RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
DDX39B-220ENST00000482195 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 PLEKHG3A1L390 1219 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 NLRP13Q86W25 1043 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 CABP2Q9NPB3 220 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 AKAP12Q02952 1782 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 SBF2Q86WG5 1849 aa14.92□□□□□ -0.02
DDX39B-220ENST00000482195 NBPF1Q3BBV0 1214 aa14.91□□□□□ -0.02
DDX39B-220ENST00000482195 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
DDX39B-220ENST00000482195 PIK3C2AO00443 1686 aa14.9□□□□□ -0.02
DDX39B-220ENST00000482195 RGPD5Q99666 1765 aa14.9□□□□□ -0.02
DDX39B-220ENST00000482195 CRB1P82279 1406 aa14.9□□□□□ -0.02
DDX39B-220ENST00000482195 RGPD3A6NKT7 1758 aaPredicted RBP14.89□□□□□ -0.03
DDX39B-220ENST00000482195 RGPD4Q7Z3J3 1758 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 GCP02774 474 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 THRAP3Q9Y2W1 955 aaKnown RBP14.89□□□□□ -0.03
DDX39B-220ENST00000482195 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 OVOS2A0A0J9YW53 1432 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 OVOS2Q6IE36 1432 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 PEAK1Q9H792 1746 aa14.89□□□□□ -0.03
DDX39B-220ENST00000482195 SLIT3O75094 1523 aa14.88□□□□□ -0.03
DDX39B-220ENST00000482195 VASPP50552 380 aaPredicted RBP14.88□□□□□ -0.03
DDX39B-220ENST00000482195 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
DDX39B-220ENST00000482195 PPP1R1BQ9UD71 204 aaPredicted RBP14.88□□□□□ -0.03
DDX39B-220ENST00000482195 USP6P35125 1406 aa14.88□□□□□ -0.03
DDX39B-220ENST00000482195 ABCB7O75027 752 aa14.87□□□□□ -0.03
DDX39B-220ENST00000482195 NLRP6P59044 892 aa14.87□□□□□ -0.03
DDX39B-220ENST00000482195 TRPM1Q7Z4N2 1603 aa14.87□□□□□ -0.03
DDX39B-220ENST00000482195 TOM1L2Q6ZVM7 507 aa14.86□□□□□ -0.03
DDX39B-220ENST00000482195 BRD4O60885 1362 aaPredicted RBP14.85□□□□□ -0.03
DDX39B-220ENST00000482195 COL18A1P39060 1754 aa14.85□□□□□ -0.03
DDX39B-220ENST00000482195 CABP1Q9NZU7 370 aa14.85□□□□□ -0.03
DDX39B-220ENST00000482195 ZBTB12Q9Y330 459 aaPredicted RBP14.85□□□□□ -0.03
DDX39B-220ENST00000482195 SOX12O15370 315 aa14.84□□□□□ -0.03
DDX39B-220ENST00000482195 DDB1Q16531 1140 aa14.84□□□□□ -0.03
DDX39B-220ENST00000482195 C11orf95C9JLR9 678 aaPredicted RBP14.83□□□□□ -0.04
DDX39B-220ENST00000482195 SPON1Q9HCB6 807 aa14.83□□□□□ -0.04
DDX39B-220ENST00000482195 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
DDX39B-220ENST00000482195 CPSF1Q10570 1443 aaKnown RBP14.83□□□□□ -0.04
DDX39B-220ENST00000482195 CSB-PGBD3P0DP91 1061 aa14.82□□□□□ -0.04
DDX39B-220ENST00000482195 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
DDX39B-220ENST00000482195 CASZ1Q86V15 1759 aa14.82□□□□□ -0.04
DDX39B-220ENST00000482195 YY1P25490 414 aa14.81□□□□□ -0.04
DDX39B-220ENST00000482195 KAT6BQ8WYB5 2073 aa14.81□□□□□ -0.04
DDX39B-220ENST00000482195 KCNQ2O43526 872 aa14.8□□□□□ -0.04
DDX39B-220ENST00000482195 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
DDX39B-220ENST00000482195 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
DDX39B-220ENST00000482195 MYOM1P52179 1685 aa14.79□□□□□ -0.04
DDX39B-220ENST00000482195 MON2Q7Z3U7 1717 aa14.79□□□□□ -0.04
DDX39B-220ENST00000482195 BCL11BQ9C0K0 894 aaPredicted RBP14.79□□□□□ -0.04
DDX39B-220ENST00000482195 LTN1O94822 1766 aa14.78□□□□□ -0.04
DDX39B-220ENST00000482195 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
DDX39B-220ENST00000482195 IFNLR1Q8IU57 520 aaPredicted RBP14.78□□□□□ -0.04
DDX39B-220ENST00000482195 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
DDX39B-220ENST00000482195 TTC21BQ7Z4L5 1316 aa14.77□□□□□ -0.04
DDX39B-220ENST00000482195 L3MBTL2Q969R5 705 aa14.77□□□□□ -0.05
DDX39B-220ENST00000482195 AXIN2Q9Y2T1 843 aa14.77□□□□□ -0.05
DDX39B-220ENST00000482195 NFAT5O94916 1531 aa14.76□□□□□ -0.05
DDX39B-220ENST00000482195 PTF1AQ7RTS3 328 aa14.76□□□□□ -0.05
DDX39B-220ENST00000482195 KCNH5Q8NCM2 988 aa14.76□□□□□ -0.05
DDX39B-220ENST00000482195 CDCA7Q9BWT1 371 aaPredicted RBP14.76□□□□□ -0.05
DDX39B-220ENST00000482195 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
DDX39B-220ENST00000482195 NHSQ6T4R5 1651 aa14.75□□□□□ -0.05
DDX39B-220ENST00000482195 PLSCR1O15162 318 aa14.75□□□□□ -0.05
DDX39B-220ENST00000482195 MARCH10Q8NA82 808 aaPredicted RBP14.75□□□□□ -0.05
DDX39B-220ENST00000482195 TTC21AQ8NDW8 1320 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 ZBTB7AO95365 584 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 NEUROD1Q13562 356 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 ABCC6O95255 1503 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 TNS2Q63HR2 1409 aa14.74□□□□□ -0.05
DDX39B-220ENST00000482195 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
DDX39B-220ENST00000482195 CARD10Q9BWT7 1032 aa14.73□□□□□ -0.05
DDX39B-220ENST00000482195 STK32BQ9NY57 414 aa14.73□□□□□ -0.05
DDX39B-220ENST00000482195 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
DDX39B-220ENST00000482195 USP54Q70EL1 1684 aa14.72□□□□□ -0.05
DDX39B-220ENST00000482195 BTAF1O14981 1849 aa14.72□□□□□ -0.05
DDX39B-220ENST00000482195 EXOC5O00471 708 aa14.72□□□□□ -0.05
DDX39B-220ENST00000482195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
DDX39B-220ENST00000482195 SIN3AQ96ST3 1273 aa14.72□□□□□ -0.05
DDX39B-220ENST00000482195 DSG3P32926 999 aa14.71□□□□□ -0.05
DDX39B-220ENST00000482195 PDGFDQ9GZP0 370 aaPredicted RBP14.71□□□□□ -0.05
DDX39B-220ENST00000482195 BCL9O00512 1426 aa14.71□□□□□ -0.05
DDX39B-220ENST00000482195 TXNRD1Q16881 649 aa14.7□□□□□ -0.06
DDX39B-220ENST00000482195 ACSBG1Q96GR2 724 aa14.7□□□□□ -0.06
DDX39B-220ENST00000482195 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
DDX39B-220ENST00000482195 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
DDX39B-220ENST00000482195 CHD4Q14839 1912 aa14.68□□□□□ -0.06
DDX39B-220ENST00000482195 SLC15A2Q16348 729 aa14.67□□□□□ -0.06
DDX39B-220ENST00000482195 NME9Q86XW9 330 aa14.67□□□□□ -0.06
DDX39B-220ENST00000482195 ERBB3P21860 1342 aa14.66□□□□□ -0.06
DDX39B-220ENST00000482195 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
DDX39B-220ENST00000482195 FAM208AQ9UK61 1670 aaKnown RBP14.66□□□□□ -0.06
DDX39B-220ENST00000482195 HDGFL2Q7Z4V5 671 aaPredicted RBP14.65□□□□□ -0.06
DDX39B-220ENST00000482195 UTRNP46939 3433 aa14.64□□□□□ -0.07
DDX39B-220ENST00000482195 IL2RBP14784 551 aa14.64□□□□□ -0.07
DDX39B-220ENST00000482195 PTGER2P43116 358 aa14.64□□□□□ -0.07
DDX39B-220ENST00000482195 ANKRD24Q8TF21 1146 aa14.64□□□□□ -0.07
DDX39B-220ENST00000482195 CARD11Q9BXL7 1154 aa14.64□□□□□ -0.07
DDX39B-220ENST00000482195 FHDC1Q9C0D6 1143 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms