RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 CGNL1Q0VF96 1302 aa17.45■□□□□ 0.38
ECHDC2-213ENST00000487040 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
ECHDC2-213ENST00000487040 CRB1P82279 1406 aa17.44■□□□□ 0.38
ECHDC2-213ENST00000487040 KIF7Q2M1P5 1343 aa17.44■□□□□ 0.38
ECHDC2-213ENST00000487040 LTN1O94822 1766 aa17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 GGNBP2Q9H3C7 697 aa17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 AXIN2Q9Y2T1 843 aa17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 THRAP3Q9Y2W1 955 aaKnown RBP17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 WDR17Q8IZU2 1322 aa17.43■□□□□ 0.38
ECHDC2-213ENST00000487040 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
ECHDC2-213ENST00000487040 PANK3Q9H999 370 aa17.42■□□□□ 0.38
ECHDC2-213ENST00000487040 BLMP54132 1417 aaPredicted RBP17.41■□□□□ 0.38
ECHDC2-213ENST00000487040 A0A0G2JS52 829 aa17.41■□□□□ 0.38
ECHDC2-213ENST00000487040 MYT1Q01538 1121 aa17.41■□□□□ 0.38
ECHDC2-213ENST00000487040 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
ECHDC2-213ENST00000487040 THSD7AQ9UPZ6 1657 aa17.41■□□□□ 0.38
ECHDC2-213ENST00000487040 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
ECHDC2-213ENST00000487040 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
ECHDC2-213ENST00000487040 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
ECHDC2-213ENST00000487040 IP6K1Q92551 441 aa17.39■□□□□ 0.37
ECHDC2-213ENST00000487040 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
ECHDC2-213ENST00000487040 NSD2O96028 1365 aa17.39■□□□□ 0.37
ECHDC2-213ENST00000487040 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 UPF1Q92900 1129 aaKnown RBP eCLIP17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 ERBB3P21860 1342 aa17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 MAP3K19Q56UN5 1328 aa17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 CCDC7Q96M83 1385 aa17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
ECHDC2-213ENST00000487040 BRWD3Q6RI45 1802 aa17.37■□□□□ 0.37
ECHDC2-213ENST00000487040 CARD10Q9BWT7 1032 aa17.37■□□□□ 0.37
ECHDC2-213ENST00000487040 KIF24Q5T7B8 1368 aa17.37■□□□□ 0.37
ECHDC2-213ENST00000487040 AMPHP49418 695 aa17.36■□□□□ 0.37
ECHDC2-213ENST00000487040 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
ECHDC2-213ENST00000487040 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
ECHDC2-213ENST00000487040 HOXC9P31274 260 aa17.35■□□□□ 0.37
ECHDC2-213ENST00000487040 ANKRD24Q8TF21 1146 aa17.35■□□□□ 0.37
ECHDC2-213ENST00000487040 KNSTRNQ9Y448 316 aa17.35■□□□□ 0.37
ECHDC2-213ENST00000487040 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
ECHDC2-213ENST00000487040 CCDC125Q86Z20 511 aa17.34■□□□□ 0.37
ECHDC2-213ENST00000487040 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
ECHDC2-213ENST00000487040 PARP4Q9UKK3 1724 aaKnown RBP17.33■□□□□ 0.37
ECHDC2-213ENST00000487040 RRS1Q15050 365 aaKnown RBP17.33■□□□□ 0.36
ECHDC2-213ENST00000487040 FLT4P35916 1363 aa17.32■□□□□ 0.36
ECHDC2-213ENST00000487040 FBLN1P23142 703 aa17.32■□□□□ 0.36
ECHDC2-213ENST00000487040 ZEB1P37275 1124 aaPredicted RBP17.32■□□□□ 0.36
ECHDC2-213ENST00000487040 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
ECHDC2-213ENST00000487040 EP400Q96L91 3159 aa17.32■□□□□ 0.36
ECHDC2-213ENST00000487040 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
ECHDC2-213ENST00000487040 PDE3BQ13370 1112 aa17.31■□□□□ 0.36
ECHDC2-213ENST00000487040 SMG6Q86US8 1419 aaKnown RBP17.3■□□□□ 0.36
ECHDC2-213ENST00000487040 INSRP06213 1382 aa17.3■□□□□ 0.36
ECHDC2-213ENST00000487040 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
ECHDC2-213ENST00000487040 DDB1Q16531 1140 aa17.28■□□□□ 0.36
ECHDC2-213ENST00000487040 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
ECHDC2-213ENST00000487040 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
ECHDC2-213ENST00000487040 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
ECHDC2-213ENST00000487040 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
ECHDC2-213ENST00000487040 PEAK1Q9H792 1746 aa17.27■□□□□ 0.36
ECHDC2-213ENST00000487040 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
ECHDC2-213ENST00000487040 FAM196AQ6ZSG2 479 aa17.27■□□□□ 0.36
ECHDC2-213ENST00000487040 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
ECHDC2-213ENST00000487040 IL2RBP14784 551 aa17.26■□□□□ 0.35
ECHDC2-213ENST00000487040 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
ECHDC2-213ENST00000487040 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
ECHDC2-213ENST00000487040 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
ECHDC2-213ENST00000487040 SF3B2Q13435 895 aaKnown RBP17.25■□□□□ 0.35
ECHDC2-213ENST00000487040 MAP2P11137 1827 aaKnown RBP17.25■□□□□ 0.35
ECHDC2-213ENST00000487040 OVOS2A0A0G2JMS6 1433 aa17.24■□□□□ 0.35
ECHDC2-213ENST00000487040 TNS2Q63HR2 1409 aa17.24■□□□□ 0.35
ECHDC2-213ENST00000487040 EXOC5O00471 708 aa17.24■□□□□ 0.35
ECHDC2-213ENST00000487040 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-213ENST00000487040 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
ECHDC2-213ENST00000487040 FAM182BQ5T319 152 aa17.23■□□□□ 0.35
ECHDC2-213ENST00000487040 RGPD1P0DJD0 1748 aa17.22■□□□□ 0.35
ECHDC2-213ENST00000487040 BCL9O00512 1426 aa17.21■□□□□ 0.35
ECHDC2-213ENST00000487040 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
ECHDC2-213ENST00000487040 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
ECHDC2-213ENST00000487040 MARCH10Q8NA82 808 aaPredicted RBP17.19■□□□□ 0.34
ECHDC2-213ENST00000487040 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
ECHDC2-213ENST00000487040 BAG6P46379 1132 aa17.18■□□□□ 0.34
ECHDC2-213ENST00000487040 CC2D1BQ5T0F9 858 aaKnown RBP17.18■□□□□ 0.34
ECHDC2-213ENST00000487040 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
ECHDC2-213ENST00000487040 NCAPD2Q15021 1401 aa17.18■□□□□ 0.34
ECHDC2-213ENST00000487040 TNS1Q9HBL0 1735 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-213ENST00000487040 TRIM37O94972 964 aa17.16■□□□□ 0.34
ECHDC2-213ENST00000487040 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
ECHDC2-213ENST00000487040 MEGF6O75095 1541 aa17.16■□□□□ 0.34
ECHDC2-213ENST00000487040 TATP17735 454 aaPredicted RBP17.15■□□□□ 0.34
ECHDC2-213ENST00000487040 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
ECHDC2-213ENST00000487040 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
ECHDC2-213ENST00000487040 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
ECHDC2-213ENST00000487040 EYA1Q99502 592 aa17.14■□□□□ 0.33
ECHDC2-213ENST00000487040 DEFB132Q7Z7B7 95 aa17.13■□□□□ 0.33
ECHDC2-213ENST00000487040 PARD3Q8TEW0 1356 aa17.13■□□□□ 0.33
ECHDC2-213ENST00000487040 SBF2Q86WG5 1849 aa17.12■□□□□ 0.33
ECHDC2-213ENST00000487040 MTHFSP49914 203 aa17.12■□□□□ 0.33
ECHDC2-213ENST00000487040 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
ECHDC2-213ENST00000487040 IGSF1Q8N6C5 1336 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms