RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
RFC4-212ENST00000479307 MAP7D1Q3KQU3 841 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 Q6ZNB5 142 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 RNF135Q8IUD6 432 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 PHTF2Q8N3S3 785 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 CHIC2Q9UKJ5 165 aa9.2□□□□□ -0.94
RFC4-212ENST00000479307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.19□□□□□ -0.94
RFC4-212ENST00000479307 PDE4CQ08493 712 aa9.19□□□□□ -0.94
RFC4-212ENST00000479307 FAM174AQ8TBP5 190 aa9.19□□□□□ -0.94
RFC4-212ENST00000479307 USP17L3A6NCW0 530 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 USP17L4A6NCW7 530 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 USP17L5A8MUK1 530 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 USP17L2Q6R6M4 530 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 USP17L1Q7RTZ2 530 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
RFC4-212ENST00000479307 PDIA4P13667 645 aaKnown RBP9.17□□□□□ -0.94
RFC4-212ENST00000479307 SKOR1P84550 965 aa9.17□□□□□ -0.94
RFC4-212ENST00000479307 PLPP7Q8NBV4 271 aa9.17□□□□□ -0.94
RFC4-212ENST00000479307 MAP4K5Q9Y4K4 846 aa9.17□□□□□ -0.94
RFC4-212ENST00000479307 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
RFC4-212ENST00000479307 VRTNQ9H8Y1 702 aa9.16□□□□□ -0.94
RFC4-212ENST00000479307 ESPNB1AK53 854 aa9.15□□□□□ -0.94
RFC4-212ENST00000479307 ATG7O95352 703 aa9.15□□□□□ -0.94
RFC4-212ENST00000479307 RETREG2Q8NC44 543 aa9.15□□□□□ -0.94
RFC4-212ENST00000479307 USTQ9Y2C2 406 aa9.15□□□□□ -0.94
RFC4-212ENST00000479307 ATP5J2-PTCD1G3V325 749 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 GIGYF1O75420 1035 aaPredicted RBP9.14□□□□□ -0.95
RFC4-212ENST00000479307 NCOA4Q13772 614 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 KANK4Q5T7N3 995 aaPredicted RBP9.14□□□□□ -0.95
RFC4-212ENST00000479307 RC3H1Q5TC82 1133 aaKnown RBP9.14□□□□□ -0.95
RFC4-212ENST00000479307 TRAF7Q6Q0C0 670 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 LIAT1Q6ZQX7 453 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 MPNDQ8N594 471 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 TRAIPQ9BWF2 469 aa9.14□□□□□ -0.95
RFC4-212ENST00000479307 CSB-PGBD3P0DP91 1061 aa9.13□□□□□ -0.95
RFC4-212ENST00000479307 SLC19A1P41440 591 aa9.13□□□□□ -0.95
RFC4-212ENST00000479307 EML3Q32P44 896 aa9.13□□□□□ -0.95
RFC4-212ENST00000479307 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
RFC4-212ENST00000479307 DOLKQ9UPQ8 538 aa9.13□□□□□ -0.95
RFC4-212ENST00000479307 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
RFC4-212ENST00000479307 CDK15Q96Q40 435 aa9.12□□□□□ -0.95
RFC4-212ENST00000479307 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
RFC4-212ENST00000479307 FAM196BA6NMK8 535 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 WNT7AO00755 349 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 VASH1Q7L8A9 365 aaPredicted RBP9.11□□□□□ -0.95
RFC4-212ENST00000479307 TRIM50Q86XT4 487 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 DEPDC4Q8N2C3 294 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 EMID1Q96A84 441 aaPredicted RBP9.11□□□□□ -0.95
RFC4-212ENST00000479307 SIRT1Q96EB6 747 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 CCDC85AQ96PX6 553 aaPredicted RBP9.11□□□□□ -0.95
RFC4-212ENST00000479307 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
RFC4-212ENST00000479307 NOD1Q9Y239 953 aa9.11□□□□□ -0.95
RFC4-212ENST00000479307 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
RFC4-212ENST00000479307 USP4Q13107 963 aa9.09□□□□□ -0.95
RFC4-212ENST00000479307 SPRYD7Q5W111 196 aa9.09□□□□□ -0.95
RFC4-212ENST00000479307 CDCA8Q53HL2 280 aa9.08□□□□□ -0.96
RFC4-212ENST00000479307 LARP1Q6PKG0 1096 aaKnown RBP9.08□□□□□ -0.96
RFC4-212ENST00000479307 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L12C9JPN9 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L21D6R901 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 SIAH2O43255 324 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 DHX9Q08211 1270 aaKnown RBP9.07□□□□□ -0.96
RFC4-212ENST00000479307 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 INTS6LQ5JSJ4 861 aaKnown RBP9.07□□□□□ -0.96
RFC4-212ENST00000479307 ZNF598Q86UK7 904 aaKnown RBP9.07□□□□□ -0.96
RFC4-212ENST00000479307 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
RFC4-212ENST00000479307 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
RFC4-212ENST00000479307 RASA1P20936 1047 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 NR5A1Q13285 461 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 ARID5BQ14865 1188 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 TSGA10IPQ3SY00 556 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 OXLD1Q5BKU9 147 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 NOVA2Q9UNW9 492 aaKnown RBP9.06□□□□□ -0.96
RFC4-212ENST00000479307 TLL2Q9Y6L7 1015 aa9.06□□□□□ -0.96
RFC4-212ENST00000479307 ADH1CP00326 375 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 MYCP01106 439 aaPredicted RBP9.05□□□□□ -0.96
RFC4-212ENST00000479307 FSHRP23945 695 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 PTK7Q13308 1070 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 CRTC2Q53ET0 693 aaPredicted RBP9.05□□□□□ -0.96
RFC4-212ENST00000479307 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 LARGE2Q8N3Y3 721 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 OGFOD1Q8N543 542 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 KCTD17Q8N5Z5 321 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
RFC4-212ENST00000479307 GRM5P41594 1212 aa9.04□□□□□ -0.96
RFC4-212ENST00000479307 CDCA7Q9BWT1 371 aaPredicted RBP9.04□□□□□ -0.96
RFC4-212ENST00000479307 DNAAF2Q9NVR5 837 aaKnown RBP9.04□□□□□ -0.96
RFC4-212ENST00000479307 TMEM88BA6NKF7 163 aa9.03□□□□□ -0.96
RFC4-212ENST00000479307 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
RFC4-212ENST00000479307 RAB15P59190 212 aa9.03□□□□□ -0.96
RFC4-212ENST00000479307 GTF2IP78347 998 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms