RNA–Protein interactions for RNA: ENST00000487600.1

NKRF-203, Transcript of NFKB repressing factor, humanhuman

TSL 5

Gene NKRF, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-203ENST00000487600 AEBP2Q6ZN18 517 aaPredicted RBP36.84■■■■□ 3.49
NKRF-203ENST00000487600 CHIC1Q5VXU3 224 aa35.27■■■■□ 3.24
NKRF-203ENST00000487600 SENP3Q9H4L4 574 aaPredicted RBP31.59■■■□□ 2.65
NKRF-203ENST00000487600 PHF23Q9BUL5 403 aaPredicted RBP31.14■■■□□ 2.58
NKRF-203ENST00000487600 FOXD1Q16676 465 aa29.31■■■□□ 2.28
NKRF-203ENST00000487600 PLPPR3Q6T4P5 718 aa28.34■■■□□ 2.13
NKRF-203ENST00000487600 PIAS4Q8N2W9 510 aaPredicted RBP27.52■■■□□ 2
NKRF-203ENST00000487600 MSH5O43196 834 aa27.51■■□□□ 1.99
NKRF-203ENST00000487600 PPP6R1Q9UPN7 881 aa27.47■■□□□ 1.99
NKRF-203ENST00000487600 ADRA2BP18089 450 aa27.45■■□□□ 1.98
NKRF-203ENST00000487600 POTEDQ86YR6 584 aa26.91■■□□□ 1.9
NKRF-203ENST00000487600 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.64
NKRF-203ENST00000487600 MAPK8IP2Q13387 824 aaPredicted RBP25.13■■□□□ 1.61
NKRF-203ENST00000487600 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
NKRF-203ENST00000487600 PPP4R3CPQ6ZMV5 832 aa24.82■■□□□ 1.56
NKRF-203ENST00000487600 CNKSR2Q8WXI2 1034 aa24.35■■□□□ 1.49
NKRF-203ENST00000487600 HOXD11P31277 338 aaPredicted RBP24.15■■□□□ 1.46
NKRF-203ENST00000487600 DCAF8L1A6NGE4 600 aa24.1■■□□□ 1.45
NKRF-203ENST00000487600 RNF216Q9NWF9 866 aaPredicted RBP24.06■■□□□ 1.44
NKRF-203ENST00000487600 NCBP3Q53F19 620 aaKnown RBP24.05■■□□□ 1.44
NKRF-203ENST00000487600 NPM3O75607 178 aaKnown RBP23.54■■□□□ 1.36
NKRF-203ENST00000487600 CACNB1Q02641 598 aaPredicted RBP23.51■■□□□ 1.35
NKRF-203ENST00000487600 RNF39Q9H2S5 420 aa23.38■■□□□ 1.33
NKRF-203ENST00000487600 DNAJC5BQ9UF47 199 aa23.34■■□□□ 1.33
NKRF-203ENST00000487600 KCNA4P22459 653 aa23.21■■□□□ 1.31
NKRF-203ENST00000487600 C1QBPQ07021 282 aaKnown RBP23.14■■□□□ 1.29
NKRF-203ENST00000487600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
NKRF-203ENST00000487600 U3KPZ7 1027 aaPredicted RBP22.53■■□□□ 1.2
NKRF-203ENST00000487600 SLC4A2P04920 1241 aa22.37■■□□□ 1.17
NKRF-203ENST00000487600 CAPN15O75808 1086 aa22.23■■□□□ 1.15
NKRF-203ENST00000487600 APLP2Q06481 763 aa22.17■■□□□ 1.14
NKRF-203ENST00000487600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.15■■□□□ 1.14
NKRF-203ENST00000487600 HNRNPUL2Q1KMD3 747 aaKnown RBP22.15■■□□□ 1.14
NKRF-203ENST00000487600 SPINK5Q9NQ38 1064 aaPredicted RBP22.14■■□□□ 1.13
NKRF-203ENST00000487600 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
NKRF-203ENST00000487600 SAMD1Q6SPF0 538 aaPredicted RBP21.99■■□□□ 1.11
NKRF-203ENST00000487600 DSG3P32926 999 aa21.95■■□□□ 1.1
NKRF-203ENST00000487600 ZNF219Q9P2Y4 722 aaPredicted RBP21.9■■□□□ 1.1
NKRF-203ENST00000487600 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.09
NKRF-203ENST00000487600 MYCNP04198 464 aaPredicted RBP21.85■■□□□ 1.09
NKRF-203ENST00000487600 FOXD4L1Q9NU39 408 aa21.7■■□□□ 1.06
NKRF-203ENST00000487600 ABCB7O75027 752 aa21.66■■□□□ 1.06
NKRF-203ENST00000487600 POLA2Q14181 598 aa21.31■■□□□ 1
NKRF-203ENST00000487600 ZBTB22O15209 634 aa21.26■□□□□ 0.99
NKRF-203ENST00000487600 ATF5Q9Y2D1 282 aaPredicted RBP21.18■□□□□ 0.98
NKRF-203ENST00000487600 RBM42Q9BTD8 480 aaKnown RBP21.09■□□□□ 0.97
NKRF-203ENST00000487600 ATXN8OSP0DMR3 200 aa21.05■□□□□ 0.96
NKRF-203ENST00000487600 POTEHQ6S545 545 aa21.04■□□□□ 0.96
NKRF-203ENST00000487600 ZBTB12Q9Y330 459 aaPredicted RBP21.02■□□□□ 0.96
NKRF-203ENST00000487600 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
NKRF-203ENST00000487600 AKT1S1Q96B36 256 aa20.59■□□□□ 0.89
NKRF-203ENST00000487600 FBLN2P98095 1184 aa20.58■□□□□ 0.89
NKRF-203ENST00000487600 CSRNP3Q8WYN3 585 aa20.5■□□□□ 0.87
NKRF-203ENST00000487600 CHRDL2Q6WN34 429 aa20.46■□□□□ 0.87
NKRF-203ENST00000487600 EHMT2Q96KQ7 1210 aa20.41■□□□□ 0.86
NKRF-203ENST00000487600 REM2Q8IYK8 340 aaPredicted RBP20.34■□□□□ 0.85
NKRF-203ENST00000487600 SPDYE2BA6NHP3 402 aa20.31■□□□□ 0.84
NKRF-203ENST00000487600 SPDYE6P0CI01 402 aa20.31■□□□□ 0.84
NKRF-203ENST00000487600 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
NKRF-203ENST00000487600 MKRN4PQ13434 485 aaPredicted RBP20.22■□□□□ 0.83
NKRF-203ENST00000487600 PITPNM1O00562 1244 aa20.1■□□□□ 0.81
NKRF-203ENST00000487600 ZNF692Q9BU19 519 aaPredicted RBP20.1■□□□□ 0.81
NKRF-203ENST00000487600 SSUH2Q9Y2M2 353 aa19.98■□□□□ 0.79
NKRF-203ENST00000487600 PIP4P2Q8N4L2 257 aa19.97■□□□□ 0.79
NKRF-203ENST00000487600 SPDYE1Q8NFV5 336 aaPredicted RBP19.95■□□□□ 0.78
NKRF-203ENST00000487600 FXR2P51116 673 aaKnown RBP eCLIP19.9■□□□□ 0.78
NKRF-203ENST00000487600 CLEC11AQ9Y240 323 aa19.89■□□□□ 0.77
NKRF-203ENST00000487600 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
NKRF-203ENST00000487600 HAX1O00165 279 aa19.66■□□□□ 0.74
NKRF-203ENST00000487600 SP7Q8TDD2 431 aaPredicted RBP19.65■□□□□ 0.74
NKRF-203ENST00000487600 PRKAR2AP13861 404 aaKnown RBP19.64■□□□□ 0.73
NKRF-203ENST00000487600 PRR29P0C7W0 189 aa19.59■□□□□ 0.73
NKRF-203ENST00000487600 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
NKRF-203ENST00000487600 EVX2Q03828 476 aa19.42■□□□□ 0.7
NKRF-203ENST00000487600 CHADLQ6NUI6 762 aa19.4■□□□□ 0.7
NKRF-203ENST00000487600 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
NKRF-203ENST00000487600 C19orf67A6NJJ6 358 aa19.25■□□□□ 0.67
NKRF-203ENST00000487600 FARP1Q9Y4F1 1045 aaPredicted RBP19.17■□□□□ 0.66
NKRF-203ENST00000487600 CD44P16070 742 aaKnown RBP19.04■□□□□ 0.64
NKRF-203ENST00000487600 CREBZFQ9NS37 354 aa19.04■□□□□ 0.64
NKRF-203ENST00000487600 GABBR2O75899 941 aa18.93■□□□□ 0.62
NKRF-203ENST00000487600 PROM2Q8N271 834 aa18.93■□□□□ 0.62
NKRF-203ENST00000487600 NPM1P06748 294 aaKnown RBP eCLIP18.87■□□□□ 0.61
NKRF-203ENST00000487600 CLCN6P51797 869 aa18.85■□□□□ 0.61
NKRF-203ENST00000487600 PAK3O75914 559 aaPredicted RBP18.81■□□□□ 0.6
NKRF-203ENST00000487600 ZRANB1Q9UGI0 708 aa18.81■□□□□ 0.6
NKRF-203ENST00000487600 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
NKRF-203ENST00000487600 ZNF579Q8NAF0 562 aaKnown RBP18.72■□□□□ 0.59
NKRF-203ENST00000487600 MNX1P50219 401 aaPredicted RBP18.68■□□□□ 0.58
NKRF-203ENST00000487600 FKBP8Q14318 412 aa18.68■□□□□ 0.58
NKRF-203ENST00000487600 MIER1Q8N108 512 aa18.63■□□□□ 0.57
NKRF-203ENST00000487600 DCBLD2Q96PD2 775 aa18.57■□□□□ 0.56
NKRF-203ENST00000487600 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
NKRF-203ENST00000487600 PLCD3Q8N3E9 789 aa18.52■□□□□ 0.56
NKRF-203ENST00000487600 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
NKRF-203ENST00000487600 GALR2O43603 387 aaPredicted RBP18.44■□□□□ 0.54
NKRF-203ENST00000487600 TSPYL2Q9H2G4 693 aaPredicted RBP18.44■□□□□ 0.54
NKRF-203ENST00000487600 LHX8Q68G74 356 aa18.43■□□□□ 0.54
NKRF-203ENST00000487600 ZBTB47Q9UFB7 747 aaPredicted RBP18.43■□□□□ 0.54
NKRF-203ENST00000487600 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms