RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 AEBP2Q6ZN18 517 aaPredicted RBP39.74■■■■□ 3.95
CUL3-209ENST00000481135 CHIC1Q5VXU3 224 aa39.58■■■■□ 3.93
CUL3-209ENST00000481135 PHF23Q9BUL5 403 aaPredicted RBP34.78■■■■□ 3.16
CUL3-209ENST00000481135 SENP3Q9H4L4 574 aaPredicted RBP33.81■■■■□ 3
CUL3-209ENST00000481135 PLPPR3Q6T4P5 718 aa32.51■■■□□ 2.79
CUL3-209ENST00000481135 FOXD1Q16676 465 aa31.18■■■□□ 2.58
CUL3-209ENST00000481135 ADRA2BP18089 450 aa30.52■■■□□ 2.48
CUL3-209ENST00000481135 PPP6R1Q9UPN7 881 aa30.46■■■□□ 2.47
CUL3-209ENST00000481135 PIAS4Q8N2W9 510 aaPredicted RBP29.64■■■□□ 2.34
CUL3-209ENST00000481135 KCNA4P22459 653 aa28.7■■■□□ 2.18
CUL3-209ENST00000481135 PPP4R3CPQ6ZMV5 832 aa28.68■■■□□ 2.18
CUL3-209ENST00000481135 MSH5O43196 834 aa28.64■■■□□ 2.18
CUL3-209ENST00000481135 NCBP3Q53F19 620 aaKnown RBP28.25■■■□□ 2.11
CUL3-209ENST00000481135 SCAF1Q9H7N4 1312 aaKnown RBP28.13■■■□□ 2.09
CUL3-209ENST00000481135 CNKSR2Q8WXI2 1034 aa27.78■■■□□ 2.04
CUL3-209ENST00000481135 NPM3O75607 178 aaKnown RBP27.67■■■□□ 2.02
CUL3-209ENST00000481135 SLC4A1APQ9BWU0 796 aaKnown RBP27.54■■■□□ 2
CUL3-209ENST00000481135 MAPK8IP2Q13387 824 aaPredicted RBP27.46■■□□□ 1.99
CUL3-209ENST00000481135 EHMT2Q96KQ7 1210 aa27.46■■□□□ 1.99
CUL3-209ENST00000481135 RNF216Q9NWF9 866 aaPredicted RBP27.06■■□□□ 1.92
CUL3-209ENST00000481135 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
CUL3-209ENST00000481135 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
CUL3-209ENST00000481135 CSRNP3Q8WYN3 585 aa26.81■■□□□ 1.88
CUL3-209ENST00000481135 HOXD11P31277 338 aaPredicted RBP26.74■■□□□ 1.87
CUL3-209ENST00000481135 ZBTB22O15209 634 aa26.34■■□□□ 1.81
CUL3-209ENST00000481135 FOXD4L1Q9NU39 408 aa26.31■■□□□ 1.8
CUL3-209ENST00000481135 SLC4A2P04920 1241 aa25.92■■□□□ 1.74
CUL3-209ENST00000481135 DCAF8L1A6NGE4 600 aa25.89■■□□□ 1.74
CUL3-209ENST00000481135 MYCNP04198 464 aaPredicted RBP25.64■■□□□ 1.7
CUL3-209ENST00000481135 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.56■■□□□ 1.683e-6■□□□□ 11.3
CUL3-209ENST00000481135 ATXN8OSP0DMR3 200 aa25.39■■□□□ 1.66
CUL3-209ENST00000481135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.22■■□□□ 1.63
CUL3-209ENST00000481135 HNRNPUL2Q1KMD3 747 aaKnown RBP25.22■■□□□ 1.63
CUL3-209ENST00000481135 U3KPZ7 1027 aaPredicted RBP25.11■■□□□ 1.61
CUL3-209ENST00000481135 SAMD1Q6SPF0 538 aaPredicted RBP25.1■■□□□ 1.61
CUL3-209ENST00000481135 APLP2Q06481 763 aa24.85■■□□□ 1.57
CUL3-209ENST00000481135 POTEDQ86YR6 584 aa24.79■■□□□ 1.56
CUL3-209ENST00000481135 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
CUL3-209ENST00000481135 RNF39Q9H2S5 420 aa24.51■■□□□ 1.51
CUL3-209ENST00000481135 ZNF219Q9P2Y4 722 aaPredicted RBP24.42■■□□□ 1.5
CUL3-209ENST00000481135 C1QBPQ07021 282 aaKnown RBP24.34■■□□□ 1.49
CUL3-209ENST00000481135 FKBP8Q14318 412 aa24.26■■□□□ 1.47
CUL3-209ENST00000481135 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
CUL3-209ENST00000481135 SPINK5Q9NQ38 1064 aaPredicted RBP24.19■■□□□ 1.46
CUL3-209ENST00000481135 CAPN15O75808 1086 aa24.18■■□□□ 1.46
CUL3-209ENST00000481135 POLA2Q14181 598 aa23.94■■□□□ 1.42
CUL3-209ENST00000481135 FBLN2P98095 1184 aa23.89■■□□□ 1.41
CUL3-209ENST00000481135 ZBTB12Q9Y330 459 aaPredicted RBP23.73■■□□□ 1.39
CUL3-209ENST00000481135 MKRN4PQ13434 485 aaPredicted RBP23.72■■□□□ 1.39
CUL3-209ENST00000481135 ABCB7O75027 752 aa23.7■■□□□ 1.38
CUL3-209ENST00000481135 SPDYE4A6NLX3 237 aa23.63■■□□□ 1.37
CUL3-209ENST00000481135 DSG3P32926 999 aa23.55■■□□□ 1.36
CUL3-209ENST00000481135 CACNB1Q02641 598 aaPredicted RBP23.46■■□□□ 1.35
CUL3-209ENST00000481135 AMER1Q5JTC6 1135 aaPredicted RBP23.35■■□□□ 1.33
CUL3-209ENST00000481135 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
CUL3-209ENST00000481135 PROM2Q8N271 834 aa23.27■■□□□ 1.32
CUL3-209ENST00000481135 RTN4Q9NQC3 1192 aaKnown RBP23.15■■□□□ 1.3
CUL3-209ENST00000481135 SPDYE2BA6NHP3 402 aa23.08■■□□□ 1.29
CUL3-209ENST00000481135 SPDYE6P0CI01 402 aa23.08■■□□□ 1.29
CUL3-209ENST00000481135 SPDYE2Q495Y8 402 aa23.08■■□□□ 1.29
CUL3-209ENST00000481135 ZNF692Q9BU19 519 aaPredicted RBP23.08■■□□□ 1.29
CUL3-209ENST00000481135 OSCARQ8IYS5 282 aa23.07■■□□□ 1.28
CUL3-209ENST00000481135 VASPP50552 380 aaPredicted RBP22.89■■□□□ 1.25
CUL3-209ENST00000481135 SSUH2Q9Y2M2 353 aa22.89■■□□□ 1.25
CUL3-209ENST00000481135 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
CUL3-209ENST00000481135 STAG3Q9UJ98 1225 aa22.71■■□□□ 1.23
CUL3-209ENST00000481135 IFNLR1Q8IU57 520 aaPredicted RBP22.57■■□□□ 1.2
CUL3-209ENST00000481135 RBM42Q9BTD8 480 aaKnown RBP22.56■■□□□ 1.2
CUL3-209ENST00000481135 PLCD3Q8N3E9 789 aa22.44■■□□□ 1.18
CUL3-209ENST00000481135 KLHL34Q8N239 644 aa22.43■■□□□ 1.18
CUL3-209ENST00000481135 MIER1Q8N108 512 aa22.38■■□□□ 1.17
CUL3-209ENST00000481135 AKT1S1Q96B36 256 aa22.37■■□□□ 1.17
CUL3-209ENST00000481135 PLEKHG5O94827 1062 aa22.35■■□□□ 1.17
CUL3-209ENST00000481135 SPOCK2Q92563 424 aa22.3■■□□□ 1.16
CUL3-209ENST00000481135 SPDYE1Q8NFV5 336 aaPredicted RBP22.26■■□□□ 1.15
CUL3-209ENST00000481135 ZBTB47Q9UFB7 747 aaPredicted RBP22.23■■□□□ 1.15
CUL3-209ENST00000481135 REM2Q8IYK8 340 aaPredicted RBP22.1■■□□□ 1.13
CUL3-209ENST00000481135 CLEC11AQ9Y240 323 aa22.09■■□□□ 1.13
CUL3-209ENST00000481135 SLC24A1O60721 1099 aa22.08■■□□□ 1.13
CUL3-209ENST00000481135 PKD2Q13563 968 aa22.06■■□□□ 1.12
CUL3-209ENST00000481135 PRR29P0C7W0 189 aa22.01■■□□□ 1.11
CUL3-209ENST00000481135 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
CUL3-209ENST00000481135 ECM2O94769 699 aaPredicted RBP21.91■■□□□ 1.1
CUL3-209ENST00000481135 CIZ1Q9ULV3 898 aaPredicted RBP21.84■■□□□ 1.09
CUL3-209ENST00000481135 PITPNM1O00562 1244 aa21.81■■□□□ 1.08
CUL3-209ENST00000481135 CREBZFQ9NS37 354 aa21.78■■□□□ 1.08
CUL3-209ENST00000481135 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
CUL3-209ENST00000481135 GSE1Q14687 1217 aa21.72■■□□□ 1.07
CUL3-209ENST00000481135 NUBP1P53384 320 aa21.64■■□□□ 1.05
CUL3-209ENST00000481135 NPM1P06748 294 aaKnown RBP eCLIP21.6■■□□□ 1.05
CUL3-209ENST00000481135 MNX1P50219 401 aaPredicted RBP21.6■■□□□ 1.05
CUL3-209ENST00000481135 DCAF8Q5TAQ9 597 aa21.59■■□□□ 1.05
CUL3-209ENST00000481135 RGL2O15211 777 aa21.58■■□□□ 1.05
CUL3-209ENST00000481135 FAM212AQ96EL1 285 aa21.58■■□□□ 1.05
CUL3-209ENST00000481135 PLCB2Q00722 1185 aa21.53■■□□□ 1.04
CUL3-209ENST00000481135 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.44■■□□□ 1.02
CUL3-209ENST00000481135 BBXQ8WY36 941 aaPredicted RBP21.43■■□□□ 1.02
CUL3-209ENST00000481135 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
CUL3-209ENST00000481135 RASEFQ8IZ41 740 aa21.39■■□□□ 1.01
CUL3-209ENST00000481135 TAOK2Q9UL54 1235 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms