RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 LMO7Q8WWI1 1683 aa25.36■■□□□ 1.65
SMIM4-204ENST00000482728 CSB-PGBD3P0DP91 1061 aa25.35■■□□□ 1.65
SMIM4-204ENST00000482728 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
SMIM4-204ENST00000482728 MYOM1P52179 1685 aa25.34■■□□□ 1.65
SMIM4-204ENST00000482728 TCP11L2Q8N4U5 519 aa25.34■■□□□ 1.65
SMIM4-204ENST00000482728 PANK3Q9H999 370 aa25.34■■□□□ 1.65
SMIM4-204ENST00000482728 NSD3Q9BZ95 1437 aa25.34■■□□□ 1.65
SMIM4-204ENST00000482728 COL5A2P05997 1499 aaPredicted RBP25.34■■□□□ 1.65
SMIM4-204ENST00000482728 USP54Q70EL1 1684 aa25.33■■□□□ 1.65
SMIM4-204ENST00000482728 UPF1Q92900 1129 aaKnown RBP eCLIP25.33■■□□□ 1.65
SMIM4-204ENST00000482728 CGNL1Q0VF96 1302 aa25.33■■□□□ 1.64
SMIM4-204ENST00000482728 KRT27Q7Z3Y8 459 aa25.31■■□□□ 1.64
SMIM4-204ENST00000482728 THRAP3Q9Y2W1 955 aaKnown RBP25.31■■□□□ 1.64
SMIM4-204ENST00000482728 WDR17Q8IZU2 1322 aa25.31■■□□□ 1.64
SMIM4-204ENST00000482728 COL18A1P39060 1754 aa25.31■■□□□ 1.64
SMIM4-204ENST00000482728 BARGINQ6ZT62 677 aa25.3■■□□□ 1.64
SMIM4-204ENST00000482728 KIF7Q2M1P5 1343 aa25.3■■□□□ 1.64
SMIM4-204ENST00000482728 CRB1P82279 1406 aa25.29■■□□□ 1.64
SMIM4-204ENST00000482728 FBLN1P23142 703 aa25.29■■□□□ 1.64
SMIM4-204ENST00000482728 AMPHP49418 695 aa25.29■■□□□ 1.64
SMIM4-204ENST00000482728 IP6K1Q92551 441 aa25.28■■□□□ 1.64
SMIM4-204ENST00000482728 MAP3K19Q56UN5 1328 aa25.26■■□□□ 1.63
SMIM4-204ENST00000482728 CARD10Q9BWT7 1032 aa25.25■■□□□ 1.63
SMIM4-204ENST00000482728 ABCC6O95255 1503 aa25.25■■□□□ 1.63
SMIM4-204ENST00000482728 RGPD5Q99666 1765 aa25.25■■□□□ 1.63
SMIM4-204ENST00000482728 BRWD3Q6RI45 1802 aa25.24■■□□□ 1.63
SMIM4-204ENST00000482728 LTN1O94822 1766 aa25.24■■□□□ 1.63
SMIM4-204ENST00000482728 RRS1Q15050 365 aaKnown RBP25.24■■□□□ 1.63
SMIM4-204ENST00000482728 ANKRD24Q8TF21 1146 aa25.24■■□□□ 1.63
SMIM4-204ENST00000482728 NLRP2Q9NX02 1062 aa25.24■■□□□ 1.63
SMIM4-204ENST00000482728 KNSTRNQ9Y448 316 aa25.24■■□□□ 1.63
SMIM4-204ENST00000482728 KIF20BQ96Q89 1820 aa25.23■■□□□ 1.63
SMIM4-204ENST00000482728 PDE3BQ13370 1112 aa25.23■■□□□ 1.63
SMIM4-204ENST00000482728 ERBB3P21860 1342 aa25.22■■□□□ 1.63
SMIM4-204ENST00000482728 LTV1Q96GA3 475 aaPredicted RBP25.22■■□□□ 1.63
SMIM4-204ENST00000482728 HOXC9P31274 260 aa25.21■■□□□ 1.63
SMIM4-204ENST00000482728 CCDC125Q86Z20 511 aa25.21■■□□□ 1.63
SMIM4-204ENST00000482728 BLMP54132 1417 aaPredicted RBP25.2■■□□□ 1.63
SMIM4-204ENST00000482728 CDCA7Q9BWT1 371 aaPredicted RBP25.2■■□□□ 1.62
SMIM4-204ENST00000482728 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
SMIM4-204ENST00000482728 THSD7AQ9UPZ6 1657 aa25.18■■□□□ 1.62
SMIM4-204ENST00000482728 FAM182BQ5T319 152 aa25.18■■□□□ 1.62
SMIM4-204ENST00000482728 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
SMIM4-204ENST00000482728 PPM1GO15355 546 aaPredicted RBP25.16■■□□□ 1.62
SMIM4-204ENST00000482728 TNNT2P45379 298 aaPredicted RBP25.16■■□□□ 1.62
SMIM4-204ENST00000482728 SF3B2Q13435 895 aaKnown RBP25.16■■□□□ 1.62
SMIM4-204ENST00000482728 DDB1Q16531 1140 aa25.16■■□□□ 1.62
SMIM4-204ENST00000482728 RTL1A6NKG5 1358 aa25.16■■□□□ 1.62
SMIM4-204ENST00000482728 FAM196AQ6ZSG2 479 aa25.14■■□□□ 1.62
SMIM4-204ENST00000482728 MORC1Q86VD1 984 aa25.14■■□□□ 1.62
SMIM4-204ENST00000482728 NSD2O96028 1365 aa25.14■■□□□ 1.61
SMIM4-204ENST00000482728 HSP90AB2PQ58FF8 381 aa25.13■■□□□ 1.61
SMIM4-204ENST00000482728 EMILIN1Q9Y6C2 1016 aa25.13■■□□□ 1.61
SMIM4-204ENST00000482728 KIF24Q5T7B8 1368 aa25.13■■□□□ 1.61
SMIM4-204ENST00000482728 EXOC5O00471 708 aa25.12■■□□□ 1.61
SMIM4-204ENST00000482728 FLT4P35916 1363 aa25.11■■□□□ 1.61
SMIM4-204ENST00000482728 EP400Q96L91 3159 aa25.1■■□□□ 1.61
SMIM4-204ENST00000482728 IL2RBP14784 551 aa25.1■■□□□ 1.61
SMIM4-204ENST00000482728 INSRP06213 1382 aa25.09■■□□□ 1.61
SMIM4-204ENST00000482728 POLKQ9UBT6 870 aa25.09■■□□□ 1.61
SMIM4-204ENST00000482728 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
SMIM4-204ENST00000482728 PER1O15534 1290 aaPredicted RBP25.08■■□□□ 1.61
SMIM4-204ENST00000482728 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
SMIM4-204ENST00000482728 AMER1Q5JTC6 1135 aaPredicted RBP25.08■■□□□ 1.61
SMIM4-204ENST00000482728 PARP4Q9UKK3 1724 aaKnown RBP25.06■■□□□ 1.6
SMIM4-204ENST00000482728 MAP2P11137 1827 aaKnown RBP25.06■■□□□ 1.6
SMIM4-204ENST00000482728 NBPF6Q5VWK0 638 aa25.05■■□□□ 1.6
SMIM4-204ENST00000482728 NBPF4Q96M43 638 aa25.05■■□□□ 1.6
SMIM4-204ENST00000482728 DISP2A7MBM2 1401 aa25.04■■□□□ 1.6
SMIM4-204ENST00000482728 ANKRD26Q9UPS8 1709 aa25.04■■□□□ 1.6
SMIM4-204ENST00000482728 TRIM37O94972 964 aa25.04■■□□□ 1.6
SMIM4-204ENST00000482728 CC2D1BQ5T0F9 858 aaKnown RBP25.03■■□□□ 1.6
SMIM4-204ENST00000482728 MARCH10Q8NA82 808 aaPredicted RBP25.03■■□□□ 1.6
SMIM4-204ENST00000482728 FAM208AQ9UK61 1670 aaKnown RBP25.02■■□□□ 1.6
SMIM4-204ENST00000482728 BAG6P46379 1132 aa25.02■■□□□ 1.6
SMIM4-204ENST00000482728 PEAK1Q9H792 1746 aa25.01■■□□□ 1.59
SMIM4-204ENST00000482728 CNGB1Q14028 1251 aaPredicted RBP25.01■■□□□ 1.59
SMIM4-204ENST00000482728 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
SMIM4-204ENST00000482728 USHBP1Q8N6Y0 703 aa25■■□□□ 1.59
SMIM4-204ENST00000482728 RAPGEF4Q8WZA2 1011 aa25■■□□□ 1.59
SMIM4-204ENST00000482728 OVOS2A0A0G2JMS6 1433 aa25■■□□□ 1.59
SMIM4-204ENST00000482728 LRRC37A3O60309 1634 aa24.99■■□□□ 1.59
SMIM4-204ENST00000482728 WNK3Q9BYP7 1800 aa24.99■■□□□ 1.59
SMIM4-204ENST00000482728 TNS2Q63HR2 1409 aa24.96■■□□□ 1.59
SMIM4-204ENST00000482728 RGPD2P0DJD1 1756 aa24.96■■□□□ 1.59
SMIM4-204ENST00000482728 APBA3O96018 575 aa24.96■■□□□ 1.59
SMIM4-204ENST00000482728 TATP17735 454 aaPredicted RBP24.96■■□□□ 1.59
SMIM4-204ENST00000482728 ZCRB1Q8TBF4 217 aaKnown RBP24.96■■□□□ 1.59
SMIM4-204ENST00000482728 DDX54Q8TDD1 881 aaKnown RBP24.96■■□□□ 1.59
SMIM4-204ENST00000482728 NPC1L1Q9UHC9 1359 aa24.95■■□□□ 1.59
SMIM4-204ENST00000482728 EN1Q05925 392 aaPredicted RBP24.94■■□□□ 1.58
SMIM4-204ENST00000482728 EIF4A2Q14240 407 aaKnown RBP24.94■■□□□ 1.58
SMIM4-204ENST00000482728 RGPD1P0DJD0 1748 aa24.93■■□□□ 1.58
SMIM4-204ENST00000482728 EYA1Q99502 592 aa24.93■■□□□ 1.58
SMIM4-204ENST00000482728 KAT6BQ8WYB5 2073 aa24.92■■□□□ 1.58
SMIM4-204ENST00000482728 BCL11BQ9C0K0 894 aaPredicted RBP24.92■■□□□ 1.58
SMIM4-204ENST00000482728 MTHFSP49914 203 aa24.91■■□□□ 1.58
SMIM4-204ENST00000482728 BCL9O00512 1426 aa24.9■■□□□ 1.58
SMIM4-204ENST00000482728 MEGF6O75095 1541 aa24.88■■□□□ 1.57
SMIM4-204ENST00000482728 ACSBG1Q96GR2 724 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms