RNA–Protein interactions for RNA: ENST00000486829.1

ARHGEF3-211, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene ARHGEF3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-211ENST00000486829 ANP32CO43423 234 aa15.5■□□□□ 0.07
ARHGEF3-211ENST00000486829 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
ARHGEF3-211ENST00000486829 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
ARHGEF3-211ENST00000486829 ZC3H6P61129 1189 aaKnown RBP15.49■□□□□ 0.07
ARHGEF3-211ENST00000486829 VPS72Q15906 364 aa15.49■□□□□ 0.07
ARHGEF3-211ENST00000486829 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
ARHGEF3-211ENST00000486829 RTL1A6NKG5 1358 aa15.49■□□□□ 0.07
ARHGEF3-211ENST00000486829 KIAA0232Q92628 1395 aa15.49■□□□□ 0.07
ARHGEF3-211ENST00000486829 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
ARHGEF3-211ENST00000486829 PRDM11Q9NQV5 511 aa15.48■□□□□ 0.07
ARHGEF3-211ENST00000486829 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
ARHGEF3-211ENST00000486829 BRWD3Q6RI45 1802 aa15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 LTN1O94822 1766 aa15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 SOX12O15370 315 aa15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 TNNT2P45379 298 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 CNGB1Q14028 1251 aaPredicted RBP15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 CHRNA2Q15822 529 aa15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 CCDC9Q9Y3X0 531 aaKnown RBP15.47■□□□□ 0.07
ARHGEF3-211ENST00000486829 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
ARHGEF3-211ENST00000486829 MAP2P11137 1827 aaKnown RBP15.46■□□□□ 0.07
ARHGEF3-211ENST00000486829 FLT4P35916 1363 aa15.46■□□□□ 0.07
ARHGEF3-211ENST00000486829 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
ARHGEF3-211ENST00000486829 BLMP54132 1417 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 AMPHP49418 695 aa15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 RRS1Q15050 365 aaKnown RBP15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 POLKQ9UBT6 870 aa15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
ARHGEF3-211ENST00000486829 CAMTA1Q9Y6Y1 1673 aa15.42■□□□□ 0.06
ARHGEF3-211ENST00000486829 IP6K1Q92551 441 aa15.42■□□□□ 0.06
ARHGEF3-211ENST00000486829 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
ARHGEF3-211ENST00000486829 COL18A1P39060 1754 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 INSRP06213 1382 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 ONECUT3O60422 494 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 FBLN1P23142 703 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 HOXC9P31274 260 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 MTHFSP49914 203 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 SEPT12Q8IYM1 358 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 CFAP53Q96M91 514 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
ARHGEF3-211ENST00000486829 PEAK1Q9H792 1746 aa15.4■□□□□ 0.06
ARHGEF3-211ENST00000486829 ZBTB7CA1YPR0 619 aa15.4■□□□□ 0.06
ARHGEF3-211ENST00000486829 PPM1GO15355 546 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF3-211ENST00000486829 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
ARHGEF3-211ENST00000486829 FAM98CQ17RN3 349 aaKnown RBP15.39■□□□□ 0.05
ARHGEF3-211ENST00000486829 RGPD5Q99666 1765 aa15.38■□□□□ 0.05
ARHGEF3-211ENST00000486829 THSD7AQ9UPZ6 1657 aa15.38■□□□□ 0.05
ARHGEF3-211ENST00000486829 A0A0G2JS52 829 aa15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 EVA1CP58658 441 aa15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 MYT1Q01538 1121 aa15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 COL5A2P05997 1499 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 FAM208AQ9UK61 1670 aaKnown RBP15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 ERBB3P21860 1342 aa15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
ARHGEF3-211ENST00000486829 HSP90AB2PQ58FF8 381 aa15.36■□□□□ 0.05
ARHGEF3-211ENST00000486829 LARP1Q6PKG0 1096 aaKnown RBP15.36■□□□□ 0.05
ARHGEF3-211ENST00000486829 AXIN2Q9Y2T1 843 aa15.36■□□□□ 0.05
ARHGEF3-211ENST00000486829 COL3A1P02461 1466 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF3-211ENST00000486829 CCER2I3L3R5 266 aa15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 ANKRD24Q8TF21 1146 aa15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 WDR17Q8IZU2 1322 aa15.34■□□□□ 0.05
ARHGEF3-211ENST00000486829 CSB-PGBD3P0DP91 1061 aa15.33■□□□□ 0.04
ARHGEF3-211ENST00000486829 NUDCQ9Y266 331 aa15.33■□□□□ 0.04
ARHGEF3-211ENST00000486829 EIF4A2Q14240 407 aaKnown RBP15.32■□□□□ 0.04
ARHGEF3-211ENST00000486829 CRB1P82279 1406 aa15.32■□□□□ 0.04
ARHGEF3-211ENST00000486829 IL13P35225 146 aa15.31■□□□□ 0.04
ARHGEF3-211ENST00000486829 EP400Q96L91 3159 aa15.31■□□□□ 0.04
ARHGEF3-211ENST00000486829 FAM182BQ5T319 152 aa15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 BARGINQ6ZT62 677 aa15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 TOM1L2Q6ZVM7 507 aa15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 LTV1Q96GA3 475 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 MRS2Q9HD23 443 aa15.3■□□□□ 0.04
ARHGEF3-211ENST00000486829 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
ARHGEF3-211ENST00000486829 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
ARHGEF3-211ENST00000486829 MIER1Q8N108 512 aa15.29■□□□□ 0.04
ARHGEF3-211ENST00000486829 CARD10Q9BWT7 1032 aa15.29■□□□□ 0.04
ARHGEF3-211ENST00000486829 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
ARHGEF3-211ENST00000486829 NCAPD2Q15021 1401 aa15.28■□□□□ 0.04
ARHGEF3-211ENST00000486829 IGSF1Q8N6C5 1336 aa15.28■□□□□ 0.04
ARHGEF3-211ENST00000486829 NLRP2Q9NX02 1062 aa15.28■□□□□ 0.04
ARHGEF3-211ENST00000486829 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
ARHGEF3-211ENST00000486829 PARP4Q9UKK3 1724 aaKnown RBP15.28■□□□□ 0.04
ARHGEF3-211ENST00000486829 PLEKHG2Q9H7P9 1386 aa15.27■□□□□ 0.04
ARHGEF3-211ENST00000486829 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.04
ARHGEF3-211ENST00000486829 KDRP35968 1356 aa15.26■□□□□ 0.03
ARHGEF3-211ENST00000486829 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
ARHGEF3-211ENST00000486829 NBPF6Q5VWK0 638 aa15.26■□□□□ 0.03
ARHGEF3-211ENST00000486829 NBPF4Q96M43 638 aa15.26■□□□□ 0.03
ARHGEF3-211ENST00000486829 EYA1Q99502 592 aa15.26■□□□□ 0.03
ARHGEF3-211ENST00000486829 CDCA7Q9BWT1 371 aaPredicted RBP15.25■□□□□ 0.03
ARHGEF3-211ENST00000486829 LRRC37A3O60309 1634 aa15.25■□□□□ 0.03
ARHGEF3-211ENST00000486829 RGPD2P0DJD1 1756 aa15.24■□□□□ 0.03
ARHGEF3-211ENST00000486829 U2AF1L5P0DN76 240 aaPredicted RBP15.24■□□□□ 0.03
ARHGEF3-211ENST00000486829 U2AF1Q01081 240 aaKnown RBP eCLIP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms