RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 SATB1Q01826 763 aa10.59□□□□□ -0.71
TTC3-216ENST00000479930 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
TTC3-216ENST00000479930 CACYBPQ9HB71 228 aaKnown RBP10.59□□□□□ -0.71
TTC3-216ENST00000479930 RPGRQ92834 1020 aaKnown RBP10.59□□□□□ -0.71
TTC3-216ENST00000479930 CLUAP1Q96AJ1 413 aa10.59□□□□□ -0.71
TTC3-216ENST00000479930 CUL4BQ13620 913 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 TMCO5BA8MYB1 307 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 CETN2P41208 172 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 DPH6Q7L8W6 267 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 CKAP2LQ8IYA6 745 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 CUL5Q93034 780 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 HDAC9Q9UKV0 1011 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 MPHOSPH8Q99549 860 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
TTC3-216ENST00000479930 BANK1Q8NDB2 785 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 PKD2Q13563 968 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 MACROD2A1Z1Q3 448 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 POLR3DP05423 398 aaPredicted RBP10.58□□□□□ -0.72
TTC3-216ENST00000479930 UBE4AQ14139 1066 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
TTC3-216ENST00000479930 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
TTC3-216ENST00000479930 EAPPQ56P03 285 aaPredicted RBP10.57□□□□□ -0.72
TTC3-216ENST00000479930 RAI14Q9P0K7 980 aa10.57□□□□□ -0.72
TTC3-216ENST00000479930 BMP2KQ9NSY1 1161 aaPredicted RBP10.57□□□□□ -0.72
TTC3-216ENST00000479930 KIF22Q14807 665 aa10.56□□□□□ -0.72
TTC3-216ENST00000479930 MNS1Q8NEH6 495 aa10.56□□□□□ -0.72
TTC3-216ENST00000479930 CABP4P57796 275 aa10.56□□□□□ -0.72
TTC3-216ENST00000479930 GJA3Q9Y6H8 435 aa10.56□□□□□ -0.72
TTC3-216ENST00000479930 CFAP36Q96G28 342 aa10.56□□□□□ -0.72
TTC3-216ENST00000479930 CENPJQ9HC77 1338 aaPredicted RBP10.56□□□□□ -0.72
TTC3-216ENST00000479930 AXDND1Q5T1B0 1012 aaPredicted RBP10.55□□□□□ -0.72
TTC3-216ENST00000479930 FERMT1Q9BQL6 677 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 TNNT1P13805 278 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 SNX16P57768 344 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 FILIP1LQ4L180 1135 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 TAF3Q5VWG9 929 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 CCDC82Q8N4S0 544 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 SMARCE1Q969G3 411 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 ALS2CR12Q96Q35 445 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 VPS37CA5D8V6 355 aaPredicted RBP10.55□□□□□ -0.72
TTC3-216ENST00000479930 TTC36A6NLP5 189 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 JAKMIP3Q5VZ66 844 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 BICD1Q96G01 975 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 TTC30BQ8N4P2 665 aa10.55□□□□□ -0.72
TTC3-216ENST00000479930 NCBP1Q09161 790 aaKnown RBP10.54□□□□□ -0.72
TTC3-216ENST00000479930 RNF216Q9NWF9 866 aaPredicted RBP10.54□□□□□ -0.72
TTC3-216ENST00000479930 HS1BP3Q53T59 392 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 CFAP70Q5T0N1 1121 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
TTC3-216ENST00000479930 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 LARP1Q6PKG0 1096 aaKnown RBP10.54□□□□□ -0.72
TTC3-216ENST00000479930 EHMT1Q9H9B1 1298 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 PPP1R12AO14974 1030 aaPredicted RBP10.54□□□□□ -0.72
TTC3-216ENST00000479930 HOOK3Q86VS8 718 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 CCDC69A6NI79 296 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 NFKBIBQ15653 356 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 GABPAQ06546 454 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 NACA2Q9H009 215 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 CEP83Q9Y592 693 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 PPME1Q9Y570 386 aa10.54□□□□□ -0.72
TTC3-216ENST00000479930 TBC1D12O60347 775 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 PSMC4P43686 418 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 FBXW4P57775 412 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 TMEM259Q4ZIN3 620 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 PFDN4Q9NQP4 134 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 PPFIA1Q13136 1202 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 GPHNQ9NQX3 736 aaPredicted RBP10.53□□□□□ -0.72
TTC3-216ENST00000479930 TRAK1Q9UPV9 953 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 CCDC158Q5M9N0 1113 aa10.53□□□□□ -0.72
TTC3-216ENST00000479930 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
TTC3-216ENST00000479930 DYDC1Q8WWB3 177 aa10.52□□□□□ -0.72
TTC3-216ENST00000479930 SYNDIG1Q9H7V2 258 aa10.52□□□□□ -0.72
TTC3-216ENST00000479930 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 WAPLQ7Z5K2 1190 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 ANKFY1Q9P2R3 1169 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 ATP6V1DQ9Y5K8 247 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 CT47B1P0C2W7 299 aaPredicted RBP10.52□□□□□ -0.73
TTC3-216ENST00000479930 FKBP5Q13451 457 aaPredicted RBP10.52□□□□□ -0.73
TTC3-216ENST00000479930 AAMPQ13685 434 aa10.52□□□□□ -0.73
TTC3-216ENST00000479930 SYNCQ9H7C4 482 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 CCDC57Q2TAC2 916 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 GOLGA6L7A0A1B0GV03 622 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 FCHSD2O94868 740 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 CCDC73Q6ZRK6 1079 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 FAM69CQ0P6D2 419 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 ERCC3P19447 782 aa10.51□□□□□ -0.73
TTC3-216ENST00000479930 GSTTP1A0A1W2PQM5 241 aa10.5□□□□□ -0.73
TTC3-216ENST00000479930 TPD52P55327 224 aaPredicted RBP10.5□□□□□ -0.73
TTC3-216ENST00000479930 STIM1Q13586 685 aa10.5□□□□□ -0.73
TTC3-216ENST00000479930 ERCC5P28715 1186 aaPredicted RBP10.5□□□□□ -0.73
TTC3-216ENST00000479930 FAM193AP78312 1265 aa10.5□□□□□ -0.73
TTC3-216ENST00000479930 DHX8Q14562 1220 aaKnown RBP10.5□□□□□ -0.73
TTC3-216ENST00000479930 KIF5CO60282 957 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms