RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CPDO75976 1380 aa24.98■■□□□ 1.59
RNF38-207ENST00000484621 ZBTB7CA1YPR0 619 aa24.98■■□□□ 1.59
RNF38-207ENST00000484621 USP35Q9P2H5 1018 aa24.98■■□□□ 1.59
RNF38-207ENST00000484621 A0A1W2PP64 1363 aa24.97■■□□□ 1.59
RNF38-207ENST00000484621 PARD3Q8TEW0 1356 aa24.96■■□□□ 1.59
RNF38-207ENST00000484621 CDCA8Q53HL2 280 aa24.96■■□□□ 1.59
RNF38-207ENST00000484621 EDC4Q6P2E9 1401 aaKnown RBP24.95■■□□□ 1.59
RNF38-207ENST00000484621 EVA1CP58658 441 aa24.95■■□□□ 1.58
RNF38-207ENST00000484621 SOX12O15370 315 aa24.94■■□□□ 1.58
RNF38-207ENST00000484621 KCNH5Q8NCM2 988 aa24.93■■□□□ 1.58
RNF38-207ENST00000484621 LMO7Q8WWI1 1683 aa24.93■■□□□ 1.58
RNF38-207ENST00000484621 NME9Q86XW9 330 aa24.92■■□□□ 1.58
RNF38-207ENST00000484621 EIF4G2P78344 907 aaKnown RBP eCLIP24.91■■□□□ 1.58
RNF38-207ENST00000484621 CASZ1Q86V15 1759 aa24.9■■□□□ 1.58
RNF38-207ENST00000484621 LARP1Q6PKG0 1096 aaKnown RBP24.9■■□□□ 1.58
RNF38-207ENST00000484621 USP54Q70EL1 1684 aa24.9■■□□□ 1.58
RNF38-207ENST00000484621 PDGFDQ9GZP0 370 aaPredicted RBP24.89■■□□□ 1.58
RNF38-207ENST00000484621 USP31Q70CQ4 1352 aa24.89■■□□□ 1.57
RNF38-207ENST00000484621 ANKRD36BQ8N2N9 1353 aa24.89■■□□□ 1.57
RNF38-207ENST00000484621 KCNQ2O43526 872 aa24.88■■□□□ 1.57
RNF38-207ENST00000484621 ANO8Q9HCE9 1232 aaPredicted RBP24.88■■□□□ 1.57
RNF38-207ENST00000484621 PEAK1Q9H792 1746 aa24.88■■□□□ 1.57
RNF38-207ENST00000484621 HSPA5P11021 654 aaKnown RBP24.87■■□□□ 1.57
RNF38-207ENST00000484621 SPON1Q9HCB6 807 aa24.87■■□□□ 1.57
RNF38-207ENST00000484621 PPP1R1BQ9UD71 204 aaPredicted RBP24.87■■□□□ 1.57
RNF38-207ENST00000484621 AATKQ6ZMQ8 1374 aa24.87■■□□□ 1.57
RNF38-207ENST00000484621 COL18A1P39060 1754 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 RGPD5Q99666 1765 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 MYOM1P52179 1685 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 BARGINQ6ZT62 677 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 PTF1AQ7RTS3 328 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 NFAT5O94916 1531 aa24.86■■□□□ 1.57
RNF38-207ENST00000484621 COL5A2P05997 1499 aaPredicted RBP24.85■■□□□ 1.57
RNF38-207ENST00000484621 PDE3BQ13370 1112 aa24.85■■□□□ 1.57
RNF38-207ENST00000484621 ARHGEF25Q86VW2 580 aa24.85■■□□□ 1.57
RNF38-207ENST00000484621 PARP4Q9UKK3 1724 aaKnown RBP24.85■■□□□ 1.57
RNF38-207ENST00000484621 NBPF14Q5TI25 921 aa24.84■■□□□ 1.57
RNF38-207ENST00000484621 POLR3GLQ9BT43 218 aa24.84■■□□□ 1.57
RNF38-207ENST00000484621 LTN1O94822 1766 aa24.83■■□□□ 1.57
RNF38-207ENST00000484621 SBF2Q86WG5 1849 aa24.82■■□□□ 1.56
RNF38-207ENST00000484621 LRRC37A3O60309 1634 aa24.81■■□□□ 1.56
RNF38-207ENST00000484621 OVOS2A0A0J9YW53 1432 aa24.8■■□□□ 1.56
RNF38-207ENST00000484621 OVOS2Q6IE36 1432 aa24.8■■□□□ 1.56
RNF38-207ENST00000484621 TCP11L2Q8N4U5 519 aa24.8■■□□□ 1.56
RNF38-207ENST00000484621 COG3Q96JB2 828 aa24.8■■□□□ 1.56
RNF38-207ENST00000484621 AXIN2Q9Y2T1 843 aa24.8■■□□□ 1.56
RNF38-207ENST00000484621 RGPD3A6NKT7 1758 aaPredicted RBP24.78■■□□□ 1.56
RNF38-207ENST00000484621 RGPD4Q7Z3J3 1758 aa24.78■■□□□ 1.56
RNF38-207ENST00000484621 KIF20BQ96Q89 1820 aa24.78■■□□□ 1.56
RNF38-207ENST00000484621 CRB1P82279 1406 aa24.78■■□□□ 1.56
RNF38-207ENST00000484621 TOM1L2Q6ZVM7 507 aa24.77■■□□□ 1.56
RNF38-207ENST00000484621 ZNF784Q8NCA9 323 aaPredicted RBP24.77■■□□□ 1.56
RNF38-207ENST00000484621 ABCC6O95255 1503 aa24.76■■□□□ 1.55
RNF38-207ENST00000484621 CSB-PGBD3P0DP91 1061 aa24.76■■□□□ 1.55
RNF38-207ENST00000484621 THRAP3Q9Y2W1 955 aaKnown RBP24.75■■□□□ 1.55
RNF38-207ENST00000484621 WDR17Q8IZU2 1322 aa24.75■■□□□ 1.55
RNF38-207ENST00000484621 ZBTB7AO95365 584 aa24.74■■□□□ 1.55
RNF38-207ENST00000484621 GGNBP2Q9H3C7 697 aa24.74■■□□□ 1.55
RNF38-207ENST00000484621 FYB1O15117 783 aa24.73■■□□□ 1.55
RNF38-207ENST00000484621 NSD3Q9BZ95 1437 aa24.72■■□□□ 1.55
RNF38-207ENST00000484621 PTGER2P43116 358 aa24.72■■□□□ 1.55
RNF38-207ENST00000484621 PROM2Q8N271 834 aa24.72■■□□□ 1.55
RNF38-207ENST00000484621 WNK3Q9BYP7 1800 aa24.72■■□□□ 1.55
RNF38-207ENST00000484621 OVOS2A0A0G2JMS6 1433 aa24.71■■□□□ 1.55
RNF38-207ENST00000484621 CARD14Q9BXL6 1004 aa24.71■■□□□ 1.55
RNF38-207ENST00000484621 ATF5Q9Y2D1 282 aaPredicted RBP24.69■■□□□ 1.54
RNF38-207ENST00000484621 DCAF8L1A6NGE4 600 aa24.67■■□□□ 1.54
RNF38-207ENST00000484621 CARD10Q9BWT7 1032 aa24.67■■□□□ 1.54
RNF38-207ENST00000484621 FBLN1P23142 703 aa24.66■■□□□ 1.54
RNF38-207ENST00000484621 ERBB3P21860 1342 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 MAP3K19Q56UN5 1328 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 SENP3-EIF4A1A0A087X0R7 540 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 PLSCR1O15162 318 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 AMPHP49418 695 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 ANKRD24Q8TF21 1146 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 IP6K1Q92551 441 aa24.65■■□□□ 1.54
RNF38-207ENST00000484621 C11orf95C9JLR9 678 aaPredicted RBP24.64■■□□□ 1.54
RNF38-207ENST00000484621 NLRP2Q9NX02 1062 aa24.64■■□□□ 1.54
RNF38-207ENST00000484621 UTRNP46939 3433 aa24.64■■□□□ 1.53
RNF38-207ENST00000484621 CGNL1Q0VF96 1302 aa24.63■■□□□ 1.53
RNF38-207ENST00000484621 MARCH10Q8NA82 808 aaPredicted RBP24.63■■□□□ 1.53
RNF38-207ENST00000484621 FHDC1Q9C0D6 1143 aaPredicted RBP24.63■■□□□ 1.53
RNF38-207ENST00000484621 CCDC7Q96M83 1385 aa24.63■■□□□ 1.53
RNF38-207ENST00000484621 RRS1Q15050 365 aaKnown RBP24.62■■□□□ 1.53
RNF38-207ENST00000484621 LTV1Q96GA3 475 aaPredicted RBP24.62■■□□□ 1.53
RNF38-207ENST00000484621 CDCA7Q9BWT1 371 aaPredicted RBP24.62■■□□□ 1.53
RNF38-207ENST00000484621 BCL11BQ9C0K0 894 aaPredicted RBP24.62■■□□□ 1.53
RNF38-207ENST00000484621 DDB1Q16531 1140 aa24.61■■□□□ 1.53
RNF38-207ENST00000484621 PANK3Q9H999 370 aa24.61■■□□□ 1.53
RNF38-207ENST00000484621 FAM208AQ9UK61 1670 aaKnown RBP24.6■■□□□ 1.53
RNF38-207ENST00000484621 HOXC9P31274 260 aa24.6■■□□□ 1.53
RNF38-207ENST00000484621 SYT17Q9BSW7 474 aa24.6■■□□□ 1.53
RNF38-207ENST00000484621 CHD4Q14839 1912 aa24.59■■□□□ 1.53
RNF38-207ENST00000484621 SGIP1Q9BQI5 828 aa24.59■■□□□ 1.53
RNF38-207ENST00000484621 RTL1A6NKG5 1358 aa24.57■■□□□ 1.52
RNF38-207ENST00000484621 ANKRD26Q9UPS8 1709 aa24.57■■□□□ 1.52
RNF38-207ENST00000484621 KIF7Q2M1P5 1343 aa24.57■■□□□ 1.52
RNF38-207ENST00000484621 MAP2P11137 1827 aaKnown RBP24.56■■□□□ 1.52
RNF38-207ENST00000484621 C1QTNF8P60827 252 aa24.56■■□□□ 1.52
RNF38-207ENST00000484621 RGPD2P0DJD1 1756 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms