RNA–Protein interactions for RNA: ENST00000477375.5

IMP4-215, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-215ENST00000477375 COL5A2P05997 1499 aaPredicted RBP24.12■■□□□ 1.45
IMP4-215ENST00000477375 KIF7Q2M1P5 1343 aa24.11■■□□□ 1.45
IMP4-215ENST00000477375 EVA1CP58658 441 aa24.1■■□□□ 1.45
IMP4-215ENST00000477375 LARP1Q6PKG0 1096 aaKnown RBP24.1■■□□□ 1.45
IMP4-215ENST00000477375 ANKRD26Q9UPS8 1709 aa24.09■■□□□ 1.45
IMP4-215ENST00000477375 COG3Q96JB2 828 aa24.08■■□□□ 1.45
IMP4-215ENST00000477375 PANK3Q9H999 370 aa24.08■■□□□ 1.45
IMP4-215ENST00000477375 SPATA31A1Q5TZJ5 1347 aa24.08■■□□□ 1.44
IMP4-215ENST00000477375 ONECUT3O60422 494 aaPredicted RBP24.07■■□□□ 1.44
IMP4-215ENST00000477375 FAM98CQ17RN3 349 aaKnown RBP24.07■■□□□ 1.44
IMP4-215ENST00000477375 THSD7AQ9UPZ6 1657 aa24.07■■□□□ 1.44
IMP4-215ENST00000477375 MAP2P11137 1827 aaKnown RBP24.07■■□□□ 1.44
IMP4-215ENST00000477375 SEPT12Q8IYM1 358 aa24.05■■□□□ 1.44
IMP4-215ENST00000477375 USP35Q9P2H5 1018 aa24.05■■□□□ 1.44
IMP4-215ENST00000477375 RGPD2P0DJD1 1756 aa24.05■■□□□ 1.44
IMP4-215ENST00000477375 WNK3Q9BYP7 1800 aa24.05■■□□□ 1.44
IMP4-215ENST00000477375 ABCC6O95255 1503 aa24.04■■□□□ 1.44
IMP4-215ENST00000477375 PEAK1Q9H792 1746 aa24.02■■□□□ 1.44
IMP4-215ENST00000477375 WASHC2AQ641Q2 1341 aa24.02■■□□□ 1.44
IMP4-215ENST00000477375 CCDC7Q96M83 1385 aa24.02■■□□□ 1.44
IMP4-215ENST00000477375 MAP3K19Q56UN5 1328 aa24.01■■□□□ 1.43
IMP4-215ENST00000477375 CRB1P82279 1406 aa24.01■■□□□ 1.43
IMP4-215ENST00000477375 RRS1Q15050 365 aaKnown RBP23.99■■□□□ 1.43
IMP4-215ENST00000477375 WDR17Q8IZU2 1322 aa23.99■■□□□ 1.43
IMP4-215ENST00000477375 A0A0G2JS52 829 aa23.98■■□□□ 1.43
IMP4-215ENST00000477375 MYT1Q01538 1121 aa23.98■■□□□ 1.43
IMP4-215ENST00000477375 UPF1Q92900 1129 aaKnown RBP eCLIP23.98■■□□□ 1.43
IMP4-215ENST00000477375 CGNL1Q0VF96 1302 aa23.98■■□□□ 1.43
IMP4-215ENST00000477375 TOM1L2Q6ZVM7 507 aa23.97■■□□□ 1.43
IMP4-215ENST00000477375 TCP11L2Q8N4U5 519 aa23.97■■□□□ 1.43
IMP4-215ENST00000477375 IP6K1Q92551 441 aa23.97■■□□□ 1.43
IMP4-215ENST00000477375 PARP4Q9UKK3 1724 aaKnown RBP23.97■■□□□ 1.43
IMP4-215ENST00000477375 BARGINQ6ZT62 677 aa23.96■■□□□ 1.43
IMP4-215ENST00000477375 CSB-PGBD3P0DP91 1061 aa23.95■■□□□ 1.42
IMP4-215ENST00000477375 ERBB3P21860 1342 aa23.94■■□□□ 1.42
IMP4-215ENST00000477375 HOXC9P31274 260 aa23.94■■□□□ 1.42
IMP4-215ENST00000477375 ANKRD24Q8TF21 1146 aa23.94■■□□□ 1.42
IMP4-215ENST00000477375 FAM208AQ9UK61 1670 aaKnown RBP23.93■■□□□ 1.42
IMP4-215ENST00000477375 FAM182BQ5T319 152 aa23.93■■□□□ 1.42
IMP4-215ENST00000477375 KRT27Q7Z3Y8 459 aa23.93■■□□□ 1.42
IMP4-215ENST00000477375 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
IMP4-215ENST00000477375 LRRC37A3O60309 1634 aa23.92■■□□□ 1.42
IMP4-215ENST00000477375 AMPHP49418 695 aa23.92■■□□□ 1.42
IMP4-215ENST00000477375 LTV1Q96GA3 475 aaPredicted RBP23.92■■□□□ 1.42
IMP4-215ENST00000477375 THRAP3Q9Y2W1 955 aaKnown RBP23.92■■□□□ 1.42
IMP4-215ENST00000477375 CARD10Q9BWT7 1032 aa23.91■■□□□ 1.42
IMP4-215ENST00000477375 PER1O15534 1290 aaPredicted RBP23.9■■□□□ 1.42
IMP4-215ENST00000477375 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
IMP4-215ENST00000477375 ZEB1P37275 1124 aaPredicted RBP23.89■■□□□ 1.41
IMP4-215ENST00000477375 TNNT2P45379 298 aaPredicted RBP23.89■■□□□ 1.41
IMP4-215ENST00000477375 EP400Q96L91 3159 aa23.88■■□□□ 1.41
IMP4-215ENST00000477375 AMER1Q5JTC6 1135 aaPredicted RBP23.88■■□□□ 1.41
IMP4-215ENST00000477375 NLRP2Q9NX02 1062 aa23.88■■□□□ 1.41
IMP4-215ENST00000477375 KNSTRNQ9Y448 316 aa23.88■■□□□ 1.41
IMP4-215ENST00000477375 RTL1A6NKG5 1358 aa23.88■■□□□ 1.41
IMP4-215ENST00000477375 DISP2A7MBM2 1401 aa23.87■■□□□ 1.41
IMP4-215ENST00000477375 HSP90AB2PQ58FF8 381 aa23.87■■□□□ 1.41
IMP4-215ENST00000477375 POLKQ9UBT6 870 aa23.85■■□□□ 1.41
IMP4-215ENST00000477375 NSD2O96028 1365 aa23.85■■□□□ 1.41
IMP4-215ENST00000477375 SBF2Q86WG5 1849 aa23.84■■□□□ 1.41
IMP4-215ENST00000477375 INSRP06213 1382 aa23.83■■□□□ 1.41
IMP4-215ENST00000477375 FLT4P35916 1363 aa23.83■■□□□ 1.41
IMP4-215ENST00000477375 PPM1GO15355 546 aaPredicted RBP23.83■■□□□ 1.41
IMP4-215ENST00000477375 MORC1Q86VD1 984 aa23.82■■□□□ 1.4
IMP4-215ENST00000477375 KIF24Q5T7B8 1368 aa23.81■■□□□ 1.4
IMP4-215ENST00000477375 TNS1Q9HBL0 1735 aaKnown RBP23.81■■□□□ 1.4
IMP4-215ENST00000477375 RGPD1P0DJD0 1748 aa23.8■■□□□ 1.4
IMP4-215ENST00000477375 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
IMP4-215ENST00000477375 NBPF6Q5VWK0 638 aa23.8■■□□□ 1.4
IMP4-215ENST00000477375 NBPF4Q96M43 638 aa23.8■■□□□ 1.4
IMP4-215ENST00000477375 CC2D1BQ5T0F9 858 aaKnown RBP23.79■■□□□ 1.4
IMP4-215ENST00000477375 SHANK3Q9BYB0 1731 aa23.79■■□□□ 1.4
IMP4-215ENST00000477375 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
IMP4-215ENST00000477375 DDB1Q16531 1140 aa23.78■■□□□ 1.4
IMP4-215ENST00000477375 USHBP1Q8N6Y0 703 aa23.78■■□□□ 1.4
IMP4-215ENST00000477375 KAT6BQ8WYB5 2073 aa23.78■■□□□ 1.4
IMP4-215ENST00000477375 IL2RBP14784 551 aa23.76■■□□□ 1.39
IMP4-215ENST00000477375 MARCH10Q8NA82 808 aaPredicted RBP23.76■■□□□ 1.39
IMP4-215ENST00000477375 CDCA7Q9BWT1 371 aaPredicted RBP23.76■■□□□ 1.39
IMP4-215ENST00000477375 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
IMP4-215ENST00000477375 TNS2Q63HR2 1409 aa23.74■■□□□ 1.39
IMP4-215ENST00000477375 MEGF6O75095 1541 aa23.74■■□□□ 1.39
IMP4-215ENST00000477375 EXOC5O00471 708 aa23.73■■□□□ 1.39
IMP4-215ENST00000477375 FAM196AQ6ZSG2 479 aa23.73■■□□□ 1.39
IMP4-215ENST00000477375 DEFB132Q7Z7B7 95 aa23.72■■□□□ 1.39
IMP4-215ENST00000477375 CCDC125Q86Z20 511 aa23.72■■□□□ 1.39
IMP4-215ENST00000477375 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
IMP4-215ENST00000477375 TRIM37O94972 964 aa23.71■■□□□ 1.39
IMP4-215ENST00000477375 EIF4A2Q14240 407 aaKnown RBP23.71■■□□□ 1.39
IMP4-215ENST00000477375 OVOS2A0A0G2JMS6 1433 aa23.7■■□□□ 1.38
IMP4-215ENST00000477375 EYA1Q99502 592 aa23.69■■□□□ 1.38
IMP4-215ENST00000477375 NCAPD2Q15021 1401 aa23.68■■□□□ 1.38
IMP4-215ENST00000477375 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
IMP4-215ENST00000477375 MTHFSP49914 203 aa23.66■■□□□ 1.38
IMP4-215ENST00000477375 PKD1L3Q7Z443 1732 aa23.66■■□□□ 1.38
IMP4-215ENST00000477375 SF3B2Q13435 895 aaKnown RBP23.64■■□□□ 1.37
IMP4-215ENST00000477375 DDX54Q8TDD1 881 aaKnown RBP23.63■■□□□ 1.37
IMP4-215ENST00000477375 NHSQ6T4R5 1651 aa23.63■■□□□ 1.37
IMP4-215ENST00000477375 DOT1LQ8TEK3 1739 aa23.62■■□□□ 1.37
IMP4-215ENST00000477375 BCL9O00512 1426 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms