RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
CUL3-209ENST00000481135 PHTF2Q8N3S3 785 aa16.18■□□□□ 0.18
CUL3-209ENST00000481135 VRTNQ9H8Y1 702 aa16.18■□□□□ 0.18
CUL3-209ENST00000481135 EHBP1Q8NDI1 1231 aa16.17■□□□□ 0.18
CUL3-209ENST00000481135 USP17L3A6NCW0 530 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 USP17L4A6NCW7 530 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 SRPK2P78362 688 aaKnown RBP16.16■□□□□ 0.18
CUL3-209ENST00000481135 SKOR1P84550 965 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 USP17L2Q6R6M4 530 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 USP17L1Q7RTZ2 530 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 PLPP7Q8NBV4 271 aa16.16■□□□□ 0.18
CUL3-209ENST00000481135 GIGYF1O75420 1035 aaPredicted RBP16.14■□□□□ 0.17
CUL3-209ENST00000481135 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
CUL3-209ENST00000481135 SLC19A1P41440 591 aa16.13■□□□□ 0.17
CUL3-209ENST00000481135 LIAT1Q6ZQX7 453 aa16.13■□□□□ 0.17
CUL3-209ENST00000481135 CSB-PGBD3P0DP91 1061 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 EML3Q32P44 896 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
CUL3-209ENST00000481135 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 PLA2G2EQ9NZK7 142 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 CHIC2Q9UKJ5 165 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 DOLKQ9UPQ8 538 aa16.12■□□□□ 0.17
CUL3-209ENST00000481135 MAP4K5Q9Y4K4 846 aa16.11■□□□□ 0.17
CUL3-209ENST00000481135 ATG7O95352 703 aa16.1■□□□□ 0.17
CUL3-209ENST00000481135 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
CUL3-209ENST00000481135 VASH1Q7L8A9 365 aaPredicted RBP16.1■□□□□ 0.17
CUL3-209ENST00000481135 DEPDC4Q8N2C3 294 aa16.1■□□□□ 0.17
CUL3-209ENST00000481135 ESPNB1AK53 854 aa16.09■□□□□ 0.17
CUL3-209ENST00000481135 ATP5J2-PTCD1G3V325 749 aa16.09■□□□□ 0.17
CUL3-209ENST00000481135 NCOA4Q13772 614 aa16.09■□□□□ 0.17
CUL3-209ENST00000481135 KANK4Q5T7N3 995 aaPredicted RBP16.09■□□□□ 0.17
CUL3-209ENST00000481135 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
CUL3-209ENST00000481135 KCTD15Q96SI1 283 aaPredicted RBP16.09■□□□□ 0.17
CUL3-209ENST00000481135 MKRN1Q9UHC7 482 aaKnown RBP16.08■□□□□ 0.16
CUL3-209ENST00000481135 SIRT1Q96EB6 747 aa16.07■□□□□ 0.16
CUL3-209ENST00000481135 TRAIPQ9BWF2 469 aa16.07■□□□□ 0.16
CUL3-209ENST00000481135 ARID5BQ14865 1188 aa16.06■□□□□ 0.16
CUL3-209ENST00000481135 TRAF7Q6Q0C0 670 aa16.06■□□□□ 0.16
CUL3-209ENST00000481135 TRIM50Q86XT4 487 aa16.06■□□□□ 0.16
CUL3-209ENST00000481135 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
CUL3-209ENST00000481135 NOD1Q9Y239 953 aa16.06■□□□□ 0.16
CUL3-209ENST00000481135 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
CUL3-209ENST00000481135 LARP1Q6PKG0 1096 aaKnown RBP16.05■□□□□ 0.16
CUL3-209ENST00000481135 A0A0G2JS52 829 aa16.04■□□□□ 0.16
CUL3-209ENST00000481135 MPNDQ8N594 471 aa16.04■□□□□ 0.16
CUL3-209ENST00000481135 CDK15Q96Q40 435 aa16.04■□□□□ 0.16
CUL3-209ENST00000481135 WNT7AO00755 349 aa16.03■□□□□ 0.16
CUL3-209ENST00000481135 ATP1A2P50993 1020 aa16.03■□□□□ 0.16
CUL3-209ENST00000481135 OXLD1Q5BKU9 147 aa16.03■□□□□ 0.16
CUL3-209ENST00000481135 PCDHB11Q9Y5F2 797 aa16.03■□□□□ 0.16
CUL3-209ENST00000481135 USP4Q13107 963 aa16.02■□□□□ 0.16
CUL3-209ENST00000481135 SPRYD7Q5W111 196 aa16.02■□□□□ 0.16
CUL3-209ENST00000481135 EMID1Q96A84 441 aaPredicted RBP16.02■□□□□ 0.16
CUL3-209ENST00000481135 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
CUL3-209ENST00000481135 RASA1P20936 1047 aa16.01■□□□□ 0.15
CUL3-209ENST00000481135 RAB15P59190 212 aa16.01■□□□□ 0.15
CUL3-209ENST00000481135 ELOAQ14241 798 aaKnown RBP16.01■□□□□ 0.15
CUL3-209ENST00000481135 TSGA10IPQ3SY00 556 aa16.01■□□□□ 0.15
CUL3-209ENST00000481135 DHX9Q08211 1270 aaKnown RBP16■□□□□ 0.15
CUL3-209ENST00000481135 INTS6LQ5JSJ4 861 aaKnown RBP15.99■□□□□ 0.15
CUL3-209ENST00000481135 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
CUL3-209ENST00000481135 ZNF598Q86UK7 904 aaKnown RBP15.98■□□□□ 0.15
CUL3-209ENST00000481135 SIAH2O43255 324 aa15.97■□□□□ 0.15
CUL3-209ENST00000481135 MYCP01106 439 aaPredicted RBP15.97■□□□□ 0.15
CUL3-209ENST00000481135 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
CUL3-209ENST00000481135 MRGPRX2Q96LB1 330 aa15.97■□□□□ 0.15
CUL3-209ENST00000481135 V9GY48 417 aaPredicted RBP15.97■□□□□ 0.15
CUL3-209ENST00000481135 USP17L15C9J2P7 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L10C9JJH3 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L13C9JLJ4 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L12C9JPN9 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L11C9JVI0 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L21D6R901 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L18D6R9N7 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L22D6RA61 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L17D6RBQ6 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L19D6RCP7 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L20D6RJB6 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 FSHRP23945 695 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 USP17L24Q0WX57 530 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 OGFOD1Q8N543 542 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 DNAAF2Q9NVR5 837 aaKnown RBP15.96■□□□□ 0.15
CUL3-209ENST00000481135 NOVA2Q9UNW9 492 aaKnown RBP15.96■□□□□ 0.15
CUL3-209ENST00000481135 TLL2Q9Y6L7 1015 aa15.96■□□□□ 0.15
CUL3-209ENST00000481135 ADH1CP00326 375 aa15.95■□□□□ 0.14
CUL3-209ENST00000481135 NR5A1Q13285 461 aa15.95■□□□□ 0.14
CUL3-209ENST00000481135 KCTD17Q8N5Z5 321 aa15.95■□□□□ 0.14
CUL3-209ENST00000481135 CDCA7Q9BWT1 371 aaPredicted RBP15.95■□□□□ 0.14
CUL3-209ENST00000481135 RBM19Q9Y4C8 960 aaKnown RBP15.95■□□□□ 0.14
CUL3-209ENST00000481135 ERVH48-1M5A8F1 160 aa15.94■□□□□ 0.14
CUL3-209ENST00000481135 LARGE2Q8N3Y3 721 aa15.94■□□□□ 0.14
CUL3-209ENST00000481135 PRKD2Q9BZL6 878 aa15.94■□□□□ 0.14
CUL3-209ENST00000481135 GRM5P41594 1212 aa15.93■□□□□ 0.14
CUL3-209ENST00000481135 GTF2IP78347 998 aa15.93■□□□□ 0.14
CUL3-209ENST00000481135 PTK7Q13308 1070 aa15.93■□□□□ 0.14
CUL3-209ENST00000481135 CRTC2Q53ET0 693 aaPredicted RBP15.93■□□□□ 0.14
CUL3-209ENST00000481135 FAM200AQ8TCP9 573 aa15.92■□□□□ 0.14
CUL3-209ENST00000481135 CCDC116Q8IYX3 515 aa15.91■□□□□ 0.14
CUL3-209ENST00000481135 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
CUL3-209ENST00000481135 PSME1Q06323 249 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms