RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PPP1R26Q5T8A7 1209 aaPredicted RBP8.85□□□□□ -0.99
HPS3-205ENST00000478525 CBLBQ13191 982 aa8.84□□□□□ -0.99
HPS3-205ENST00000478525 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
HPS3-205ENST00000478525 PDXDC2PQ6P474 469 aa8.83□□□□□ -1
HPS3-205ENST00000478525 FKBPLQ9UIM3 349 aa8.83□□□□□ -1
HPS3-205ENST00000478525 TTLL8A6PVC2 850 aa8.82□□□□□ -1
HPS3-205ENST00000478525 SLC10A4Q96EP9 437 aa8.82□□□□□ -1
HPS3-205ENST00000478525 NR6A1Q15406 480 aa8.81□□□□□ -1
HPS3-205ENST00000478525 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.81□□□□□ -1
HPS3-205ENST00000478525 Q6ZVU0 165 aa8.81□□□□□ -1
HPS3-205ENST00000478525 KCTD15Q96SI1 283 aaPredicted RBP8.81□□□□□ -1
HPS3-205ENST00000478525 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
HPS3-205ENST00000478525 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
HPS3-205ENST00000478525 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
HPS3-205ENST00000478525 SH3D19Q5HYK7 790 aa8.8□□□□□ -1
HPS3-205ENST00000478525 PROCA1Q8NCQ7 364 aaPredicted RBP8.8□□□□□ -1
HPS3-205ENST00000478525 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
HPS3-205ENST00000478525 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.8□□□□□ -1
HPS3-205ENST00000478525 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
HPS3-205ENST00000478525 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
HPS3-205ENST00000478525 SPINT1O43278 529 aa8.79□□□□□ -1
HPS3-205ENST00000478525 KRT76Q01546 638 aa8.79□□□□□ -1
HPS3-205ENST00000478525 PTSQ03393 145 aa8.79□□□□□ -1
HPS3-205ENST00000478525 INTS6LQ5JSJ4 861 aaKnown RBP8.79□□□□□ -1
HPS3-205ENST00000478525 CDV3Q9UKY7 258 aaKnown RBP8.79□□□□□ -1
HPS3-205ENST00000478525 PPP2R2DQ66LE6 453 aa8.78□□□□□ -1
HPS3-205ENST00000478525 ZBTB33Q86T24 672 aa8.78□□□□□ -1
HPS3-205ENST00000478525 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
HPS3-205ENST00000478525 KDM4CQ9H3R0 1056 aa8.78□□□□□ -1
HPS3-205ENST00000478525 AGBL1Q96MI9 1066 aa8.77□□□□□ -1.01
HPS3-205ENST00000478525 FAM117AQ9C073 453 aa8.77□□□□□ -1.01
HPS3-205ENST00000478525 DHX9Q08211 1270 aaKnown RBP8.76□□□□□ -1.01
HPS3-205ENST00000478525 ADAM32Q8TC27 787 aa8.76□□□□□ -1.01
HPS3-205ENST00000478525 EPS8L1Q8TE68 723 aa8.76□□□□□ -1.01
HPS3-205ENST00000478525 AP1G2O75843 785 aa8.75□□□□□ -1.01
HPS3-205ENST00000478525 PTK2Q05397 1052 aa8.75□□□□□ -1.01
HPS3-205ENST00000478525 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
HPS3-205ENST00000478525 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
HPS3-205ENST00000478525 CTSOP43234 321 aaPredicted RBP8.74□□□□□ -1.01
HPS3-205ENST00000478525 RELBQ01201 579 aa8.74□□□□□ -1.01
HPS3-205ENST00000478525 DDRGK1Q96HY6 314 aa8.74□□□□□ -1.01
HPS3-205ENST00000478525 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
HPS3-205ENST00000478525 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
HPS3-205ENST00000478525 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
HPS3-205ENST00000478525 GPSM3Q9Y4H4 160 aa8.74□□□□□ -1.01
HPS3-205ENST00000478525 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
HPS3-205ENST00000478525 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
HPS3-205ENST00000478525 SLC35F4A4IF30 521 aa8.72□□□□□ -1.01
HPS3-205ENST00000478525 USP17L8P0C7I0 530 aa8.72□□□□□ -1.01
HPS3-205ENST00000478525 NANOS1Q8WY41 292 aaKnown RBP8.72□□□□□ -1.01
HPS3-205ENST00000478525 COL25A1Q9BXS0 654 aaPredicted RBP8.72□□□□□ -1.01
HPS3-205ENST00000478525 RAB15P59190 212 aa8.71□□□□□ -1.02
HPS3-205ENST00000478525 NBPF20Q3BBV1 942 aa8.71□□□□□ -1.02
HPS3-205ENST00000478525 RNFT1Q5M7Z0 435 aa8.71□□□□□ -1.02
HPS3-205ENST00000478525 ZNF784Q8NCA9 323 aaPredicted RBP8.71□□□□□ -1.02
HPS3-205ENST00000478525 GSK3AP49840 483 aa8.7□□□□□ -1.02
HPS3-205ENST00000478525 RNF217Q8TC41 542 aa8.7□□□□□ -1.02
HPS3-205ENST00000478525 ZNF395Q9H8N7 513 aaPredicted RBP8.7□□□□□ -1.02
HPS3-205ENST00000478525 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
HPS3-205ENST00000478525 ITGA6P23229 1130 aa8.69□□□□□ -1.02
HPS3-205ENST00000478525 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
HPS3-205ENST00000478525 LILRA1O75019 489 aa8.68□□□□□ -1.02
HPS3-205ENST00000478525 ADH1AP07327 375 aa8.68□□□□□ -1.02
HPS3-205ENST00000478525 SENP3-EIF4A1A0A087X0R7 540 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 CDC14CA4D256 554 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 RFC5P40937 340 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 FOXD4L5Q5VV16 416 aaPredicted RBP8.67□□□□□ -1.02
HPS3-205ENST00000478525 DZIP3Q86Y13 1208 aaKnown RBP8.67□□□□□ -1.02
HPS3-205ENST00000478525 VWA5B2Q8N398 1253 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 KDF1Q8NAX2 398 aaPredicted RBP8.67□□□□□ -1.02
HPS3-205ENST00000478525 PNMA1Q8ND90 353 aa8.67□□□□□ -1.02
HPS3-205ENST00000478525 ESPNB1AK53 854 aa8.66□□□□□ -1.02
HPS3-205ENST00000478525 ADD1P35611 737 aaKnown RBP8.66□□□□□ -1.02
HPS3-205ENST00000478525 SUZ12Q15022 739 aaKnown RBP8.66□□□□□ -1.02
HPS3-205ENST00000478525 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
HPS3-205ENST00000478525 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
HPS3-205ENST00000478525 ADAMTS8Q9UP79 889 aa8.65□□□□□ -1.02
HPS3-205ENST00000478525 PTGIRP43119 386 aa8.64□□□□□ -1.03
HPS3-205ENST00000478525 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
HPS3-205ENST00000478525 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
HPS3-205ENST00000478525 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
HPS3-205ENST00000478525 SLURP2P0DP57 97 aa8.63□□□□□ -1.03
HPS3-205ENST00000478525 SVOPQ8N4V2 548 aa8.63□□□□□ -1.03
HPS3-205ENST00000478525 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
HPS3-205ENST00000478525 RASSF7Q02833 373 aa8.61□□□□□ -1.03
HPS3-205ENST00000478525 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
HPS3-205ENST00000478525 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
HPS3-205ENST00000478525 SEPT12Q8IYM1 358 aa8.6□□□□□ -1.03
HPS3-205ENST00000478525 TMEM151AQ8N4L1 468 aa8.6□□□□□ -1.03
HPS3-205ENST00000478525 ARHGEF15O94989 841 aa8.59□□□□□ -1.03
HPS3-205ENST00000478525 GDF11O95390 407 aa8.59□□□□□ -1.03
HPS3-205ENST00000478525 LYSMD3Q7Z3D4 306 aa8.59□□□□□ -1.03
HPS3-205ENST00000478525 RHOQP17081 205 aa8.58□□□□□ -1.04
HPS3-205ENST00000478525 GAS6Q14393 721 aa8.58□□□□□ -1.04
HPS3-205ENST00000478525 PCDHB9Q9Y5E1 797 aa8.58□□□□□ -1.04
HPS3-205ENST00000478525 ZBBXA8MT70 800 aa8.57□□□□□ -1.04
HPS3-205ENST00000478525 GIGYF1O75420 1035 aaPredicted RBP8.57□□□□□ -1.04
HPS3-205ENST00000478525 ADAMTS2O95450 1211 aa8.57□□□□□ -1.04
HPS3-205ENST00000478525 FBXO45P0C2W1 286 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms