RNA–Protein interactions for RNA: ENST00000485769.5

PBX1-209, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-209ENST00000485769 SPATA31A5Q5VU36 1347 aa28.25■■■□□ 2.11
PBX1-209ENST00000485769 SPATA31A7Q8IWB4 1347 aa28.25■■■□□ 2.11
PBX1-209ENST00000485769 COL5A2P05997 1499 aaPredicted RBP28.25■■■□□ 2.11
PBX1-209ENST00000485769 AMPHP49418 695 aa28.24■■■□□ 2.11
PBX1-209ENST00000485769 COL18A1P39060 1754 aa28.24■■■□□ 2.11
PBX1-209ENST00000485769 IP6K1Q92551 441 aa28.23■■■□□ 2.11
PBX1-209ENST00000485769 AXIN2Q9Y2T1 843 aa28.23■■■□□ 2.11
PBX1-209ENST00000485769 MAP3K19Q56UN5 1328 aa28.22■■■□□ 2.11
PBX1-209ENST00000485769 LTN1O94822 1766 aa28.22■■■□□ 2.11
PBX1-209ENST00000485769 BLMP54132 1417 aaPredicted RBP28.22■■■□□ 2.11
PBX1-209ENST00000485769 CSB-PGBD3P0DP91 1061 aa28.21■■■□□ 2.11
PBX1-209ENST00000485769 LARP1Q6PKG0 1096 aaKnown RBP28.21■■■□□ 2.11
PBX1-209ENST00000485769 RTL1A6NKG5 1358 aa28.21■■■□□ 2.11
PBX1-209ENST00000485769 KIF24Q5T7B8 1368 aa28.21■■■□□ 2.11
PBX1-209ENST00000485769 SPATA31A1Q5TZJ5 1347 aa28.2■■■□□ 2.11
PBX1-209ENST00000485769 WDR17Q8IZU2 1322 aa28.2■■■□□ 2.11
PBX1-209ENST00000485769 PER1O15534 1290 aaPredicted RBP28.2■■■□□ 2.1
PBX1-209ENST00000485769 MORC1Q86VD1 984 aa28.2■■■□□ 2.1
PBX1-209ENST00000485769 THRAP3Q9Y2W1 955 aaKnown RBP28.2■■■□□ 2.1
PBX1-209ENST00000485769 ANKRD26Q9UPS8 1709 aa28.2■■■□□ 2.1
PBX1-209ENST00000485769 GLI3P10071 1580 aa28.2■■■□□ 2.1
PBX1-209ENST00000485769 CRB1P82279 1406 aa28.19■■■□□ 2.1
PBX1-209ENST00000485769 ONECUT3O60422 494 aaPredicted RBP28.19■■■□□ 2.1
PBX1-209ENST00000485769 TOM1L2Q6ZVM7 507 aa28.19■■■□□ 2.1
PBX1-209ENST00000485769 AMER1Q5JTC6 1135 aaPredicted RBP28.18■■■□□ 2.1
PBX1-209ENST00000485769 RGS12O14924 1447 aa28.18■■■□□ 2.1
PBX1-209ENST00000485769 RRS1Q15050 365 aaKnown RBP28.17■■■□□ 2.1
PBX1-209ENST00000485769 NPC1L1Q9UHC9 1359 aa28.16■■■□□ 2.1
PBX1-209ENST00000485769 HOXC9P31274 260 aa28.16■■■□□ 2.1
PBX1-209ENST00000485769 TCP11L2Q8N4U5 519 aa28.16■■■□□ 2.1
PBX1-209ENST00000485769 A0A0G2JS52 829 aa28.15■■■□□ 2.1
PBX1-209ENST00000485769 FBLN1P23142 703 aa28.15■■■□□ 2.1
PBX1-209ENST00000485769 MYT1Q01538 1121 aa28.15■■■□□ 2.1
PBX1-209ENST00000485769 FAM98CQ17RN3 349 aaKnown RBP28.15■■■□□ 2.1
PBX1-209ENST00000485769 BARGINQ6ZT62 677 aa28.15■■■□□ 2.1
PBX1-209ENST00000485769 ERBB3P21860 1342 aa28.15■■■□□ 2.1
PBX1-209ENST00000485769 ANKRD24Q8TF21 1146 aa28.14■■■□□ 2.1
PBX1-209ENST00000485769 CARD10Q9BWT7 1032 aa28.14■■■□□ 2.1
PBX1-209ENST00000485769 USP35Q9P2H5 1018 aa28.14■■■□□ 2.1
PBX1-209ENST00000485769 FLT4P35916 1363 aa28.13■■■□□ 2.09
PBX1-209ENST00000485769 SEPT12Q8IYM1 358 aa28.13■■■□□ 2.09
PBX1-209ENST00000485769 RGPD5Q99666 1765 aa28.13■■■□□ 2.09
PBX1-209ENST00000485769 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
PBX1-209ENST00000485769 SMG6Q86US8 1419 aaKnown RBP28.1■■■□□ 2.09
PBX1-209ENST00000485769 CDCA7Q9BWT1 371 aaPredicted RBP28.1■■■□□ 2.09
PBX1-209ENST00000485769 NLRP2Q9NX02 1062 aa28.1■■■□□ 2.09
PBX1-209ENST00000485769 INSRP06213 1382 aa28.1■■■□□ 2.09
PBX1-209ENST00000485769 SOCS7O14512 581 aa28.09■■■□□ 2.09
PBX1-209ENST00000485769 PPM1GO15355 546 aaPredicted RBP28.09■■■□□ 2.09
PBX1-209ENST00000485769 POLKQ9UBT6 870 aa28.09■■■□□ 2.09
PBX1-209ENST00000485769 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
PBX1-209ENST00000485769 EMILIN1Q9Y6C2 1016 aa28.08■■■□□ 2.09
PBX1-209ENST00000485769 LTV1Q96GA3 475 aaPredicted RBP28.07■■■□□ 2.08
PBX1-209ENST00000485769 FAM208AQ9UK61 1670 aaKnown RBP28.06■■■□□ 2.08
PBX1-209ENST00000485769 MAP2P11137 1827 aaKnown RBP28.06■■■□□ 2.08
PBX1-209ENST00000485769 HSP90AB2PQ58FF8 381 aa28.04■■■□□ 2.08
PBX1-209ENST00000485769 KRT27Q7Z3Y8 459 aa28.03■■■□□ 2.08
PBX1-209ENST00000485769 THSD7AQ9UPZ6 1657 aa28.02■■■□□ 2.08
PBX1-209ENST00000485769 PEAK1Q9H792 1746 aa28.01■■■□□ 2.07
PBX1-209ENST00000485769 DDX10Q13206 875 aaKnown RBP28■■■□□ 2.07
PBX1-209ENST00000485769 PDE3BQ13370 1112 aa28■■■□□ 2.07
PBX1-209ENST00000485769 ZNF316A6NFI3 1004 aaPredicted RBP27.98■■■□□ 2.07
PBX1-209ENST00000485769 CNGB1Q14028 1251 aaPredicted RBP27.97■■■□□ 2.07
PBX1-209ENST00000485769 IL2RBP14784 551 aa27.96■■■□□ 2.07
PBX1-209ENST00000485769 DDB1Q16531 1140 aa27.96■■■□□ 2.07
PBX1-209ENST00000485769 BRWD3Q6RI45 1802 aa27.95■■■□□ 2.07
PBX1-209ENST00000485769 PARP4Q9UKK3 1724 aaKnown RBP27.95■■■□□ 2.06
PBX1-209ENST00000485769 EXOC5O00471 708 aa27.94■■■□□ 2.06
PBX1-209ENST00000485769 DISP2A7MBM2 1401 aa27.93■■■□□ 2.06
PBX1-209ENST00000485769 MTHFSP49914 203 aa27.93■■■□□ 2.06
PBX1-209ENST00000485769 NBPF6Q5VWK0 638 aa27.93■■■□□ 2.06
PBX1-209ENST00000485769 NBPF4Q96M43 638 aa27.93■■■□□ 2.06
PBX1-209ENST00000485769 WNK3Q9BYP7 1800 aa27.91■■■□□ 2.06
PBX1-209ENST00000485769 EIF4A2Q14240 407 aaKnown RBP27.9■■■□□ 2.06
PBX1-209ENST00000485769 RAPGEF4Q8WZA2 1011 aa27.9■■■□□ 2.06
PBX1-209ENST00000485769 FAM196AQ6ZSG2 479 aa27.89■■■□□ 2.06
PBX1-209ENST00000485769 CCDC125Q86Z20 511 aa27.89■■■□□ 2.06
PBX1-209ENST00000485769 UPF1Q92900 1129 aaKnown RBP eCLIP27.87■■■□□ 2.05
PBX1-209ENST00000485769 TATP17735 454 aaPredicted RBP27.86■■■□□ 2.05
PBX1-209ENST00000485769 CFAP53Q96M91 514 aa27.86■■■□□ 2.05
PBX1-209ENST00000485769 EYA1Q99502 592 aa27.86■■■□□ 2.05
PBX1-209ENST00000485769 LRRC37A3O60309 1634 aa27.85■■■□□ 2.05
PBX1-209ENST00000485769 TNS2Q63HR2 1409 aa27.85■■■□□ 2.05
PBX1-209ENST00000485769 USHBP1Q8N6Y0 703 aa27.85■■■□□ 2.05
PBX1-209ENST00000485769 RGPD2P0DJD1 1756 aa27.85■■■□□ 2.05
PBX1-209ENST00000485769 RALBP1Q15311 655 aa27.84■■■□□ 2.05
PBX1-209ENST00000485769 NCAPD2Q15021 1401 aa27.83■■■□□ 2.05
PBX1-209ENST00000485769 DIAPH1O60610 1272 aaKnown RBP27.82■■■□□ 2.04
PBX1-209ENST00000485769 PPP2R1AP30153 589 aa27.82■■■□□ 2.04
PBX1-209ENST00000485769 SF3B2Q13435 895 aaKnown RBP27.82■■■□□ 2.04
PBX1-209ENST00000485769 PARD3Q8TEW0 1356 aa27.82■■■□□ 2.04
PBX1-209ENST00000485769 OVOS2A0A0G2JMS6 1433 aa27.82■■■□□ 2.04
PBX1-209ENST00000485769 ZCRB1Q8TBF4 217 aaKnown RBP27.81■■■□□ 2.04
PBX1-209ENST00000485769 IGSF1Q8N6C5 1336 aa27.81■■■□□ 2.04
PBX1-209ENST00000485769 IL13P35225 146 aa27.8■■■□□ 2.04
PBX1-209ENST00000485769 PLEKHG2Q9H7P9 1386 aa27.79■■■□□ 2.04
PBX1-209ENST00000485769 FAM182BQ5T319 152 aa27.79■■■□□ 2.04
PBX1-209ENST00000485769 MARCH10Q8NA82 808 aaPredicted RBP27.78■■■□□ 2.04
PBX1-209ENST00000485769 MEGF6O75095 1541 aa27.77■■■□□ 2.04
PBX1-209ENST00000485769 BCL9O00512 1426 aa27.76■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms