NKRF-203ENST00000487600 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
NKRF-203ENST00000487600 CBLBQ13191 982 aa12.74□□□□□ -0.37
NKRF-203ENST00000487600 Q6ZVU0 165 aa12.74□□□□□ -0.37
NKRF-203ENST00000487600 ADAM32Q8TC27 787 aa12.73□□□□□ -0.37
NKRF-203ENST00000487600 USP17L8P0C7I0 530 aa12.72□□□□□ -0.37
NKRF-203ENST00000487600 FBXO31Q5XUX0 539 aaPredicted RBP12.72□□□□□ -0.37
NKRF-203ENST00000487600 SPINT1O43278 529 aa12.71□□□□□ -0.37
NKRF-203ENST00000487600 LORP23490 312 aaPredicted RBP12.71□□□□□ -0.37
NKRF-203ENST00000487600 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
NKRF-203ENST00000487600 DZIP3Q86Y13 1208 aaKnown RBP12.71□□□□□ -0.37
NKRF-203ENST00000487600 TRIM52Q96A61 297 aa12.71□□□□□ -0.37
NKRF-203ENST00000487600 FIGNL2A6NMB9 653 aa12.7□□□□□ -0.38
NKRF-203ENST00000487600 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
NKRF-203ENST00000487600 RFC5P40937 340 aa12.68□□□□□ -0.38
NKRF-203ENST00000487600 PTSQ03393 145 aa12.67□□□□□ -0.38
NKRF-203ENST00000487600 RAB15P59190 212 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 RELBQ01201 579 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 TMEM259Q4ZIN3 620 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 EPS8L1Q8TE68 723 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 GOPCQ9HD26 462 aa12.66□□□□□ -0.38
NKRF-203ENST00000487600 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
NKRF-203ENST00000487600 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
NKRF-203ENST00000487600 POLMQ9NP87 494 aaPredicted RBP12.64□□□□□ -0.39
NKRF-203ENST00000487600 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
NKRF-203ENST00000487600 INSM2Q96T92 566 aaPredicted RBP12.61□□□□□ -0.39
NKRF-203ENST00000487600 TMPRSS4Q9NRS4 437 aa12.61□□□□□ -0.39
NKRF-203ENST00000487600 ADH1AP07327 375 aa12.6□□□□□ -0.39
NKRF-203ENST00000487600 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
NKRF-203ENST00000487600 ERVH48-1M5A8F1 160 aa12.59□□□□□ -0.39
NKRF-203ENST00000487600 CTSOP43234 321 aaPredicted RBP12.59□□□□□ -0.39
NKRF-203ENST00000487600 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
NKRF-203ENST00000487600 SEPT12Q8IYM1 358 aa12.59□□□□□ -0.39
NKRF-203ENST00000487600 ZNF395Q9H8N7 513 aaPredicted RBP12.59□□□□□ -0.39
NKRF-203ENST00000487600 SLC35F4A4IF30 521 aa12.58□□□□□ -0.4
NKRF-203ENST00000487600 NANOS1Q8WY41 292 aaKnown RBP12.58□□□□□ -0.4
NKRF-203ENST00000487600 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
NKRF-203ENST00000487600 CNTNAP3Q9BZ76 1288 aa12.57□□□□□ -0.4
NKRF-203ENST00000487600 ESPNB1AK53 854 aa12.56□□□□□ -0.4
NKRF-203ENST00000487600 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
NKRF-203ENST00000487600 PTGIRP43119 386 aa12.55□□□□□ -0.4
NKRF-203ENST00000487600 GPR161Q8N6U8 529 aaKnown RBP12.55□□□□□ -0.4
NKRF-203ENST00000487600 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
NKRF-203ENST00000487600 TRIM34Q9BYJ4 488 aa12.55□□□□□ -0.4
NKRF-203ENST00000487600 CDC14CA4D256 554 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 ITGA6P23229 1130 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 SV2AQ7L0J3 742 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 CCDC125Q86Z20 511 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
NKRF-203ENST00000487600 PCDHB9Q9Y5E1 797 aa12.54□□□□□ -0.4
NKRF-203ENST00000487600 LILRA1O75019 489 aa12.53□□□□□ -0.4
NKRF-203ENST00000487600 ZNF592Q92610 1267 aa12.53□□□□□ -0.4
NKRF-203ENST00000487600 ADD1P35611 737 aaKnown RBP12.52□□□□□ -0.41
NKRF-203ENST00000487600 VWA5B2Q8N398 1253 aa12.52□□□□□ -0.41
NKRF-203ENST00000487600 LYSMD3Q7Z3D4 306 aa12.51□□□□□ -0.41
NKRF-203ENST00000487600 CYLDQ9NQC7 956 aa12.51□□□□□ -0.41
NKRF-203ENST00000487600 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
NKRF-203ENST00000487600 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
NKRF-203ENST00000487600 RNF20Q5VTR2 975 aa12.5□□□□□ -0.41
NKRF-203ENST00000487600 KRT76Q01546 638 aa12.49□□□□□ -0.41
NKRF-203ENST00000487600 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
NKRF-203ENST00000487600 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
NKRF-203ENST00000487600 FOXD4L5Q5VV16 416 aaPredicted RBP12.47□□□□□ -0.41
NKRF-203ENST00000487600 RNF225M0QZC1 329 aaPredicted RBP12.46□□□□□ -0.41
NKRF-203ENST00000487600 APBB1O00213 710 aa12.46□□□□□ -0.41
NKRF-203ENST00000487600 FBXO45P0C2W1 286 aa12.46□□□□□ -0.41
NKRF-203ENST00000487600 ESF1Q9H501 851 aaKnown RBP12.46□□□□□ -0.41
NKRF-203ENST00000487600 RNF144AP50876 292 aaPredicted RBP12.45□□□□□ -0.42
NKRF-203ENST00000487600 SVOPQ8N4V2 548 aa12.45□□□□□ -0.42
NKRF-203ENST00000487600 GJD4Q96KN9 370 aaPredicted RBP12.45□□□□□ -0.42
NKRF-203ENST00000487600 KDF1Q8NAX2 398 aaPredicted RBP12.44□□□□□ -0.42
NKRF-203ENST00000487600 BANK1Q8NDB2 785 aa12.44□□□□□ -0.42
NKRF-203ENST00000487600 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms