RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 FYB1O15117 783 aa12.4□□□□□ -0.42
POLR1A-207ENST00000483538 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 WASHC2AQ641Q2 1341 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
POLR1A-207ENST00000483538 SOX12O15370 315 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 AXIN2Q9Y2T1 843 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
POLR1A-207ENST00000483538 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
POLR1A-207ENST00000483538 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 CRB1P82279 1406 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 FBLN1P23142 703 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 LARP1Q6PKG0 1096 aaKnown RBP12.37□□□□□ -0.43
POLR1A-207ENST00000483538 POLR3GLQ9BT43 218 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
POLR1A-207ENST00000483538 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
POLR1A-207ENST00000483538 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
POLR1A-207ENST00000483538 STRN4Q9NRL3 753 aa12.36□□□□□ -0.43
POLR1A-207ENST00000483538 ZBTB7CA1YPR0 619 aa12.35□□□□□ -0.43
POLR1A-207ENST00000483538 PANK3Q9H999 370 aa12.35□□□□□ -0.43
POLR1A-207ENST00000483538 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
POLR1A-207ENST00000483538 BLMP54132 1417 aaPredicted RBP12.35□□□□□ -0.43
POLR1A-207ENST00000483538 MAP3K19Q56UN5 1328 aa12.35□□□□□ -0.43
POLR1A-207ENST00000483538 FAM98CQ17RN3 349 aaKnown RBP12.34□□□□□ -0.43
POLR1A-207ENST00000483538 COG3Q96JB2 828 aa12.34□□□□□ -0.43
POLR1A-207ENST00000483538 ERBB3P21860 1342 aa12.34□□□□□ -0.43
POLR1A-207ENST00000483538 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
POLR1A-207ENST00000483538 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
POLR1A-207ENST00000483538 SBF2Q86WG5 1849 aa12.33□□□□□ -0.44
POLR1A-207ENST00000483538 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.44
POLR1A-207ENST00000483538 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
POLR1A-207ENST00000483538 CGNL1Q0VF96 1302 aa12.33□□□□□ -0.44
POLR1A-207ENST00000483538 RGPD1P0DJD0 1748 aa12.32□□□□□ -0.44
POLR1A-207ENST00000483538 SEPT12Q8IYM1 358 aa12.32□□□□□ -0.44
POLR1A-207ENST00000483538 NSD2O96028 1365 aa12.31□□□□□ -0.44
POLR1A-207ENST00000483538 RRS1Q15050 365 aaKnown RBP12.31□□□□□ -0.44
POLR1A-207ENST00000483538 PER1O15534 1290 aaPredicted RBP12.3□□□□□ -0.44
POLR1A-207ENST00000483538 HOXC9P31274 260 aa12.3□□□□□ -0.44
POLR1A-207ENST00000483538 AMER1Q5JTC6 1135 aaPredicted RBP12.3□□□□□ -0.44
POLR1A-207ENST00000483538 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
POLR1A-207ENST00000483538 IP6K1Q92551 441 aa12.3□□□□□ -0.44
POLR1A-207ENST00000483538 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
POLR1A-207ENST00000483538 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
POLR1A-207ENST00000483538 PKD1L3Q7Z443 1732 aa12.29□□□□□ -0.44
POLR1A-207ENST00000483538 EVA1CP58658 441 aa12.29□□□□□ -0.44
POLR1A-207ENST00000483538 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
POLR1A-207ENST00000483538 KIF24Q5T7B8 1368 aa12.29□□□□□ -0.44
POLR1A-207ENST00000483538 TCP11L2Q8N4U5 519 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 ANKRD24Q8TF21 1146 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 CARD10Q9BWT7 1032 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 INSRP06213 1382 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 FLT4P35916 1363 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
POLR1A-207ENST00000483538 MEGF6O75095 1541 aa12.27□□□□□ -0.44
POLR1A-207ENST00000483538 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.45
POLR1A-207ENST00000483538 THRAP3Q9Y2W1 955 aaKnown RBP12.27□□□□□ -0.45
POLR1A-207ENST00000483538 NHSQ6T4R5 1651 aa12.26□□□□□ -0.45
POLR1A-207ENST00000483538 RREB1Q92766 1687 aa12.26□□□□□ -0.45
POLR1A-207ENST00000483538 DOT1LQ8TEK3 1739 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 HSP90AB2PQ58FF8 381 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 KRT27Q7Z3Y8 459 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
POLR1A-207ENST00000483538 A0A0G2JS52 829 aa12.24□□□□□ -0.45
POLR1A-207ENST00000483538 RGPD3A6NKT7 1758 aaPredicted RBP12.24□□□□□ -0.45
POLR1A-207ENST00000483538 COL3A1P02461 1466 aaPredicted RBP12.24□□□□□ -0.45
POLR1A-207ENST00000483538 MYT1Q01538 1121 aa12.24□□□□□ -0.45
POLR1A-207ENST00000483538 RGPD4Q7Z3J3 1758 aa12.24□□□□□ -0.45
POLR1A-207ENST00000483538 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
POLR1A-207ENST00000483538 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
POLR1A-207ENST00000483538 TNNT2P45379 298 aaPredicted RBP12.23□□□□□ -0.45
POLR1A-207ENST00000483538 AMPHP49418 695 aa12.23□□□□□ -0.45
POLR1A-207ENST00000483538 LTV1Q96GA3 475 aaPredicted RBP12.23□□□□□ -0.45
POLR1A-207ENST00000483538 KNSTRNQ9Y448 316 aa12.23□□□□□ -0.45
POLR1A-207ENST00000483538 OVOS2A0A0G2JMS6 1433 aa12.22□□□□□ -0.45
POLR1A-207ENST00000483538 NLRP2Q9NX02 1062 aa12.22□□□□□ -0.45
POLR1A-207ENST00000483538 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
POLR1A-207ENST00000483538 BTAF1O14981 1849 aa12.21□□□□□ -0.45
POLR1A-207ENST00000483538 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.45
POLR1A-207ENST00000483538 NBPF4Q96M43 638 aa12.21□□□□□ -0.45
POLR1A-207ENST00000483538 BCL9O00512 1426 aa12.2□□□□□ -0.46
POLR1A-207ENST00000483538 MORC1Q86VD1 984 aa12.2□□□□□ -0.46
POLR1A-207ENST00000483538 USHBP1Q8N6Y0 703 aa12.2□□□□□ -0.46
POLR1A-207ENST00000483538 VIRMAQ69YN4 1812 aaKnown RBP12.19□□□□□ -0.46
POLR1A-207ENST00000483538 CC2D1BQ5T0F9 858 aaKnown RBP12.19□□□□□ -0.46
POLR1A-207ENST00000483538 MARCH10Q8NA82 808 aaPredicted RBP12.19□□□□□ -0.46
POLR1A-207ENST00000483538 ITGB4P16144 1822 aa12.18□□□□□ -0.46
POLR1A-207ENST00000483538 PPM1GO15355 546 aaPredicted RBP12.18□□□□□ -0.46
POLR1A-207ENST00000483538 IL2RBP14784 551 aa12.18□□□□□ -0.46
POLR1A-207ENST00000483538 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
POLR1A-207ENST00000483538 EIF4A2Q14240 407 aaKnown RBP12.18□□□□□ -0.46
POLR1A-207ENST00000483538 DDB1Q16531 1140 aa12.18□□□□□ -0.46
POLR1A-207ENST00000483538 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
POLR1A-207ENST00000483538 IGSF1Q8N6C5 1336 aa12.16□□□□□ -0.46
POLR1A-207ENST00000483538 PDE3BQ13370 1112 aa12.16□□□□□ -0.46
POLR1A-207ENST00000483538 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
POLR1A-207ENST00000483538 EYA1Q99502 592 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms