RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 BLMP54132 1417 aaPredicted RBP19.46■□□□□ 0.71
POLR2J3-204ENST00000486319 KCNH5Q8NCM2 988 aa19.46■□□□□ 0.71
POLR2J3-204ENST00000486319 ZBTB7CA1YPR0 619 aa19.45■□□□□ 0.7
POLR2J3-204ENST00000486319 EVA1CP58658 441 aa19.45■□□□□ 0.7
POLR2J3-204ENST00000486319 WDR43Q15061 677 aaKnown RBP eCLIP19.45■□□□□ 0.7
POLR2J3-204ENST00000486319 NME9Q86XW9 330 aa19.45■□□□□ 0.7
POLR2J3-204ENST00000486319 COL14A1Q05707 1796 aaKnown RBP19.45■□□□□ 0.7
POLR2J3-204ENST00000486319 PHRF1Q9P1Y6 1649 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 SOX12O15370 315 aa19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 STRN4Q9NRL3 753 aa19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 ZRANB1Q9UGI0 708 aa19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 PLCH1Q4KWH8 1693 aa19.44■□□□□ 0.7
POLR2J3-204ENST00000486319 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.43■□□□□ 0.7
POLR2J3-204ENST00000486319 NWD2Q9ULI1 1742 aa19.43■□□□□ 0.7
POLR2J3-204ENST00000486319 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
POLR2J3-204ENST00000486319 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
POLR2J3-204ENST00000486319 FYB1O15117 783 aa19.41■□□□□ 0.7
POLR2J3-204ENST00000486319 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 SLIT3O75094 1523 aa19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 SPATA31A5Q5VU36 1347 aa19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 SPATA31A7Q8IWB4 1347 aa19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 ONECUT3O60422 494 aaPredicted RBP19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 ADAMTS8Q9UP79 889 aa19.4■□□□□ 0.7
POLR2J3-204ENST00000486319 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
POLR2J3-204ENST00000486319 ARHGEF25Q86VW2 580 aa19.39■□□□□ 0.69
POLR2J3-204ENST00000486319 SEPT12Q8IYM1 358 aa19.39■□□□□ 0.69
POLR2J3-204ENST00000486319 GLI3P10071 1580 aa19.38■□□□□ 0.69
POLR2J3-204ENST00000486319 AATKQ6ZMQ8 1374 aa19.38■□□□□ 0.69
POLR2J3-204ENST00000486319 A0A0G2JS52 829 aa19.38■□□□□ 0.69
POLR2J3-204ENST00000486319 MYT1Q01538 1121 aa19.38■□□□□ 0.69
POLR2J3-204ENST00000486319 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
POLR2J3-204ENST00000486319 TNNT2P45379 298 aaPredicted RBP19.37■□□□□ 0.69
POLR2J3-204ENST00000486319 UPF1Q92900 1129 aaKnown RBP eCLIP19.37■□□□□ 0.69
POLR2J3-204ENST00000486319 CFAP53Q96M91 514 aa19.37■□□□□ 0.69
POLR2J3-204ENST00000486319 CAMTA1Q9Y6Y1 1673 aa19.37■□□□□ 0.69
POLR2J3-204ENST00000486319 SPATA31A1Q5TZJ5 1347 aa19.36■□□□□ 0.69
POLR2J3-204ENST00000486319 LARP1Q6PKG0 1096 aaKnown RBP19.36■□□□□ 0.69
POLR2J3-204ENST00000486319 USP35Q9P2H5 1018 aa19.36■□□□□ 0.69
POLR2J3-204ENST00000486319 NRAPQ86VF7 1730 aa19.36■□□□□ 0.69
POLR2J3-204ENST00000486319 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
POLR2J3-204ENST00000486319 COG3Q96JB2 828 aa19.35■□□□□ 0.69
POLR2J3-204ENST00000486319 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
POLR2J3-204ENST00000486319 MTHFSP49914 203 aa19.35■□□□□ 0.69
POLR2J3-204ENST00000486319 PDE3BQ13370 1112 aa19.34■□□□□ 0.69
POLR2J3-204ENST00000486319 MAP2P11137 1827 aaKnown RBP19.33■□□□□ 0.68
POLR2J3-204ENST00000486319 NEFLP07196 543 aa19.32■□□□□ 0.68
POLR2J3-204ENST00000486319 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
POLR2J3-204ENST00000486319 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
POLR2J3-204ENST00000486319 OVOS2A0A0J9YW53 1432 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 OVOS2Q6IE36 1432 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 NFAT5O94916 1531 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 KRT27Q7Z3Y8 459 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
POLR2J3-204ENST00000486319 TOM1L2Q6ZVM7 507 aa19.3■□□□□ 0.68
POLR2J3-204ENST00000486319 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
POLR2J3-204ENST00000486319 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
POLR2J3-204ENST00000486319 THRAP3Q9Y2W1 955 aaKnown RBP19.3■□□□□ 0.68
POLR2J3-204ENST00000486319 WDR17Q8IZU2 1322 aa19.28■□□□□ 0.68
POLR2J3-204ENST00000486319 CRB1P82279 1406 aa19.28■□□□□ 0.68
POLR2J3-204ENST00000486319 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
POLR2J3-204ENST00000486319 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
POLR2J3-204ENST00000486319 EP400Q96L91 3159 aa19.27■□□□□ 0.68
POLR2J3-204ENST00000486319 USP54Q70EL1 1684 aa19.26■□□□□ 0.67
POLR2J3-204ENST00000486319 FBLN1P23142 703 aa19.26■□□□□ 0.67
POLR2J3-204ENST00000486319 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
POLR2J3-204ENST00000486319 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-204ENST00000486319 COL3A1P02461 1466 aaPredicted RBP19.25■□□□□ 0.67
POLR2J3-204ENST00000486319 COL18A1P39060 1754 aa19.25■□□□□ 0.67
POLR2J3-204ENST00000486319 CCDC125Q86Z20 511 aa19.25■□□□□ 0.67
POLR2J3-204ENST00000486319 AMPHP49418 695 aa19.24■□□□□ 0.67
POLR2J3-204ENST00000486319 IP6K1Q92551 441 aa19.24■□□□□ 0.67
POLR2J3-204ENST00000486319 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
POLR2J3-204ENST00000486319 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
POLR2J3-204ENST00000486319 CCDC146Q8IYE0 955 aa19.23■□□□□ 0.67
POLR2J3-204ENST00000486319 ABCC6O95255 1503 aa19.22■□□□□ 0.67
POLR2J3-204ENST00000486319 FKBP8Q14318 412 aa19.22■□□□□ 0.67
POLR2J3-204ENST00000486319 RRS1Q15050 365 aaKnown RBP19.22■□□□□ 0.67
POLR2J3-204ENST00000486319 ANKRD24Q8TF21 1146 aa19.22■□□□□ 0.67
POLR2J3-204ENST00000486319 ERBB3P21860 1342 aa19.22■□□□□ 0.67
POLR2J3-204ENST00000486319 FAM182BQ5T319 152 aa19.21■□□□□ 0.67
POLR2J3-204ENST00000486319 RUNDC1Q96C34 613 aa19.21■□□□□ 0.67
POLR2J3-204ENST00000486319 NLRP2Q9NX02 1062 aa19.21■□□□□ 0.67
POLR2J3-204ENST00000486319 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
POLR2J3-204ENST00000486319 APAF1O14727 1248 aa19.2■□□□□ 0.66
POLR2J3-204ENST00000486319 HOXC9P31274 260 aa19.2■□□□□ 0.66
POLR2J3-204ENST00000486319 LTV1Q96GA3 475 aaPredicted RBP19.2■□□□□ 0.66
POLR2J3-204ENST00000486319 POLKQ9UBT6 870 aa19.2■□□□□ 0.66
POLR2J3-204ENST00000486319 THSD7AQ9UPZ6 1657 aa19.19■□□□□ 0.66
POLR2J3-204ENST00000486319 DIAPH1O60610 1272 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-204ENST00000486319 SF3B2Q13435 895 aaKnown RBP19.19■□□□□ 0.66
POLR2J3-204ENST00000486319 ZNF521Q96K83 1311 aa19.19■□□□□ 0.66
POLR2J3-204ENST00000486319 CDCA7Q9BWT1 371 aaPredicted RBP19.19■□□□□ 0.66
POLR2J3-204ENST00000486319 U2AF1L5P0DN76 240 aaPredicted RBP19.18■□□□□ 0.66
POLR2J3-204ENST00000486319 U2AF1Q01081 240 aaKnown RBP eCLIP19.18■□□□□ 0.66
POLR2J3-204ENST00000486319 DDB1Q16531 1140 aa19.17■□□□□ 0.66
POLR2J3-204ENST00000486319 NCBP3Q53F19 620 aaKnown RBP19.17■□□□□ 0.66
POLR2J3-204ENST00000486319 FAM196AQ6ZSG2 479 aa19.17■□□□□ 0.66
POLR2J3-204ENST00000486319 PNNQ9H307 717 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms