RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
HOXA9-204ENST00000487384 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
HOXA9-204ENST00000487384 ZBTB7AO95365 584 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 DDB1Q16531 1140 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 NBPF1Q3BBV0 1214 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 TOM1L2Q6ZVM7 507 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 KIAA1210Q9ULL0 1709 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 MYOM1P52179 1685 aa12.22□□□□□ -0.45
HOXA9-204ENST00000487384 COL18A1P39060 1754 aa12.21□□□□□ -0.45
HOXA9-204ENST00000487384 PLSCR1O15162 318 aa12.21□□□□□ -0.45
HOXA9-204ENST00000487384 NLRP6P59044 892 aa12.21□□□□□ -0.45
HOXA9-204ENST00000487384 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
HOXA9-204ENST00000487384 QRICH2Q9H0J4 1663 aa12.2□□□□□ -0.46
HOXA9-204ENST00000487384 CHD4Q14839 1912 aa12.2□□□□□ -0.46
HOXA9-204ENST00000487384 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
HOXA9-204ENST00000487384 PROM2Q8N271 834 aa12.2□□□□□ -0.46
HOXA9-204ENST00000487384 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
HOXA9-204ENST00000487384 PIK3C2AO00443 1686 aa12.19□□□□□ -0.46
HOXA9-204ENST00000487384 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
HOXA9-204ENST00000487384 CABP1Q9NZU7 370 aa12.19□□□□□ -0.46
HOXA9-204ENST00000487384 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
HOXA9-204ENST00000487384 AATKQ6ZMQ8 1374 aa12.18□□□□□ -0.46
HOXA9-204ENST00000487384 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
HOXA9-204ENST00000487384 SLIT3O75094 1523 aa12.18□□□□□ -0.46
HOXA9-204ENST00000487384 SOX12O15370 315 aa12.18□□□□□ -0.46
HOXA9-204ENST00000487384 USP6P35125 1406 aa12.18□□□□□ -0.46
HOXA9-204ENST00000487384 PTGER2P43116 358 aa12.17□□□□□ -0.46
HOXA9-204ENST00000487384 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
HOXA9-204ENST00000487384 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
HOXA9-204ENST00000487384 MAPK8IP2Q13387 824 aaPredicted RBP12.16□□□□□ -0.46
HOXA9-204ENST00000487384 ZNF784Q8NCA9 323 aaPredicted RBP12.16□□□□□ -0.46
HOXA9-204ENST00000487384 TXNRD1Q16881 649 aa12.15□□□□□ -0.46
HOXA9-204ENST00000487384 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
HOXA9-204ENST00000487384 STK32BQ9NY57 414 aa12.15□□□□□ -0.46
HOXA9-204ENST00000487384 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
HOXA9-204ENST00000487384 CPSF1Q10570 1443 aaKnown RBP12.14□□□□□ -0.47
HOXA9-204ENST00000487384 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
HOXA9-204ENST00000487384 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
HOXA9-204ENST00000487384 SYT17Q9BSW7 474 aa12.13□□□□□ -0.47
HOXA9-204ENST00000487384 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
HOXA9-204ENST00000487384 CEP350Q5VT06 3117 aa12.12□□□□□ -0.47
HOXA9-204ENST00000487384 EXOC5O00471 708 aa12.12□□□□□ -0.47
HOXA9-204ENST00000487384 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
HOXA9-204ENST00000487384 CARD10Q9BWT7 1032 aa12.12□□□□□ -0.47
HOXA9-204ENST00000487384 BCL9O00512 1426 aa12.11□□□□□ -0.47
HOXA9-204ENST00000487384 NHSQ6T4R5 1651 aa12.11□□□□□ -0.47
HOXA9-204ENST00000487384 BTAF1O14981 1849 aa12.11□□□□□ -0.47
HOXA9-204ENST00000487384 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
HOXA9-204ENST00000487384 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
HOXA9-204ENST00000487384 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
HOXA9-204ENST00000487384 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
HOXA9-204ENST00000487384 SENP3-EIF4A1A0A087X0R7 540 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 SGIP1Q9BQI5 828 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 NFAT5O94916 1531 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 LTN1O94822 1766 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 TNS2Q63HR2 1409 aa12.09□□□□□ -0.47
HOXA9-204ENST00000487384 ARXQ96QS3 562 aa12.08□□□□□ -0.48
HOXA9-204ENST00000487384 CCDC7Q96M83 1385 aa12.07□□□□□ -0.48
HOXA9-204ENST00000487384 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
HOXA9-204ENST00000487384 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
HOXA9-204ENST00000487384 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
HOXA9-204ENST00000487384 C1QTNF8P60827 252 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.06□□□□□ -0.48
HOXA9-204ENST00000487384 NLRP2Q9NX02 1062 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 TTC21AQ8NDW8 1320 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 ABCC6O95255 1503 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
HOXA9-204ENST00000487384 KTN1Q86UP2 1357 aaKnown RBP12.05□□□□□ -0.48
HOXA9-204ENST00000487384 TUBGCP6Q96RT7 1819 aa12.05□□□□□ -0.48
HOXA9-204ENST00000487384 GPR162Q16538 588 aa12.05□□□□□ -0.48
HOXA9-204ENST00000487384 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
HOXA9-204ENST00000487384 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
HOXA9-204ENST00000487384 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
HOXA9-204ENST00000487384 IL2RBP14784 551 aa12.03□□□□□ -0.48
HOXA9-204ENST00000487384 ERBB3P21860 1342 aa12.03□□□□□ -0.48
HOXA9-204ENST00000487384 KCNQ4P56696 695 aa12.02□□□□□ -0.49
HOXA9-204ENST00000487384 NME9Q86XW9 330 aa12.02□□□□□ -0.49
HOXA9-204ENST00000487384 QSER1Q2KHR3 1735 aa12.02□□□□□ -0.49
HOXA9-204ENST00000487384 ROCK2O75116 1388 aaKnown RBP12.02□□□□□ -0.49
HOXA9-204ENST00000487384 ANKRD24Q8TF21 1146 aa12.01□□□□□ -0.49
HOXA9-204ENST00000487384 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
HOXA9-204ENST00000487384 USP54Q70EL1 1684 aa12□□□□□ -0.49
HOXA9-204ENST00000487384 DDX54Q8TDD1 881 aaKnown RBP12□□□□□ -0.49
HOXA9-204ENST00000487384 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
HOXA9-204ENST00000487384 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
HOXA9-204ENST00000487384 GIGYF1O75420 1035 aaPredicted RBP11.99□□□□□ -0.49
HOXA9-204ENST00000487384 POLD1P28340 1107 aa11.99□□□□□ -0.49
HOXA9-204ENST00000487384 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
HOXA9-204ENST00000487384 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
HOXA9-204ENST00000487384 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
HOXA9-204ENST00000487384 LTV1Q96GA3 475 aaPredicted RBP11.99□□□□□ -0.49
HOXA9-204ENST00000487384 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
HOXA9-204ENST00000487384 DOT1LQ8TEK3 1739 aa11.99□□□□□ -0.49
HOXA9-204ENST00000487384 USP31Q70CQ4 1352 aa11.98□□□□□ -0.49
HOXA9-204ENST00000487384 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
HOXA9-204ENST00000487384 NEUROD1Q13562 356 aa11.98□□□□□ -0.49
HOXA9-204ENST00000487384 NLGN2Q8NFZ4 835 aa11.98□□□□□ -0.49
HOXA9-204ENST00000487384 TFCP2L1Q9NZI6 479 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms