RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 COG3Q96JB2 828 aa17.01■□□□□ 0.31
SHANK1-208ENST00000483981 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
SHANK1-208ENST00000483981 LTN1O94822 1766 aa17■□□□□ 0.31
SHANK1-208ENST00000483981 FBLN1P23142 703 aa17■□□□□ 0.31
SHANK1-208ENST00000483981 STRN4Q9NRL3 753 aa17■□□□□ 0.31
SHANK1-208ENST00000483981 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
SHANK1-208ENST00000483981 CCDC9Q9Y3X0 531 aaKnown RBP16.99■□□□□ 0.31
SHANK1-208ENST00000483981 CCDC7Q96M83 1385 aa16.99■□□□□ 0.31
SHANK1-208ENST00000483981 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
SHANK1-208ENST00000483981 EVA1CP58658 441 aa16.98■□□□□ 0.31
SHANK1-208ENST00000483981 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
SHANK1-208ENST00000483981 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SHANK1-208ENST00000483981 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
SHANK1-208ENST00000483981 BRWD3Q6RI45 1802 aa16.97■□□□□ 0.31
SHANK1-208ENST00000483981 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
SHANK1-208ENST00000483981 MAP3K19Q56UN5 1328 aa16.96■□□□□ 0.31
SHANK1-208ENST00000483981 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
SHANK1-208ENST00000483981 CRB1P82279 1406 aa16.96■□□□□ 0.31
SHANK1-208ENST00000483981 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
SHANK1-208ENST00000483981 PER1O15534 1290 aaPredicted RBP16.95■□□□□ 0.3
SHANK1-208ENST00000483981 IP6K1Q92551 441 aa16.95■□□□□ 0.3
SHANK1-208ENST00000483981 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
SHANK1-208ENST00000483981 UPF1Q92900 1129 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHANK1-208ENST00000483981 THRAP3Q9Y2W1 955 aaKnown RBP16.93■□□□□ 0.3
SHANK1-208ENST00000483981 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-208ENST00000483981 ERBB3P21860 1342 aa16.93■□□□□ 0.3
SHANK1-208ENST00000483981 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
SHANK1-208ENST00000483981 HOXC9P31274 260 aa16.92■□□□□ 0.3
SHANK1-208ENST00000483981 RRS1Q15050 365 aaKnown RBP16.92■□□□□ 0.3
SHANK1-208ENST00000483981 USP35Q9P2H5 1018 aa16.92■□□□□ 0.3
SHANK1-208ENST00000483981 PEAK1Q9H792 1746 aa16.92■□□□□ 0.3
SHANK1-208ENST00000483981 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-208ENST00000483981 TOM1L2Q6ZVM7 507 aa16.91■□□□□ 0.3
SHANK1-208ENST00000483981 CARD10Q9BWT7 1032 aa16.91■□□□□ 0.3
SHANK1-208ENST00000483981 NSD2O96028 1365 aa16.9■□□□□ 0.3
SHANK1-208ENST00000483981 ANKRD24Q8TF21 1146 aa16.9■□□□□ 0.3
SHANK1-208ENST00000483981 RTL1A6NKG5 1358 aa16.89■□□□□ 0.3
SHANK1-208ENST00000483981 EP400Q96L91 3159 aa16.89■□□□□ 0.29
SHANK1-208ENST00000483981 KRT27Q7Z3Y8 459 aa16.89■□□□□ 0.29
SHANK1-208ENST00000483981 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
SHANK1-208ENST00000483981 DISP2A7MBM2 1401 aa16.88■□□□□ 0.29
SHANK1-208ENST00000483981 PARP4Q9UKK3 1724 aaKnown RBP16.88■□□□□ 0.29
SHANK1-208ENST00000483981 WNK3Q9BYP7 1800 aa16.88■□□□□ 0.29
SHANK1-208ENST00000483981 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
SHANK1-208ENST00000483981 AMPHP49418 695 aa16.87■□□□□ 0.29
SHANK1-208ENST00000483981 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
SHANK1-208ENST00000483981 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
SHANK1-208ENST00000483981 MAP2P11137 1827 aaKnown RBP16.86■□□□□ 0.29
SHANK1-208ENST00000483981 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
SHANK1-208ENST00000483981 EMILIN1Q9Y6C2 1016 aa16.86■□□□□ 0.29
SHANK1-208ENST00000483981 INSRP06213 1382 aa16.86■□□□□ 0.29
SHANK1-208ENST00000483981 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
SHANK1-208ENST00000483981 ZEB1P37275 1124 aaPredicted RBP16.85■□□□□ 0.29
SHANK1-208ENST00000483981 FLT4P35916 1363 aa16.85■□□□□ 0.29
SHANK1-208ENST00000483981 A0A0G2JS52 829 aa16.84■□□□□ 0.29
SHANK1-208ENST00000483981 MYT1Q01538 1121 aa16.84■□□□□ 0.29
SHANK1-208ENST00000483981 LRRC37A3O60309 1634 aa16.84■□□□□ 0.29
SHANK1-208ENST00000483981 RGPD2P0DJD1 1756 aa16.83■□□□□ 0.28
SHANK1-208ENST00000483981 FAM182BQ5T319 152 aa16.83■□□□□ 0.28
SHANK1-208ENST00000483981 LTV1Q96GA3 475 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-208ENST00000483981 CDCA7Q9BWT1 371 aaPredicted RBP16.83■□□□□ 0.28
SHANK1-208ENST00000483981 NLRP2Q9NX02 1062 aa16.83■□□□□ 0.28
SHANK1-208ENST00000483981 NPC1L1Q9UHC9 1359 aa16.83■□□□□ 0.28
SHANK1-208ENST00000483981 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
SHANK1-208ENST00000483981 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
SHANK1-208ENST00000483981 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
SHANK1-208ENST00000483981 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
SHANK1-208ENST00000483981 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
SHANK1-208ENST00000483981 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
SHANK1-208ENST00000483981 DDB1Q16531 1140 aa16.79■□□□□ 0.28
SHANK1-208ENST00000483981 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
SHANK1-208ENST00000483981 IL2RBP14784 551 aa16.78■□□□□ 0.28
SHANK1-208ENST00000483981 PDE3BQ13370 1112 aa16.78■□□□□ 0.28
SHANK1-208ENST00000483981 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
SHANK1-208ENST00000483981 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
SHANK1-208ENST00000483981 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
SHANK1-208ENST00000483981 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
SHANK1-208ENST00000483981 BCL9O00512 1426 aa16.77■□□□□ 0.27
SHANK1-208ENST00000483981 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
SHANK1-208ENST00000483981 EXOC5O00471 708 aa16.76■□□□□ 0.27
SHANK1-208ENST00000483981 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
SHANK1-208ENST00000483981 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
SHANK1-208ENST00000483981 MEGF6O75095 1541 aa16.75■□□□□ 0.27
SHANK1-208ENST00000483981 EYA1Q99502 592 aa16.74■□□□□ 0.27
SHANK1-208ENST00000483981 TNS1Q9HBL0 1735 aaKnown RBP16.73■□□□□ 0.27
SHANK1-208ENST00000483981 OVOS2A0A0G2JMS6 1433 aa16.73■□□□□ 0.27
SHANK1-208ENST00000483981 SBF2Q86WG5 1849 aa16.73■□□□□ 0.27
SHANK1-208ENST00000483981 MTHFSP49914 203 aa16.72■□□□□ 0.27
SHANK1-208ENST00000483981 RGPD1P0DJD0 1748 aa16.72■□□□□ 0.27
SHANK1-208ENST00000483981 SHANK3Q9BYB0 1731 aa16.72■□□□□ 0.27
SHANK1-208ENST00000483981 TRIM37O94972 964 aa16.71■□□□□ 0.27
SHANK1-208ENST00000483981 IL13P35225 146 aa16.7■□□□□ 0.26
SHANK1-208ENST00000483981 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
SHANK1-208ENST00000483981 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
SHANK1-208ENST00000483981 PTF1AQ7RTS3 328 aa16.69■□□□□ 0.26
SHANK1-208ENST00000483981 ZCRB1Q8TBF4 217 aaKnown RBP16.68■□□□□ 0.26
SHANK1-208ENST00000483981 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-208ENST00000483981 DDX10Q13206 875 aaKnown RBP16.67■□□□□ 0.26
SHANK1-208ENST00000483981 CNGB1Q14028 1251 aaPredicted RBP16.67■□□□□ 0.26
SHANK1-208ENST00000483981 RAPGEF4Q8WZA2 1011 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms